EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000017345 (Gene tree)
Gene ID: 109997116
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2552 bases
Position: chrFKLU01000401.1:84922-87473
Accession: 109997116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022610	RRM_1	PF00076.22	4.2e-11	1	1
ENSLBEP00000022610	RRM_3	PF08777.11	1e-27	1	1
ENSLBEP00000022610	La	PF05383.17	4.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023791	-	1272	XM_020651496	ENSLBEP00000022610	395 (aa)	XP_020507152	UPI0009B42D6C

Gene Model

Click here to download ENSLBEG00000017345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017345	ssb	100	53.790	ENSG00000138385	SSB	98	61.017	Homo_sapiens
ENSLBEG00000017345	ssb	100	84.557	ENSAPOG00000003448	ssb	100	84.557	Acanthochromis_polyacanthus
ENSLBEG00000017345	ssb	100	52.983	ENSAMEG00000010507	SSB	98	52.771	Ailuropoda_melanoleuca
ENSLBEG00000017345	ssb	94	79.784	ENSACIG00000001738	ssb	96	79.784	Amphilophus_citrinellus
ENSLBEG00000017345	ssb	100	85.063	ENSAOCG00000020398	ssb	100	85.063	Amphiprion_ocellaris
ENSLBEG00000017345	ssb	100	85.063	ENSAPEG00000020395	ssb	100	85.063	Amphiprion_percula
ENSLBEG00000017345	ssb	100	88.221	ENSATEG00000016884	ssb	100	88.221	Anabas_testudineus
ENSLBEG00000017345	ssb	100	52.955	ENSAPLG00000006109	SSB	99	53.318	Anas_platyrhynchos
ENSLBEG00000017345	ssb	100	52.798	ENSACAG00000017008	SSB	99	53.771	Anolis_carolinensis
ENSLBEG00000017345	ssb	100	49.015	ENSANAG00000027195	-	98	47.901	Aotus_nancymaae
ENSLBEG00000017345	ssb	100	77.193	ENSACLG00000010798	ssb	100	77.193	Astatotilapia_calliptera
ENSLBEG00000017345	ssb	100	61.369	ENSAMXG00000012606	ssb	100	62.103	Astyanax_mexicanus
ENSLBEG00000017345	ssb	100	56.049	ENSBTAG00000008716	SSB	98	55.112	Bos_taurus
ENSLBEG00000017345	ssb	75	35.974	WBGene00016653	C44E4.4	76	37.624	Caenorhabditis_elegans
ENSLBEG00000017345	ssb	100	54.680	ENSCJAG00000045073	SSB	98	53.980	Callithrix_jacchus
ENSLBEG00000017345	ssb	100	54.545	ENSCAFG00000012418	SSB	98	53.598	Canis_familiaris
ENSLBEG00000017345	ssb	100	54.545	ENSCAFG00020002900	SSB	98	53.598	Canis_lupus_dingo
ENSLBEG00000017345	ssb	100	55.665	ENSCHIG00000022624	-	98	54.726	Capra_hircus
ENSLBEG00000017345	ssb	100	52.228	ENSCHIG00000022196	-	98	51.621	Capra_hircus
ENSLBEG00000017345	ssb	99	55.062	ENSTSYG00000000097	SSB	98	54.115	Carlito_syrichta
ENSLBEG00000017345	ssb	100	54.926	ENSCPOG00000003338	SSB	98	53.980	Cavia_porcellus
ENSLBEG00000017345	ssb	100	54.433	ENSCCAG00000035147	SSB	98	53.731	Cebus_capucinus
ENSLBEG00000017345	ssb	72	50.172	ENSCATG00000036701	SSB	83	49.485	Cercocebus_atys
ENSLBEG00000017345	ssb	99	40.898	ENSCATG00000042909	-	98	40.547	Cercocebus_atys
ENSLBEG00000017345	ssb	100	55.419	ENSCLAG00000015617	-	98	54.975	Chinchilla_lanigera
ENSLBEG00000017345	ssb	100	54.433	ENSCSAG00000015200	SSB	88	53.941	Chlorocebus_sabaeus
ENSLBEG00000017345	ssb	99	49.500	ENSCSAG00000018390	-	99	48.990	Chlorocebus_sabaeus
ENSLBEG00000017345	ssb	100	55.419	ENSCHOG00000007763	SSB	98	54.478	Choloepus_hoffmanni
ENSLBEG00000017345	ssb	100	59.268	ENSCPBG00000006519	SSB	99	58.780	Chrysemys_picta_bellii
ENSLBEG00000017345	ssb	100	54.433	ENSCANG00000027695	SSB	98	53.731	Colobus_angolensis_palliatus
ENSLBEG00000017345	ssb	100	47.654	ENSCANG00000033240	-	98	47.382	Colobus_angolensis_palliatus
ENSLBEG00000017345	ssb	93	43.750	ENSCANG00000028838	-	88	43.351	Colobus_angolensis_palliatus
ENSLBEG00000017345	ssb	100	50.369	ENSCGRG00001024831	Ssb	98	50.372	Cricetulus_griseus_chok1gshd
ENSLBEG00000017345	ssb	100	50.369	ENSCGRG00000005387	Ssb	98	50.372	Cricetulus_griseus_crigri
ENSLBEG00000017345	ssb	100	83.459	ENSCSEG00000011599	ssb	100	83.459	Cynoglossus_semilaevis
ENSLBEG00000017345	ssb	100	80.000	ENSCVAG00000021558	ssb	100	83.500	Cyprinodon_variegatus
ENSLBEG00000017345	ssb	100	65.594	ENSDARG00000029252	ssb	100	64.356	Danio_rerio
ENSLBEG00000017345	ssb	100	55.172	ENSDNOG00000013450	SSB	98	54.229	Dasypus_novemcinctus
ENSLBEG00000017345	ssb	100	51.980	ENSDORG00000005543	Ssb	98	51.750	Dipodomys_ordii
ENSLBEG00000017345	ssb	86	35.311	FBgn0011638	La	78	36.728	Drosophila_melanogaster
ENSLBEG00000017345	ssb	51	60.396	ENSETEG00000004614	-	52	60.396	Echinops_telfairi
ENSLBEG00000017345	ssb	99	44.304	ENSEBUG00000001237	ssb	97	43.797	Eptatretus_burgeri
ENSLBEG00000017345	ssb	100	55.172	ENSEASG00005022835	SSB	98	54.229	Equus_asinus_asinus
ENSLBEG00000017345	ssb	100	55.172	ENSECAG00000018495	SSB	98	54.229	Equus_caballus
ENSLBEG00000017345	ssb	77	47.403	ENSEEUG00000008077	SSB	77	47.039	Erinaceus_europaeus
ENSLBEG00000017345	ssb	100	69.727	ENSELUG00000020929	ssb	100	69.727	Esox_lucius
ENSLBEG00000017345	ssb	100	55.283	ENSFCAG00000011601	SSB	98	54.342	Felis_catus
ENSLBEG00000017345	ssb	99	57.002	ENSFALG00000000930	SSB	99	56.265	Ficedula_albicollis
ENSLBEG00000017345	ssb	100	55.172	ENSFDAG00000000598	SSB	98	54.229	Fukomys_damarensis
ENSLBEG00000017345	ssb	75	77.888	ENSFHEG00000003268	ssb	94	77.524	Fundulus_heteroclitus
ENSLBEG00000017345	ssb	99	73.500	ENSGMOG00000002664	ssb	100	73.500	Gadus_morhua
ENSLBEG00000017345	ssb	99	56.127	ENSGALG00000009677	SSB	99	54.902	Gallus_gallus
ENSLBEG00000017345	ssb	100	81.638	ENSGAFG00000002749	ssb	100	82.382	Gambusia_affinis
ENSLBEG00000017345	ssb	100	82.921	ENSGACG00000005107	ssb	100	82.921	Gasterosteus_aculeatus
ENSLBEG00000017345	ssb	100	58.780	ENSGAGG00000007807	SSB	99	58.293	Gopherus_agassizii
ENSLBEG00000017345	ssb	53	50.226	ENSGGOG00000023471	-	89	49.321	Gorilla_gorilla
ENSLBEG00000017345	ssb	100	46.305	ENSGGOG00000024891	-	99	47.291	Gorilla_gorilla
ENSLBEG00000017345	ssb	100	77.193	ENSHBUG00000006584	ssb	100	77.193	Haplochromis_burtoni
ENSLBEG00000017345	ssb	100	54.612	ENSHGLG00000017580	-	98	54.054	Heterocephalus_glaber_female
ENSLBEG00000017345	ssb	99	51.244	ENSHGLG00000004478	-	98	50.620	Heterocephalus_glaber_female
ENSLBEG00000017345	ssb	100	51.378	ENSHGLG00000005832	-	98	50.380	Heterocephalus_glaber_female
ENSLBEG00000017345	ssb	100	54.612	ENSHGLG00100003084	-	98	54.054	Heterocephalus_glaber_male
ENSLBEG00000017345	ssb	100	50.124	ENSHGLG00100008767	-	98	49.123	Heterocephalus_glaber_male
ENSLBEG00000017345	ssb	99	76.456	ENSHCOG00000019011	ssb	99	76.709	Hippocampus_comes
ENSLBEG00000017345	ssb	100	65.122	ENSIPUG00000003681	SSB	100	63.659	Ictalurus_punctatus
ENSLBEG00000017345	ssb	100	54.926	ENSSTOG00000008416	SSB	98	53.980	Ictidomys_tridecemlineatus
ENSLBEG00000017345	ssb	100	50.120	ENSJJAG00000023158	-	99	50.120	Jaculus_jaculus
ENSLBEG00000017345	ssb	89	44.789	ENSJJAG00000016250	-	94	43.944	Jaculus_jaculus
ENSLBEG00000017345	ssb	100	83.166	ENSKMAG00000017317	ssb	100	83.166	Kryptolebias_marmoratus
ENSLBEG00000017345	ssb	100	53.790	ENSLACG00000014056	SSB	99	53.790	Latimeria_chalumnae
ENSLBEG00000017345	ssb	99	64.764	ENSLOCG00000007933	ssb	99	64.764	Lepisosteus_oculatus
ENSLBEG00000017345	ssb	75	42.373	ENSLAFG00000026721	-	97	42.373	Loxodonta_africana
ENSLBEG00000017345	ssb	100	49.136	ENSLAFG00000028909	-	99	47.901	Loxodonta_africana
ENSLBEG00000017345	ssb	100	52.494	ENSLAFG00000000867	-	99	52.732	Loxodonta_africana
ENSLBEG00000017345	ssb	100	54.433	ENSMFAG00000039066	SSB	98	53.731	Macaca_fascicularis
ENSLBEG00000017345	ssb	90	48.199	ENSMFAG00000041478	-	90	50.154	Macaca_fascicularis
ENSLBEG00000017345	ssb	100	46.914	ENSMMUG00000011724	-	96	46.384	Macaca_mulatta
ENSLBEG00000017345	ssb	99	40.648	ENSMMUG00000039889	-	98	40.299	Macaca_mulatta
ENSLBEG00000017345	ssb	100	54.433	ENSMMUG00000023051	SSB	98	53.731	Macaca_mulatta
ENSLBEG00000017345	ssb	90	48.199	ENSMNEG00000034698	-	90	50.154	Macaca_nemestrina
ENSLBEG00000017345	ssb	100	46.341	ENSMNEG00000028321	SSB	82	64.865	Macaca_nemestrina
ENSLBEG00000017345	ssb	100	39.506	ENSMLEG00000042644	-	98	38.653	Mandrillus_leucophaeus
ENSLBEG00000017345	ssb	100	54.433	ENSMLEG00000035717	SSB	98	53.731	Mandrillus_leucophaeus
ENSLBEG00000017345	ssb	100	84.925	ENSMAMG00000004800	ssb	100	84.925	Mastacembelus_armatus
ENSLBEG00000017345	ssb	100	77.193	ENSMZEG00005005749	ssb	100	77.193	Maylandia_zebra
ENSLBEG00000017345	ssb	99	55.637	ENSMGAG00000010328	SSB	100	61.836	Meleagris_gallopavo
ENSLBEG00000017345	ssb	100	55.172	ENSMICG00000028252	-	98	54.229	Microcebus_murinus
ENSLBEG00000017345	ssb	98	50.639	ENSMICG00000033304	-	91	52.055	Microcebus_murinus
ENSLBEG00000017345	ssb	94	54.188	ENSMODG00000008227	-	99	53.659	Monodelphis_domestica
ENSLBEG00000017345	ssb	94	47.721	ENSMODG00000019271	-	99	46.173	Monodelphis_domestica
ENSLBEG00000017345	ssb	91	50.777	ENSMODG00000007027	-	99	43.596	Monodelphis_domestica
ENSLBEG00000017345	ssb	92	79.292	ENSMALG00000008045	ssb	89	82.480	Monopterus_albus
ENSLBEG00000017345	ssb	100	51.325	MGP_CAROLIEiJ_G0023629	-	96	61.438	Mus_caroli
ENSLBEG00000017345	ssb	100	51.325	ENSMUSG00000068882	Ssb	96	61.438	Mus_musculus
ENSLBEG00000017345	ssb	100	51.084	MGP_PahariEiJ_G0025081	-	96	60.784	Mus_pahari
ENSLBEG00000017345	ssb	100	51.325	MGP_SPRETEiJ_G0024551	Ssb	96	61.438	Mus_spretus
ENSLBEG00000017345	ssb	100	55.172	ENSMPUG00000000785	SSB	98	54.229	Mustela_putorius_furo
ENSLBEG00000017345	ssb	100	54.217	ENSMLUG00000016316	SSB	99	53.976	Myotis_lucifugus
ENSLBEG00000017345	ssb	100	76.000	ENSNBRG00000012661	ssb	100	76.000	Neolamprologus_brichardi
ENSLBEG00000017345	ssb	91	41.644	ENSNLEG00000028754	-	77	43.598	Nomascus_leucogenys
ENSLBEG00000017345	ssb	100	54.187	ENSNLEG00000004958	SSB	98	53.483	Nomascus_leucogenys
ENSLBEG00000017345	ssb	63	59.600	ENSMEUG00000001650	-	100	59.600	Notamacropus_eugenii
ENSLBEG00000017345	ssb	94	54.178	ENSODEG00000004202	-	99	53.908	Octodon_degus
ENSLBEG00000017345	ssb	100	78.000	ENSONIG00000008776	ssb	100	78.000	Oreochromis_niloticus
ENSLBEG00000017345	ssb	100	54.433	ENSOANG00000008543	SSB	99	53.941	Ornithorhynchus_anatinus
ENSLBEG00000017345	ssb	100	54.187	ENSOCUG00000010396	SSB	99	53.695	Oryctolagus_cuniculus
ENSLBEG00000017345	ssb	100	79.750	ENSORLG00000017208	ssb	100	79.750	Oryzias_latipes
ENSLBEG00000017345	ssb	100	79.800	ENSORLG00020022574	ssb	100	79.800	Oryzias_latipes_hni
ENSLBEG00000017345	ssb	100	80.250	ENSORLG00015016592	ssb	100	80.250	Oryzias_latipes_hsok
ENSLBEG00000017345	ssb	100	82.500	ENSOMEG00000003193	ssb	100	83.000	Oryzias_melastigma
ENSLBEG00000017345	ssb	100	51.306	ENSOGAG00000029768	SSB	98	50.839	Otolemur_garnettii
ENSLBEG00000017345	ssb	100	55.665	ENSOARG00000002906	SSB	98	54.726	Ovis_aries
ENSLBEG00000017345	ssb	100	46.552	ENSPPAG00000032427	-	100	59.690	Pan_paniscus
ENSLBEG00000017345	ssb	92	44.236	ENSPPAG00000006189	-	91	43.646	Pan_paniscus
ENSLBEG00000017345	ssb	100	53.790	ENSPPAG00000042673	SSB	98	53.086	Pan_paniscus
ENSLBEG00000017345	ssb	100	55.283	ENSPPRG00000006599	SSB	98	54.342	Panthera_pardus
ENSLBEG00000017345	ssb	100	55.283	ENSPTIG00000011021	SSB	96	54.342	Panthera_tigris_altaica
ENSLBEG00000017345	ssb	100	44.828	ENSPTRG00000042880	-	99	44.828	Pan_troglodytes
ENSLBEG00000017345	ssb	100	53.790	ENSPTRG00000012620	SSB	98	53.086	Pan_troglodytes
ENSLBEG00000017345	ssb	94	38.889	ENSPANG00000031877	-	74	40.506	Papio_anubis
ENSLBEG00000017345	ssb	99	40.150	ENSPANG00000034126	-	98	40.000	Papio_anubis
ENSLBEG00000017345	ssb	100	54.433	ENSPANG00000007440	SSB	98	53.731	Papio_anubis
ENSLBEG00000017345	ssb	100	69.576	ENSPKIG00000019325	ssb	99	69.576	Paramormyrops_kingsleyae
ENSLBEG00000017345	ssb	100	58.780	ENSPSIG00000002265	SSB	93	58.537	Pelodiscus_sinensis
ENSLBEG00000017345	ssb	81	78.683	ENSPMGG00000020075	ssb	86	77.538	Periophthalmus_magnuspinnatus
ENSLBEG00000017345	ssb	81	46.130	ENSPMAG00000002982	ssb	88	45.526	Petromyzon_marinus
ENSLBEG00000017345	ssb	99	55.556	ENSPCIG00000028591	-	99	55.172	Phascolarctos_cinereus
ENSLBEG00000017345	ssb	100	84.000	ENSPFOG00000009650	ssb	100	84.000	Poecilia_formosa
ENSLBEG00000017345	ssb	100	82.750	ENSPLAG00000020498	ssb	100	83.750	Poecilia_latipinna
ENSLBEG00000017345	ssb	100	83.750	ENSPMEG00000001051	ssb	100	83.750	Poecilia_mexicana
ENSLBEG00000017345	ssb	94	83.019	ENSPREG00000003708	ssb	97	83.019	Poecilia_reticulata
ENSLBEG00000017345	ssb	100	54.187	ENSPPYG00000012919	SSB	98	53.483	Pongo_abelii
ENSLBEG00000017345	ssb	95	53.906	ENSPCAG00000010276	SSB	99	53.385	Procavia_capensis
ENSLBEG00000017345	ssb	100	49.261	ENSPCOG00000023189	-	98	48.259	Propithecus_coquereli
ENSLBEG00000017345	ssb	100	53.202	ENSPCOG00000015741	-	89	62.500	Propithecus_coquereli
ENSLBEG00000017345	ssb	89	56.695	ENSPVAG00000006615	SSB	98	56.410	Pteropus_vampyrus
ENSLBEG00000017345	ssb	100	77.444	ENSPNYG00000006444	ssb	100	77.444	Pundamilia_nyererei
ENSLBEG00000017345	ssb	100	63.081	ENSPNAG00000011708	ssb	100	63.325	Pygocentrus_nattereri
ENSLBEG00000017345	ssb	100	50.746	ENSRNOG00000011606	AABR07061825.1	98	50.503	Rattus_norvegicus
ENSLBEG00000017345	ssb	100	50.120	ENSRNOG00000007998	Ssb	98	48.418	Rattus_norvegicus
ENSLBEG00000017345	ssb	94	46.438	ENSRBIG00000041232	-	98	46.174	Rhinopithecus_bieti
ENSLBEG00000017345	ssb	100	47.805	ENSRBIG00000041972	SSB	85	64.865	Rhinopithecus_bieti
ENSLBEG00000017345	ssb	87	49.714	ENSRBIG00000041608	-	94	47.714	Rhinopithecus_bieti
ENSLBEG00000017345	ssb	99	39.801	ENSRBIG00000029918	-	98	39.206	Rhinopithecus_bieti
ENSLBEG00000017345	ssb	99	44.776	ENSRROG00000007149	-	98	44.169	Rhinopithecus_roxellana
ENSLBEG00000017345	ssb	100	54.433	ENSRROG00000040346	SSB	98	53.731	Rhinopithecus_roxellana
ENSLBEG00000017345	ssb	98	46.970	ENSRROG00000031684	-	99	46.717	Rhinopithecus_roxellana
ENSLBEG00000017345	ssb	87	52.000	ENSRROG00000034102	-	85	51.429	Rhinopithecus_roxellana
ENSLBEG00000017345	ssb	100	54.433	ENSSBOG00000027204	SSB	98	53.731	Saimiri_boliviensis_boliviensis
ENSLBEG00000017345	ssb	100	55.172	ENSSHAG00000018062	SSB	99	54.680	Sarcophilus_harrisii
ENSLBEG00000017345	ssb	100	69.877	ENSSFOG00015000550	ssb	99	69.877	Scleropages_formosus
ENSLBEG00000017345	ssb	100	82.323	ENSSMAG00000013885	ssb	99	85.445	Scophthalmus_maximus
ENSLBEG00000017345	ssb	100	88.191	ENSSDUG00000020117	ssb	100	88.191	Seriola_dumerili
ENSLBEG00000017345	ssb	100	84.422	ENSSLDG00000002525	ssb	100	84.673	Seriola_lalandi_dorsalis
ENSLBEG00000017345	ssb	95	50.260	ENSSARG00000007747	SSB	99	50.000	Sorex_araneus
ENSLBEG00000017345	ssb	100	58.088	ENSSPUG00000012112	SSB	99	58.088	Sphenodon_punctatus
ENSLBEG00000017345	ssb	100	85.063	ENSSPAG00000005696	ssb	100	85.063	Stegastes_partitus
ENSLBEG00000017345	ssb	94	53.723	ENSSSCG00000015938	SSB	92	52.419	Sus_scrofa
ENSLBEG00000017345	ssb	95	56.443	ENSTGUG00000007942	SSB	99	55.257	Taeniopygia_guttata
ENSLBEG00000017345	ssb	100	80.905	ENSTRUG00000017839	ssb	100	80.905	Takifugu_rubripes
ENSLBEG00000017345	ssb	93	78.591	ENSTNIG00000000915	ssb	100	76.839	Tetraodon_nigroviridis
ENSLBEG00000017345	ssb	82	65.217	ENSTBEG00000009056	SSB	81	65.217	Tupaia_belangeri
ENSLBEG00000017345	ssb	100	55.528	ENSTTRG00000002152	SSB	98	54.591	Tursiops_truncatus
ENSLBEG00000017345	ssb	93	56.568	ENSUAMG00000027833	SSB	96	55.556	Ursus_americanus
ENSLBEG00000017345	ssb	100	55.037	ENSUMAG00000013907	SSB	98	54.094	Ursus_maritimus
ENSLBEG00000017345	ssb	100	54.902	ENSVPAG00000007183	SSB	98	53.960	Vicugna_pacos
ENSLBEG00000017345	ssb	100	54.545	ENSVVUG00000016573	SSB	76	53.598	Vulpes_vulpes
ENSLBEG00000017345	ssb	99	51.168	ENSXETG00000025402	ssb	99	50.935	Xenopus_tropicalis
ENSLBEG00000017345	ssb	94	78.437	ENSXCOG00000019109	ssb	97	78.437	Xiphophorus_couchianus
ENSLBEG00000017345	ssb	100	80.397	ENSXMAG00000004888	ssb	100	80.397	Xiphophorus_maculatus