EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000017325 (Gene tree)
Gene ID: 109997834
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5622 bases
Position: chrFKLU01000012.1:1589163-1594784
Accession: 109997834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022598	zf-C3HC	PF07967.13	1.1e-33	1	1
ENSLBEP00000022588	zf-C3HC	PF07967.13	1.3e-33	1	1
ENSLBEP00000022588	Rsm1	PF08600.10	1e-11	1	1
ENSLBEP00000022598	Rsm1	PF08600.10	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023769	-	3306	XM_020652455	ENSLBEP00000022588	504 (aa)	XP_020508111	UPI0009B37E1B
ENSLBET00000023780	-	2790	-	ENSLBEP00000022598	474 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000017325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017325	zc3hc1	95	43.366	ENSG00000091732	ZC3HC1	94	45.506	Homo_sapiens
ENSLBEG00000017325	zc3hc1	99	76.143	ENSAPOG00000009078	zc3hc1	99	76.143	Acanthochromis_polyacanthus
ENSLBEG00000017325	zc3hc1	95	43.340	ENSAMEG00000005425	ZC3HC1	95	43.912	Ailuropoda_melanoleuca
ENSLBEG00000017325	zc3hc1	100	72.584	ENSACIG00000019513	zc3hc1	100	72.584	Amphilophus_citrinellus
ENSLBEG00000017325	zc3hc1	99	75.944	ENSAOCG00000024310	zc3hc1	99	75.944	Amphiprion_ocellaris
ENSLBEG00000017325	zc3hc1	99	75.348	ENSAPEG00000004907	zc3hc1	99	75.348	Amphiprion_percula
ENSLBEG00000017325	zc3hc1	93	76.244	ENSATEG00000016898	zc3hc1	91	76.244	Anabas_testudineus
ENSLBEG00000017325	zc3hc1	93	42.358	ENSAPLG00000003832	ZC3HC1	97	43.231	Anas_platyrhynchos
ENSLBEG00000017325	zc3hc1	95	42.940	ENSACAG00000001638	ZC3HC1	95	42.940	Anolis_carolinensis
ENSLBEG00000017325	zc3hc1	95	40.990	ENSANAG00000022213	ZC3HC1	94	44.225	Aotus_nancymaae
ENSLBEG00000017325	zc3hc1	97	74.672	ENSACLG00000025033	zc3hc1	99	74.672	Astatotilapia_calliptera
ENSLBEG00000017325	zc3hc1	95	51.867	ENSAMXG00000036792	zc3hc1	97	51.867	Astyanax_mexicanus
ENSLBEG00000017325	zc3hc1	95	44.118	ENSBTAG00000011247	ZC3HC1	95	45.079	Bos_taurus
ENSLBEG00000017325	zc3hc1	95	43.281	ENSCJAG00000010536	ZC3HC1	94	45.352	Callithrix_jacchus
ENSLBEG00000017325	zc3hc1	95	43.625	ENSCAFG00000029401	-	93	44.112	Canis_familiaris
ENSLBEG00000017325	zc3hc1	95	44.024	ENSCAFG00000031850	-	95	44.511	Canis_familiaris
ENSLBEG00000017325	zc3hc1	95	43.762	ENSCAFG00000001499	-	93	44.246	Canis_familiaris
ENSLBEG00000017325	zc3hc1	95	43.625	ENSCAFG00000028735	-	95	44.112	Canis_familiaris
ENSLBEG00000017325	zc3hc1	95	43.825	ENSCAFG00020006829	-	95	44.311	Canis_lupus_dingo
ENSLBEG00000017325	zc3hc1	95	42.857	ENSCAFG00020023333	-	95	43.340	Canis_lupus_dingo
ENSLBEG00000017325	zc3hc1	95	39.844	ENSCHIG00000014103	ZC3HC1	94	40.472	Capra_hircus
ENSLBEG00000017325	zc3hc1	95	42.209	ENSTSYG00000002843	ZC3HC1	94	44.101	Carlito_syrichta
ENSLBEG00000017325	zc3hc1	92	37.168	ENSCAPG00000016300	ZC3HC1	93	37.168	Cavia_aperea
ENSLBEG00000017325	zc3hc1	95	43.713	ENSCPOG00000014034	ZC3HC1	94	47.305	Cavia_porcellus
ENSLBEG00000017325	zc3hc1	95	31.928	ENSCCAG00000020384	ZC3HC1	98	36.948	Cebus_capucinus
ENSLBEG00000017325	zc3hc1	95	43.366	ENSCATG00000023130	ZC3HC1	94	45.658	Cercocebus_atys
ENSLBEG00000017325	zc3hc1	87	31.354	ENSCLAG00000008260	ZC3HC1	87	32.304	Chinchilla_lanigera
ENSLBEG00000017325	zc3hc1	78	40.155	ENSCSAG00000009881	ZC3HC1	96	40.885	Chlorocebus_sabaeus
ENSLBEG00000017325	zc3hc1	92	45.733	ENSCHOG00000011846	ZC3HC1	94	45.733	Choloepus_hoffmanni
ENSLBEG00000017325	zc3hc1	97	43.195	ENSCPBG00000017519	ZC3HC1	97	44.181	Chrysemys_picta_bellii
ENSLBEG00000017325	zc3hc1	95	43.366	ENSCANG00000029091	ZC3HC1	94	45.506	Colobus_angolensis_palliatus
ENSLBEG00000017325	zc3hc1	95	43.114	ENSCGRG00001018805	Zc3hc1	94	45.481	Cricetulus_griseus_chok1gshd
ENSLBEG00000017325	zc3hc1	95	42.116	ENSCGRG00000017114	Zc3hc1	95	42.116	Cricetulus_griseus_crigri
ENSLBEG00000017325	zc3hc1	100	70.450	ENSCSEG00000009284	zc3hc1	98	70.450	Cynoglossus_semilaevis
ENSLBEG00000017325	zc3hc1	99	64.671	ENSCVAG00000011566	zc3hc1	99	64.671	Cyprinodon_variegatus
ENSLBEG00000017325	zc3hc1	99	58.696	ENSDARG00000062651	zc3hc1	99	58.696	Danio_rerio
ENSLBEG00000017325	zc3hc1	95	43.487	ENSDNOG00000045016	ZC3HC1	95	43.058	Dasypus_novemcinctus
ENSLBEG00000017325	zc3hc1	88	43.964	ENSDORG00000008697	Zc3hc1	86	47.203	Dipodomys_ordii
ENSLBEG00000017325	zc3hc1	92	45.354	ENSEASG00005008789	ZC3HC1	91	46.102	Equus_asinus_asinus
ENSLBEG00000017325	zc3hc1	95	43.444	ENSECAG00000017886	ZC3HC1	95	44.314	Equus_caballus
ENSLBEG00000017325	zc3hc1	68	49.123	ENSEEUG00000003123	ZC3HC1	65	50.000	Erinaceus_europaeus
ENSLBEG00000017325	zc3hc1	99	58.755	ENSELUG00000023168	zc3hc1	100	59.339	Esox_lucius
ENSLBEG00000017325	zc3hc1	95	43.313	ENSFCAG00000010429	ZC3HC1	94	45.304	Felis_catus
ENSLBEG00000017325	zc3hc1	92	43.573	ENSFALG00000005006	ZC3HC1	95	43.791	Ficedula_albicollis
ENSLBEG00000017325	zc3hc1	95	43.912	ENSFDAG00000019897	ZC3HC1	94	46.459	Fukomys_damarensis
ENSLBEG00000017325	zc3hc1	99	67.864	ENSFHEG00000020149	zc3hc1	99	67.864	Fundulus_heteroclitus
ENSLBEG00000017325	zc3hc1	99	64.554	ENSGMOG00000002914	zc3hc1	100	65.737	Gadus_morhua
ENSLBEG00000017325	zc3hc1	96	41.617	ENSGALG00000008003	ZC3HC1	98	41.617	Gallus_gallus
ENSLBEG00000017325	zc3hc1	99	68.064	ENSGAFG00000016095	zc3hc1	99	68.064	Gambusia_affinis
ENSLBEG00000017325	zc3hc1	99	74.148	ENSGACG00000019706	zc3hc1	99	74.148	Gasterosteus_aculeatus
ENSLBEG00000017325	zc3hc1	82	43.276	ENSGAGG00000016106	ZC3HC1	99	44.499	Gopherus_agassizii
ENSLBEG00000017325	zc3hc1	95	43.366	ENSGGOG00000015504	ZC3HC1	94	45.506	Gorilla_gorilla
ENSLBEG00000017325	zc3hc1	100	75.198	ENSHBUG00000008347	zc3hc1	100	75.198	Haplochromis_burtoni
ENSLBEG00000017325	zc3hc1	95	43.625	ENSHGLG00000005085	ZC3HC1	94	45.892	Heterocephalus_glaber_female
ENSLBEG00000017325	zc3hc1	95	43.713	ENSHGLG00100011395	ZC3HC1	94	45.892	Heterocephalus_glaber_male
ENSLBEG00000017325	zc3hc1	99	66.335	ENSHCOG00000014309	zc3hc1	99	66.135	Hippocampus_comes
ENSLBEG00000017325	zc3hc1	95	43.114	ENSSTOG00000023599	-	95	43.200	Ictidomys_tridecemlineatus
ENSLBEG00000017325	zc3hc1	100	70.238	ENSKMAG00000015315	zc3hc1	93	70.238	Kryptolebias_marmoratus
ENSLBEG00000017325	zc3hc1	80	43.981	ENSLACG00000013032	ZC3HC1	98	43.981	Latimeria_chalumnae
ENSLBEG00000017325	zc3hc1	99	52.242	ENSLOCG00000015963	zc3hc1	99	52.242	Lepisosteus_oculatus
ENSLBEG00000017325	zc3hc1	95	42.744	ENSLAFG00000001292	ZC3HC1	95	43.340	Loxodonta_africana
ENSLBEG00000017325	zc3hc1	95	43.366	ENSMFAG00000030176	ZC3HC1	94	45.658	Macaca_fascicularis
ENSLBEG00000017325	zc3hc1	95	42.688	ENSMMUG00000006155	ZC3HC1	94	45.658	Macaca_mulatta
ENSLBEG00000017325	zc3hc1	95	43.366	ENSMNEG00000011833	ZC3HC1	94	45.658	Macaca_nemestrina
ENSLBEG00000017325	zc3hc1	95	43.366	ENSMLEG00000027328	ZC3HC1	94	45.658	Mandrillus_leucophaeus
ENSLBEG00000017325	zc3hc1	100	77.822	ENSMAMG00000010691	zc3hc1	100	77.822	Mastacembelus_armatus
ENSLBEG00000017325	zc3hc1	100	75.000	ENSMZEG00005007142	zc3hc1	100	75.000	Maylandia_zebra
ENSLBEG00000017325	zc3hc1	96	40.194	ENSMGAG00000002977	ZC3HC1	97	41.359	Meleagris_gallopavo
ENSLBEG00000017325	zc3hc1	87	41.121	ENSMAUG00000017032	Zc3hc1	90	41.589	Mesocricetus_auratus
ENSLBEG00000017325	zc3hc1	95	44.071	ENSMICG00000009167	ZC3HC1	94	45.098	Microcebus_murinus
ENSLBEG00000017325	zc3hc1	95	42.685	ENSMOCG00000015239	Zc3hc1	94	46.334	Microtus_ochrogaster
ENSLBEG00000017325	zc3hc1	93	72.584	ENSMMOG00000002204	zc3hc1	99	72.584	Mola_mola
ENSLBEG00000017325	zc3hc1	97	33.585	ENSMODG00000014630	ZC3HC1	96	33.829	Monodelphis_domestica
ENSLBEG00000017325	zc3hc1	98	77.328	ENSMALG00000014447	zc3hc1	100	77.183	Monopterus_albus
ENSLBEG00000017325	zc3hc1	96	43.849	MGP_CAROLIEiJ_G0028183	Zc3hc1	94	45.748	Mus_caroli
ENSLBEG00000017325	zc3hc1	96	42.460	ENSMUSG00000039130	Zc3hc1	94	45.161	Mus_musculus
ENSLBEG00000017325	zc3hc1	96	40.351	MGP_PahariEiJ_G0021941	Zc3hc1	95	41.758	Mus_pahari
ENSLBEG00000017325	zc3hc1	96	42.460	MGP_SPRETEiJ_G0029183	Zc3hc1	94	45.161	Mus_spretus
ENSLBEG00000017325	zc3hc1	90	43.697	ENSMPUG00000005297	ZC3HC1	89	44.538	Mustela_putorius_furo
ENSLBEG00000017325	zc3hc1	95	44.000	ENSMLUG00000000063	-	95	44.489	Myotis_lucifugus
ENSLBEG00000017325	zc3hc1	72	38.440	ENSMLUG00000029228	-	98	39.106	Myotis_lucifugus
ENSLBEG00000017325	zc3hc1	95	44.200	ENSNGAG00000019014	Zc3hc1	95	45.291	Nannospalax_galili
ENSLBEG00000017325	zc3hc1	100	74.603	ENSNBRG00000004577	zc3hc1	100	74.603	Neolamprologus_brichardi
ENSLBEG00000017325	zc3hc1	94	43.687	ENSNLEG00000012698	ZC3HC1	93	46.000	Nomascus_leucogenys
ENSLBEG00000017325	zc3hc1	95	44.355	ENSMEUG00000011023	ZC3HC1	95	44.355	Notamacropus_eugenii
ENSLBEG00000017325	zc3hc1	57	46.721	ENSOPRG00000007867	-	61	48.560	Ochotona_princeps
ENSLBEG00000017325	zc3hc1	95	43.513	ENSODEG00000014604	ZC3HC1	95	43.888	Octodon_degus
ENSLBEG00000017325	zc3hc1	100	75.198	ENSONIG00000011644	zc3hc1	100	75.198	Oreochromis_niloticus
ENSLBEG00000017325	zc3hc1	93	41.090	ENSOANG00000011460	ZC3HC1	95	41.090	Ornithorhynchus_anatinus
ENSLBEG00000017325	zc3hc1	95	42.970	ENSOCUG00000017137	ZC3HC1	95	43.625	Oryctolagus_cuniculus
ENSLBEG00000017325	zc3hc1	99	71.084	ENSORLG00000014409	zc3hc1	98	71.058	Oryzias_latipes
ENSLBEG00000017325	zc3hc1	99	71.486	ENSORLG00020015874	zc3hc1	98	71.457	Oryzias_latipes_hni
ENSLBEG00000017325	zc3hc1	99	70.683	ENSORLG00015014641	zc3hc1	98	70.659	Oryzias_latipes_hsok
ENSLBEG00000017325	zc3hc1	99	70.884	ENSOMEG00000020604	zc3hc1	98	70.800	Oryzias_melastigma
ENSLBEG00000017325	zc3hc1	99	71.084	ENSOMEG00000000215	zc3hc1	98	71.000	Oryzias_melastigma
ENSLBEG00000017325	zc3hc1	95	38.067	ENSOGAG00000026193	ZC3HC1	95	39.286	Otolemur_garnettii
ENSLBEG00000017325	zc3hc1	95	43.580	ENSOARG00000004907	ZC3HC1	93	44.227	Ovis_aries
ENSLBEG00000017325	zc3hc1	95	43.366	ENSPPAG00000043172	ZC3HC1	94	45.506	Pan_paniscus
ENSLBEG00000017325	zc3hc1	95	43.114	ENSPPRG00000001004	ZC3HC1	94	45.028	Panthera_pardus
ENSLBEG00000017325	zc3hc1	95	43.313	ENSPTIG00000007823	ZC3HC1	94	45.304	Panthera_tigris_altaica
ENSLBEG00000017325	zc3hc1	95	43.366	ENSPTRG00000019685	ZC3HC1	94	45.506	Pan_troglodytes
ENSLBEG00000017325	zc3hc1	95	42.292	ENSPANG00000014229	ZC3HC1	94	45.658	Papio_anubis
ENSLBEG00000017325	zc3hc1	99	50.877	ENSPKIG00000007172	zc3hc1	99	50.877	Paramormyrops_kingsleyae
ENSLBEG00000017325	zc3hc1	92	40.611	ENSPSIG00000016646	ZC3HC1	86	42.549	Pelodiscus_sinensis
ENSLBEG00000017325	zc3hc1	99	62.970	ENSPMGG00000003548	zc3hc1	98	63.366	Periophthalmus_magnuspinnatus
ENSLBEG00000017325	zc3hc1	95	40.927	ENSPEMG00000000514	Zc3hc1	94	43.658	Peromyscus_maniculatus_bairdii
ENSLBEG00000017325	zc3hc1	95	43.086	ENSPCIG00000020619	ZC3HC1	99	44.828	Phascolarctos_cinereus
ENSLBEG00000017325	zc3hc1	99	68.064	ENSPFOG00000003466	zc3hc1	99	68.064	Poecilia_formosa
ENSLBEG00000017325	zc3hc1	99	68.064	ENSPLAG00000022211	zc3hc1	99	68.064	Poecilia_latipinna
ENSLBEG00000017325	zc3hc1	99	68.463	ENSPMEG00000001458	zc3hc1	99	68.463	Poecilia_mexicana
ENSLBEG00000017325	zc3hc1	99	67.864	ENSPREG00000004004	zc3hc1	99	67.864	Poecilia_reticulata
ENSLBEG00000017325	zc3hc1	95	40.079	ENSPPYG00000017998	ZC3HC1	95	40.954	Pongo_abelii
ENSLBEG00000017325	zc3hc1	92	44.124	ENSPCAG00000001182	ZC3HC1	93	44.543	Procavia_capensis
ENSLBEG00000017325	zc3hc1	95	43.366	ENSPCOG00000017354	ZC3HC1	94	44.818	Propithecus_coquereli
ENSLBEG00000017325	zc3hc1	95	40.606	ENSPVAG00000003195	ZC3HC1	95	40.726	Pteropus_vampyrus
ENSLBEG00000017325	zc3hc1	100	75.000	ENSPNYG00000020692	zc3hc1	100	75.000	Pundamilia_nyererei
ENSLBEG00000017325	zc3hc1	98	50.000	ENSPNAG00000020746	zc3hc1	100	50.000	Pygocentrus_nattereri
ENSLBEG00000017325	zc3hc1	95	42.063	ENSRNOG00000010154	Zc3hc1	95	42.063	Rattus_norvegicus
ENSLBEG00000017325	zc3hc1	92	45.374	ENSRBIG00000029409	ZC3HC1	94	48.852	Rhinopithecus_bieti
ENSLBEG00000017325	zc3hc1	95	43.366	ENSRROG00000041831	ZC3HC1	94	45.658	Rhinopithecus_roxellana
ENSLBEG00000017325	zc3hc1	80	70.000	ENSSBOG00000032787	ZC3HC1	84	62.069	Saimiri_boliviensis_boliviensis
ENSLBEG00000017325	zc3hc1	92	44.956	ENSSHAG00000002529	ZC3HC1	92	44.956	Sarcophilus_harrisii
ENSLBEG00000017325	zc3hc1	99	52.632	ENSSFOG00015003667	zc3hc1	95	52.632	Scleropages_formosus
ENSLBEG00000017325	zc3hc1	100	76.832	ENSSMAG00000000647	zc3hc1	90	76.832	Scophthalmus_maximus
ENSLBEG00000017325	zc3hc1	100	78.373	ENSSDUG00000004241	zc3hc1	98	78.373	Seriola_dumerili
ENSLBEG00000017325	zc3hc1	100	78.571	ENSSLDG00000025056	zc3hc1	98	78.571	Seriola_lalandi_dorsalis
ENSLBEG00000017325	zc3hc1	95	39.321	ENSSARG00000012013	ZC3HC1	95	39.920	Sorex_araneus
ENSLBEG00000017325	zc3hc1	87	40.376	ENSSPUG00000000778	ZC3HC1	80	40.094	Sphenodon_punctatus
ENSLBEG00000017325	zc3hc1	99	77.336	ENSSPAG00000020041	zc3hc1	99	77.336	Stegastes_partitus
ENSLBEG00000017325	zc3hc1	95	43.173	ENSSSCG00000016565	ZC3HC1	99	43.842	Sus_scrofa
ENSLBEG00000017325	zc3hc1	53	34.351	ENSTGUG00000016262	ZC3HC1	97	34.351	Taeniopygia_guttata
ENSLBEG00000017325	zc3hc1	99	65.800	ENSTRUG00000020077	zc3hc1	99	65.800	Takifugu_rubripes
ENSLBEG00000017325	zc3hc1	99	66.601	ENSTNIG00000007585	zc3hc1	100	66.601	Tetraodon_nigroviridis
ENSLBEG00000017325	zc3hc1	95	36.400	ENSTBEG00000005216	ZC3HC1	95	36.874	Tupaia_belangeri
ENSLBEG00000017325	zc3hc1	92	46.018	ENSTTRG00000008458	ZC3HC1	98	44.355	Tursiops_truncatus
ENSLBEG00000017325	zc3hc1	95	43.600	ENSUAMG00000020249	ZC3HC1	95	44.177	Ursus_americanus
ENSLBEG00000017325	zc3hc1	95	43.400	ENSUMAG00000009268	ZC3HC1	95	43.976	Ursus_maritimus
ENSLBEG00000017325	zc3hc1	64	40.181	ENSVPAG00000010846	ZC3HC1	62	41.515	Vicugna_pacos
ENSLBEG00000017325	zc3hc1	90	44.235	ENSVVUG00000012386	ZC3HC1	94	44.748	Vulpes_vulpes
ENSLBEG00000017325	zc3hc1	90	40.295	ENSXETG00000033900	zc3hc1	94	40.295	Xenopus_tropicalis
ENSLBEG00000017325	zc3hc1	99	66.068	ENSXCOG00000013570	zc3hc1	99	66.068	Xiphophorus_couchianus
ENSLBEG00000017325	zc3hc1	98	66.882	ENSXMAG00000010979	zc3hc1	99	66.882	Xiphophorus_maculatus