EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017424 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2142 bases
Position: chrFKLU01000005.1:2998827-3000968
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022711	zf-C2H2	PF00096.26	1.1e-36	1	6
ENSLBEP00000022711	zf-C2H2	PF00096.26	1.1e-36	2	6
ENSLBEP00000022711	zf-C2H2	PF00096.26	1.1e-36	3	6
ENSLBEP00000022711	zf-C2H2	PF00096.26	1.1e-36	4	6
ENSLBEP00000022711	zf-C2H2	PF00096.26	1.1e-36	5	6
ENSLBEP00000022711	zf-C2H2	PF00096.26	1.1e-36	6	6
ENSLBEP00000022711	zf-met	PF12874.7	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023897	-	624	-	ENSLBEP00000022711	207 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000017424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017424	-	96	46.512	ENSLBEG00000020128	-	99	42.105
ENSLBEG00000017424	-	95	34.500	ENSLBEG00000011250	-	55	37.500
ENSLBEG00000017424	-	97	39.394	ENSLBEG00000000373	-	71	39.394
ENSLBEG00000017424	-	97	40.244	ENSLBEG00000010165	-	92	40.244
ENSLBEG00000017424	-	90	34.234	ENSLBEG00000022059	-	82	34.234
ENSLBEG00000017424	-	95	38.889	ENSLBEG00000015694	-	76	38.889
ENSLBEG00000017424	-	98	34.731	ENSLBEG00000022736	prdm5	74	34.928
ENSLBEG00000017424	-	95	37.037	ENSLBEG00000011289	-	58	37.037
ENSLBEG00000017424	-	97	33.775	ENSLBEG00000013197	PRDM15	51	32.258
ENSLBEG00000017424	-	95	30.542	ENSLBEG00000014676	-	55	30.542
ENSLBEG00000017424	-	97	41.270	ENSLBEG00000018970	-	85	37.566
ENSLBEG00000017424	-	95	50.000	ENSLBEG00000026457	-	95	42.188
ENSLBEG00000017424	-	98	38.542	ENSLBEG00000008689	-	87	39.773
ENSLBEG00000017424	-	97	39.130	ENSLBEG00000001756	-	85	39.130
ENSLBEG00000017424	-	95	38.191	ENSLBEG00000028243	-	81	38.191
ENSLBEG00000017424	-	95	39.037	ENSLBEG00000008606	-	99	37.143
ENSLBEG00000017424	-	97	44.444	ENSLBEG00000011313	-	72	44.444
ENSLBEG00000017424	-	97	36.667	ENSLBEG00000008320	-	64	33.684
ENSLBEG00000017424	-	95	38.693	ENSLBEG00000028628	znf1174	50	38.693
ENSLBEG00000017424	-	93	38.158	ENSLBEG00000006963	-	56	38.158
ENSLBEG00000017424	-	95	39.037	ENSLBEG00000008115	-	89	39.370
ENSLBEG00000017424	-	100	45.312	ENSLBEG00000013570	-	99	40.887
ENSLBEG00000017424	-	93	39.474	ENSLBEG00000000972	snai2	57	39.474
ENSLBEG00000017424	-	97	35.200	ENSLBEG00000001132	-	79	35.200
ENSLBEG00000017424	-	91	39.362	ENSLBEG00000015264	-	79	39.362
ENSLBEG00000017424	-	95	36.216	ENSLBEG00000011028	-	74	36.216
ENSLBEG00000017424	-	91	34.615	ENSLBEG00000026573	-	55	34.615
ENSLBEG00000017424	-	96	45.122	ENSLBEG00000001920	-	92	40.000
ENSLBEG00000017424	-	98	42.246	ENSLBEG00000014211	-	83	42.246
ENSLBEG00000017424	-	97	38.071	ENSLBEG00000011986	-	89	38.071
ENSLBEG00000017424	-	98	39.752	ENSLBEG00000009580	-	82	39.752
ENSLBEG00000017424	-	95	38.119	ENSLBEG00000013235	-	79	38.119
ENSLBEG00000017424	-	96	36.585	ENSLBEG00000005715	-	78	36.585
ENSLBEG00000017424	-	94	40.000	ENSLBEG00000026552	-	55	40.000
ENSLBEG00000017424	-	92	43.590	ENSLBEG00000017726	-	74	41.026
ENSLBEG00000017424	-	97	42.373	ENSLBEG00000005729	znf652	84	33.161
ENSLBEG00000017424	-	99	39.196	ENSLBEG00000025689	-	67	39.196
ENSLBEG00000017424	-	95	39.572	ENSLBEG00000000393	-	77	39.572
ENSLBEG00000017424	-	89	37.963	ENSLBEG00000007937	-	56	37.963
ENSLBEG00000017424	-	91	40.476	ENSLBEG00000014282	-	70	40.476
ENSLBEG00000017424	-	98	36.150	ENSLBEG00000019067	zbtb47b	56	36.979
ENSLBEG00000017424	-	92	38.172	ENSLBEG00000014263	-	51	38.172
ENSLBEG00000017424	-	95	40.994	ENSLBEG00000008850	-	51	40.994
ENSLBEG00000017424	-	90	47.170	ENSLBEG00000002594	-	60	43.662
ENSLBEG00000017424	-	95	40.909	ENSLBEG00000021260	-	81	40.909
ENSLBEG00000017424	-	97	33.803	ENSLBEG00000024536	-	75	33.803
ENSLBEG00000017424	-	95	36.181	ENSLBEG00000004833	-	66	36.181
ENSLBEG00000017424	-	96	31.737	ENSLBEG00000011210	-	52	31.737
ENSLBEG00000017424	-	95	37.634	ENSLBEG00000000369	-	83	37.634
ENSLBEG00000017424	-	96	49.091	ENSLBEG00000012947	-	84	49.091
ENSLBEG00000017424	-	95	39.241	ENSLBEG00000024737	-	91	45.098
ENSLBEG00000017424	-	98	35.897	ENSLBEG00000012438	ZNF319	91	35.897
ENSLBEG00000017424	-	95	37.500	ENSLBEG00000006161	-	78	35.714
ENSLBEG00000017424	-	98	34.054	ENSLBEG00000027993	-	74	34.054
ENSLBEG00000017424	-	98	38.235	ENSLBEG00000018509	-	91	38.235
ENSLBEG00000017424	-	98	40.314	ENSLBEG00000024509	-	100	40.314
ENSLBEG00000017424	-	77	44.872	ENSLBEG00000011588	-	53	44.872
ENSLBEG00000017424	-	96	36.413	ENSLBEG00000024454	-	51	36.413
ENSLBEG00000017424	-	94	40.171	ENSLBEG00000004867	-	68	39.683
ENSLBEG00000017424	-	95	38.095	ENSLBEG00000011349	-	67	38.095
ENSLBEG00000017424	-	97	41.053	ENSLBEG00000009567	-	67	41.667
ENSLBEG00000017424	-	95	33.721	ENSLBEG00000020291	si:dkey-89b17.4	52	33.721
ENSLBEG00000017424	-	98	40.625	ENSLBEG00000016562	znf646	71	34.746
ENSLBEG00000017424	-	94	35.897	ENSLBEG00000010132	-	58	36.111
ENSLBEG00000017424	-	97	36.548	ENSLBEG00000028271	-	78	36.548
ENSLBEG00000017424	-	89	37.879	ENSLBEG00000012201	-	56	37.879
ENSLBEG00000017424	-	89	38.378	ENSLBEG00000007106	-	72	38.378
ENSLBEG00000017424	-	92	44.000	ENSLBEG00000001715	-	77	44.000
ENSLBEG00000017424	-	97	42.105	ENSLBEG00000002357	-	89	38.596
ENSLBEG00000017424	-	98	36.585	ENSLBEG00000020747	-	87	36.585
ENSLBEG00000017424	-	95	36.979	ENSLBEG00000004892	-	80	36.979
ENSLBEG00000017424	-	97	40.816	ENSLBEG00000005307	znf236	60	36.283
ENSLBEG00000017424	-	89	38.318	ENSLBEG00000022939	-	56	38.318
ENSLBEG00000017424	-	95	42.767	ENSLBEG00000017450	-	82	42.767
ENSLBEG00000017424	-	95	39.196	ENSLBEG00000000343	-	68	39.196
ENSLBEG00000017424	-	97	38.191	ENSLBEG00000011145	si:cabz01071911.3	76	38.650
ENSLBEG00000017424	-	91	44.086	ENSLBEG00000002278	-	66	41.111
ENSLBEG00000017424	-	95	35.514	ENSLBEG00000024458	-	69	35.514
ENSLBEG00000017424	-	95	41.916	ENSLBEG00000010278	-	94	39.024
ENSLBEG00000017424	-	95	37.879	ENSLBEG00000011465	-	85	37.989
ENSLBEG00000017424	-	95	39.227	ENSLBEG00000000435	-	75	39.227
ENSLBEG00000017424	-	95	40.860	ENSLBEG00000007837	-	80	40.860
ENSLBEG00000017424	-	97	38.624	ENSLBEG00000007251	-	73	38.624
ENSLBEG00000017424	-	97	34.826	ENSLBEG00000008439	znf319b	79	36.090
ENSLBEG00000017424	-	98	36.449	ENSLBEG00000025305	-	82	36.449
ENSLBEG00000017424	-	96	39.000	ENSLBEG00000011091	si:cabz01071911.3	95	39.000
ENSLBEG00000017424	-	95	38.095	ENSLBEG00000004805	-	79	38.095
ENSLBEG00000017424	-	92	37.410	ENSLBEG00000020297	gfi1b	54	37.410
ENSLBEG00000017424	-	77	48.000	ENSLBEG00000025139	-	62	48.000
ENSLBEG00000017424	-	90	46.154	ENSLBEG00000006924	-	99	46.154
ENSLBEG00000017424	-	97	39.423	ENSLBEG00000025696	-	61	39.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017424	-	90	31.579	ENSAPOG00000012437	-	81	31.579	Acanthochromis_polyacanthus
ENSLBEG00000017424	-	91	43.210	ENSAPOG00000019138	-	55	43.210	Acanthochromis_polyacanthus
ENSLBEG00000017424	-	96	35.965	ENSAPOG00000008319	-	58	35.965	Acanthochromis_polyacanthus
ENSLBEG00000017424	-	90	37.692	ENSACIG00000004641	-	57	37.692	Amphilophus_citrinellus
ENSLBEG00000017424	-	97	39.496	ENSACIG00000017892	-	75	39.496	Amphilophus_citrinellus
ENSLBEG00000017424	-	97	35.593	ENSAOCG00000015944	-	73	35.593	Amphiprion_ocellaris
ENSLBEG00000017424	-	95	33.582	ENSAOCG00000016897	-	63	33.582	Amphiprion_ocellaris
ENSLBEG00000017424	-	90	31.429	ENSAOCG00000006744	-	74	31.429	Amphiprion_ocellaris
ENSLBEG00000017424	-	97	35.652	ENSAOCG00000014769	-	81	35.652	Amphiprion_ocellaris
ENSLBEG00000017424	-	95	44.898	ENSAOCG00000001325	-	63	44.898	Amphiprion_ocellaris
ENSLBEG00000017424	-	98	43.860	ENSAPEG00000010013	-	57	38.222	Amphiprion_percula
ENSLBEG00000017424	-	90	31.169	ENSAPEG00000015714	-	68	31.169	Amphiprion_percula
ENSLBEG00000017424	-	91	33.582	ENSAPEG00000001556	-	63	33.582	Amphiprion_percula
ENSLBEG00000017424	-	97	39.655	ENSATEG00000018931	-	94	39.655	Anabas_testudineus
ENSLBEG00000017424	-	97	36.090	ENSACLG00000005694	-	50	34.978	Astatotilapia_calliptera
ENSLBEG00000017424	-	90	43.421	ENSACLG00000011658	-	75	43.421	Astatotilapia_calliptera
ENSLBEG00000017424	-	97	30.189	ENSAMXG00000029518	-	56	30.189	Astyanax_mexicanus
ENSLBEG00000017424	-	97	36.145	ENSCING00000002128	zf(c2h2)-35	64	40.741	Ciona_intestinalis
ENSLBEG00000017424	-	97	43.750	ENSCSEG00000010264	-	92	37.226	Cynoglossus_semilaevis
ENSLBEG00000017424	-	88	50.000	ENSCSEG00000015593	-	74	50.000	Cynoglossus_semilaevis
ENSLBEG00000017424	-	95	41.379	ENSCSEG00000010453	-	61	41.379	Cynoglossus_semilaevis
ENSLBEG00000017424	-	71	36.667	ENSCVAG00000006653	-	58	41.121	Cyprinodon_variegatus
ENSLBEG00000017424	-	91	41.026	ENSCVAG00000012682	-	58	41.026	Cyprinodon_variegatus
ENSLBEG00000017424	-	94	40.000	ENSCVAG00000020141	-	70	40.000	Cyprinodon_variegatus
ENSLBEG00000017424	-	97	38.323	ENSCVAG00000015616	-	77	37.725	Cyprinodon_variegatus
ENSLBEG00000017424	-	97	42.000	ENSCVAG00000003250	-	68	42.000	Cyprinodon_variegatus
ENSLBEG00000017424	-	91	39.623	ENSEBUG00000007931	-	64	39.623	Eptatretus_burgeri
ENSLBEG00000017424	-	95	38.365	ENSEBUG00000002290	-	56	38.365	Eptatretus_burgeri
ENSLBEG00000017424	-	92	44.737	ENSELUG00000024007	-	59	39.604	Esox_lucius
ENSLBEG00000017424	-	96	37.349	ENSELUG00000001909	-	78	30.939	Esox_lucius
ENSLBEG00000017424	-	97	38.835	ENSFHEG00000023184	-	54	38.835	Fundulus_heteroclitus
ENSLBEG00000017424	-	98	36.019	ENSGAFG00000008204	-	61	36.019	Gambusia_affinis
ENSLBEG00000017424	-	94	40.000	ENSGAFG00000001879	-	61	40.000	Gambusia_affinis
ENSLBEG00000017424	-	95	34.286	ENSGAFG00000007528	-	52	34.286	Gambusia_affinis
ENSLBEG00000017424	-	97	34.978	ENSHBUG00000006656	-	62	34.978	Haplochromis_burtoni
ENSLBEG00000017424	-	96	40.984	ENSHCOG00000008550	-	59	37.566	Hippocampus_comes
ENSLBEG00000017424	-	96	40.984	ENSHCOG00000001873	-	59	37.566	Hippocampus_comes
ENSLBEG00000017424	-	97	42.708	ENSHCOG00000015497	-	75	42.708	Hippocampus_comes
ENSLBEG00000017424	-	96	36.158	ENSHCOG00000013489	-	91	36.508	Hippocampus_comes
ENSLBEG00000017424	-	90	43.038	ENSHCOG00000020670	-	73	43.038	Hippocampus_comes
ENSLBEG00000017424	-	96	32.381	ENSKMAG00000014184	-	53	32.381	Kryptolebias_marmoratus
ENSLBEG00000017424	-	90	35.096	ENSKMAG00000007699	-	64	35.096	Kryptolebias_marmoratus
ENSLBEG00000017424	-	99	37.113	ENSLOCG00000004208	-	99	37.113	Lepisosteus_oculatus
ENSLBEG00000017424	-	97	38.760	ENSMAMG00000017939	-	92	38.760	Mastacembelus_armatus
ENSLBEG00000017424	-	95	39.157	ENSMZEG00005013907	-	79	39.157	Maylandia_zebra
ENSLBEG00000017424	-	92	42.857	ENSMMOG00000017592	-	57	43.373	Mola_mola
ENSLBEG00000017424	-	96	34.574	ENSMALG00000004279	-	73	34.574	Monopterus_albus
ENSLBEG00000017424	-	95	33.333	ENSONIG00000005050	-	85	33.333	Oreochromis_niloticus
ENSLBEG00000017424	-	96	36.842	ENSONIG00000007967	-	66	36.842	Oreochromis_niloticus
ENSLBEG00000017424	-	97	37.725	ENSORLG00000021885	-	63	37.255	Oryzias_latipes
ENSLBEG00000017424	-	99	37.234	ENSORLG00000002268	-	90	37.234	Oryzias_latipes
ENSLBEG00000017424	-	97	35.185	ENSORLG00020018921	-	74	34.536	Oryzias_latipes_hni
ENSLBEG00000017424	-	97	43.590	ENSORLG00020019227	-	50	43.590	Oryzias_latipes_hni
ENSLBEG00000017424	-	90	38.323	ENSORLG00015018099	-	62	44.898	Oryzias_latipes_hsok
ENSLBEG00000017424	-	97	38.636	ENSOMEG00000005578	-	64	38.636	Oryzias_melastigma
ENSLBEG00000017424	-	99	36.571	ENSPMGG00000007051	-	58	37.143	Periophthalmus_magnuspinnatus
ENSLBEG00000017424	-	91	37.895	ENSPMGG00000002455	-	88	36.788	Periophthalmus_magnuspinnatus
ENSLBEG00000017424	-	99	39.231	ENSPMGG00000009571	-	74	39.231	Periophthalmus_magnuspinnatus
ENSLBEG00000017424	-	96	36.239	ENSPMGG00000006928	-	56	36.239	Periophthalmus_magnuspinnatus
ENSLBEG00000017424	-	90	43.421	ENSPMGG00000002661	-	83	43.421	Periophthalmus_magnuspinnatus
ENSLBEG00000017424	-	89	39.806	ENSPMGG00000002659	-	62	39.806	Periophthalmus_magnuspinnatus
ENSLBEG00000017424	-	91	48.485	ENSPMAG00000000839	-	94	39.583	Petromyzon_marinus
ENSLBEG00000017424	-	97	36.548	ENSPMAG00000004189	-	97	36.548	Petromyzon_marinus
ENSLBEG00000017424	-	92	37.662	ENSPMAG00000002022	-	95	37.662	Petromyzon_marinus
ENSLBEG00000017424	-	97	38.793	ENSPFOG00000018860	-	99	38.793	Poecilia_formosa
ENSLBEG00000017424	-	95	38.542	ENSPFOG00000009491	-	52	38.542	Poecilia_formosa
ENSLBEG00000017424	-	96	35.537	ENSPLAG00000008941	-	78	35.537	Poecilia_latipinna
ENSLBEG00000017424	-	95	37.349	ENSPLAG00000010067	-	66	37.349	Poecilia_latipinna
ENSLBEG00000017424	-	96	35.537	ENSPLAG00000014832	-	74	35.537	Poecilia_latipinna
ENSLBEG00000017424	-	95	38.542	ENSPMEG00000024117	-	52	38.542	Poecilia_mexicana
ENSLBEG00000017424	-	96	35.537	ENSPMEG00000005210	-	74	35.537	Poecilia_mexicana
ENSLBEG00000017424	-	96	39.806	ENSPMEG00000002953	-	58	39.806	Poecilia_mexicana
ENSLBEG00000017424	-	96	39.560	ENSPREG00000002603	-	55	39.560	Poecilia_reticulata
ENSLBEG00000017424	-	86	41.304	ENSPREG00000009488	-	93	41.304	Poecilia_reticulata
ENSLBEG00000017424	-	97	39.048	ENSPNYG00000017888	-	54	39.048	Pundamilia_nyererei
ENSLBEG00000017424	-	95	38.776	ENSPNAG00000005946	-	87	38.776	Pygocentrus_nattereri
ENSLBEG00000017424	-	91	40.385	ENSSFOG00015011531	-	88	32.479	Scleropages_formosus
ENSLBEG00000017424	-	99	41.284	ENSSMAG00000013291	-	91	37.912	Scophthalmus_maximus
ENSLBEG00000017424	-	91	35.556	ENSSMAG00000008308	-	66	35.556	Scophthalmus_maximus
ENSLBEG00000017424	-	96	36.842	ENSSLDG00000011849	-	62	35.556	Seriola_lalandi_dorsalis
ENSLBEG00000017424	-	97	39.837	ENSSLDG00000014436	-	71	39.837	Seriola_lalandi_dorsalis
ENSLBEG00000017424	-	86	36.250	ENSSPAG00000011533	-	88	36.250	Stegastes_partitus
ENSLBEG00000017424	-	96	42.857	ENSSPAG00000011544	-	52	42.857	Stegastes_partitus
ENSLBEG00000017424	-	97	38.636	ENSXETG00000012506	znf91	99	41.026	Xenopus_tropicalis
ENSLBEG00000017424	-	95	37.113	ENSXCOG00000000254	-	71	37.113	Xiphophorus_couchianus
ENSLBEG00000017424	-	91	36.364	ENSXCOG00000020768	-	63	36.364	Xiphophorus_couchianus
ENSLBEG00000017424	-	95	37.870	ENSXCOG00000003441	-	58	37.870	Xiphophorus_couchianus
ENSLBEG00000017424	-	89	36.364	ENSXCOG00000014360	-	51	36.364	Xiphophorus_couchianus