EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017430 (Gene tree)
Gene ID: 109981162
Gene Symbol: srsf9
Alias: zgc:77449
Full Name: serine/arginine-rich splicing factor 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7218 bases
Position: chrFKLU01000029.1:36005-43222
Accession: 109981162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022735	RRM_1	PF00076.22	6e-30	1	2
ENSLBEP00000022735	RRM_1	PF00076.22	6e-30	2	2
ENSLBEP00000022744	RRM_1	PF00076.22	7.4e-30	1	2
ENSLBEP00000022744	RRM_1	PF00076.22	7.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023921	-	750	-	ENSLBEP00000022735	249 (aa)	-	-
ENSLBET00000023930	-	1230	XM_020629828	ENSLBEP00000022744	266 (aa)	XP_020485484	UPI0009B3AAF2

Gene Model

Click here to download ENSLBEG00000017430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017430	srsf9	74	65.152	ENSLBEG00000015294	-	78	61.340
ENSLBEG00000017430	srsf9	74	64.141	ENSLBEG00000020864	-	77	68.362
ENSLBEG00000017430	srsf9	71	42.632	ENSLBEG00000013647	srsf5b	61	39.785
ENSLBEG00000017430	srsf9	76	45.894	ENSLBEG00000017153	srsf5a	74	45.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017430	srsf9	90	65.778	ENSG00000111786	SRSF9	99	79.592	Homo_sapiens
ENSLBEG00000017430	srsf9	93	83.468	ENSAPOG00000013728	srsf9	100	87.045	Acanthochromis_polyacanthus
ENSLBEG00000017430	srsf9	85	69.340	ENSAMEG00000013294	SRSF9	93	65.517	Ailuropoda_melanoleuca
ENSLBEG00000017430	srsf9	89	86.222	ENSACIG00000015765	srsf9	97	86.885	Amphilophus_citrinellus
ENSLBEG00000017430	srsf9	100	83.835	ENSAOCG00000002992	srsf9	100	86.992	Amphiprion_ocellaris
ENSLBEG00000017430	srsf9	100	83.835	ENSAPEG00000011908	srsf9	100	86.992	Amphiprion_percula
ENSLBEG00000017430	srsf9	92	85.656	ENSATEG00000019984	srsf9	100	89.113	Anabas_testudineus
ENSLBEG00000017430	srsf9	84	67.453	ENSACAG00000002877	SRSF9	91	61.233	Anolis_carolinensis
ENSLBEG00000017430	srsf9	85	68.396	ENSANAG00000035910	SRSF9	91	66.010	Aotus_nancymaae
ENSLBEG00000017430	srsf9	92	82.759	ENSACLG00000015678	srsf9	99	82.470	Astatotilapia_calliptera
ENSLBEG00000017430	srsf9	96	79.675	ENSAMXG00000032281	srsf9	100	76.735	Astyanax_mexicanus
ENSLBEG00000017430	srsf9	90	65.333	ENSBTAG00000012792	SRSF9	95	63.721	Bos_taurus
ENSLBEG00000017430	srsf9	86	66.667	ENSBTAG00000005584	-	95	63.721	Bos_taurus
ENSLBEG00000017430	srsf9	90	65.778	ENSCJAG00000001187	SRSF9	97	64.957	Callithrix_jacchus
ENSLBEG00000017430	srsf9	90	67.111	ENSCAFG00000010314	SRSF9	95	63.721	Canis_familiaris
ENSLBEG00000017430	srsf9	90	67.111	ENSCAFG00020020612	SRSF9	95	63.721	Canis_lupus_dingo
ENSLBEG00000017430	srsf9	90	65.333	ENSCHIG00000025274	SRSF9	95	63.721	Capra_hircus
ENSLBEG00000017430	srsf9	90	53.778	ENSTSYG00000029305	-	98	49.554	Carlito_syrichta
ENSLBEG00000017430	srsf9	84	60.766	ENSTSYG00000034124	-	92	55.981	Carlito_syrichta
ENSLBEG00000017430	srsf9	90	67.411	ENSTSYG00000006848	-	95	63.721	Carlito_syrichta
ENSLBEG00000017430	srsf9	85	60.849	ENSTSYG00000036169	-	98	53.125	Carlito_syrichta
ENSLBEG00000017430	srsf9	90	65.778	ENSCPOG00000033486	SRSF9	95	64.186	Cavia_porcellus
ENSLBEG00000017430	srsf9	90	65.778	ENSCCAG00000036053	SRSF9	97	64.957	Cebus_capucinus
ENSLBEG00000017430	srsf9	69	60.694	ENSCATG00000000421	-	87	60.694	Cercocebus_atys
ENSLBEG00000017430	srsf9	90	65.778	ENSCATG00000021315	SRSF9	97	64.957	Cercocebus_atys
ENSLBEG00000017430	srsf9	90	65.778	ENSCLAG00000012289	SRSF9	95	64.186	Chinchilla_lanigera
ENSLBEG00000017430	srsf9	90	65.778	ENSCSAG00000002257	SRSF9	95	64.186	Chlorocebus_sabaeus
ENSLBEG00000017430	srsf9	61	69.079	ENSCHOG00000009241	SRSF9	94	61.842	Choloepus_hoffmanni
ENSLBEG00000017430	srsf9	84	69.014	ENSCPBG00000011340	SRSF9	99	61.017	Chrysemys_picta_bellii
ENSLBEG00000017430	srsf9	82	66.667	ENSCANG00000034161	SRSF9	86	64.615	Colobus_angolensis_palliatus
ENSLBEG00000017430	srsf9	90	67.111	ENSCGRG00001021965	Srsf9	95	63.721	Cricetulus_griseus_chok1gshd
ENSLBEG00000017430	srsf9	100	84.701	ENSCSEG00000015663	srsf9	97	87.727	Cynoglossus_semilaevis
ENSLBEG00000017430	srsf9	93	76.210	ENSCVAG00000021417	srsf9	100	80.081	Cyprinodon_variegatus
ENSLBEG00000017430	srsf9	100	80.524	ENSDARG00000008097	srsf9	100	75.304	Danio_rerio
ENSLBEG00000017430	srsf9	90	65.778	ENSDNOG00000012598	SRSF9	95	64.186	Dasypus_novemcinctus
ENSLBEG00000017430	srsf9	90	66.667	ENSDORG00000013162	Srsf9	99	62.946	Dipodomys_ordii
ENSLBEG00000017430	srsf9	85	54.717	ENSETEG00000002606	SRSF9	95	50.952	Echinops_telfairi
ENSLBEG00000017430	srsf9	90	65.778	ENSEASG00005004727	SRSF9	95	64.186	Equus_asinus_asinus
ENSLBEG00000017430	srsf9	90	65.778	ENSECAG00000009116	SRSF9	97	64.957	Equus_caballus
ENSLBEG00000017430	srsf9	59	80.000	ENSEEUG00000011655	SRSF9	70	80.000	Erinaceus_europaeus
ENSLBEG00000017430	srsf9	96	80.328	ENSELUG00000012644	SRSF9	100	69.672	Esox_lucius
ENSLBEG00000017430	srsf9	95	75.397	ENSELUG00000021669	srsf9	100	77.108	Esox_lucius
ENSLBEG00000017430	srsf9	90	67.111	ENSFCAG00000011011	SRSF9	95	63.721	Felis_catus
ENSLBEG00000017430	srsf9	99	81.423	ENSFHEG00000020851	srsf9	100	71.311	Fundulus_heteroclitus
ENSLBEG00000017430	srsf9	100	75.746	ENSGMOG00000007980	srsf9	100	80.709	Gadus_morhua
ENSLBEG00000017430	srsf9	85	84.018	ENSGAFG00000009123	srsf9	100	82.996	Gambusia_affinis
ENSLBEG00000017430	srsf9	92	86.066	ENSGACG00000016921	srsf9	100	88.390	Gasterosteus_aculeatus
ENSLBEG00000017430	srsf9	84	69.484	ENSGAGG00000016015	SRSF9	99	61.441	Gopherus_agassizii
ENSLBEG00000017430	srsf9	52	44.203	ENSGGOG00000022012	-	90	57.009	Gorilla_gorilla
ENSLBEG00000017430	srsf9	65	64.815	ENSGGOG00000027142	-	95	52.195	Gorilla_gorilla
ENSLBEG00000017430	srsf9	92	82.759	ENSHBUG00000019320	srsf9	100	84.774	Haplochromis_burtoni
ENSLBEG00000017430	srsf9	76	64.021	ENSHGLG00000003582	-	91	59.259	Heterocephalus_glaber_female
ENSLBEG00000017430	srsf9	90	65.778	ENSHGLG00000014372	SRSF9	95	64.186	Heterocephalus_glaber_female
ENSLBEG00000017430	srsf9	75	64.706	ENSHGLG00100015198	-	89	59.893	Heterocephalus_glaber_male
ENSLBEG00000017430	srsf9	90	65.778	ENSHGLG00100013695	SRSF9	95	64.186	Heterocephalus_glaber_male
ENSLBEG00000017430	srsf9	100	63.941	ENSHCOG00000017311	srsf9	100	62.454	Hippocampus_comes
ENSLBEG00000017430	srsf9	50	72.388	ENSHCOG00000018428	-	90	86.607	Hippocampus_comes
ENSLBEG00000017430	srsf9	96	83.058	ENSIPUG00000005511	srsf9	100	77.686	Ictalurus_punctatus
ENSLBEG00000017430	srsf9	90	65.778	ENSSTOG00000007344	SRSF9	97	64.957	Ictidomys_tridecemlineatus
ENSLBEG00000017430	srsf9	90	61.088	ENSJJAG00000013374	Srsf9	99	62.500	Jaculus_jaculus
ENSLBEG00000017430	srsf9	92	71.721	ENSKMAG00000007113	srsf9	100	74.089	Kryptolebias_marmoratus
ENSLBEG00000017430	srsf9	86	71.818	ENSLACG00000018228	SRSF9	96	68.636	Latimeria_chalumnae
ENSLBEG00000017430	srsf9	100	76.208	ENSLOCG00000004044	srsf9	98	78.543	Lepisosteus_oculatus
ENSLBEG00000017430	srsf9	76	55.941	ENSLAFG00000006381	SRSF9	97	61.714	Loxodonta_africana
ENSLBEG00000017430	srsf9	82	58.065	ENSMFAG00000039423	SRSF9	95	64.641	Macaca_fascicularis
ENSLBEG00000017430	srsf9	80	66.667	ENSMMUG00000016494	SRSF9	69	63.184	Macaca_mulatta
ENSLBEG00000017430	srsf9	69	61.850	ENSMMUG00000040941	-	85	61.850	Macaca_mulatta
ENSLBEG00000017430	srsf9	90	65.778	ENSMNEG00000044129	SRSF9	97	64.957	Macaca_nemestrina
ENSLBEG00000017430	srsf9	84	64.929	ENSMLEG00000041155	SRSF9	96	65.842	Mandrillus_leucophaeus
ENSLBEG00000017430	srsf9	92	84.016	ENSMAMG00000011581	srsf9	100	90.244	Mastacembelus_armatus
ENSLBEG00000017430	srsf9	92	82.759	ENSMZEG00005018422	srsf9	99	82.470	Maylandia_zebra
ENSLBEG00000017430	srsf9	90	66.667	ENSMAUG00000011403	Srsf9	95	61.860	Mesocricetus_auratus
ENSLBEG00000017430	srsf9	90	65.333	ENSMICG00000008674	SRSF9	97	64.957	Microcebus_murinus
ENSLBEG00000017430	srsf9	86	66.667	ENSMOCG00000021163	Srsf9	95	63.721	Microtus_ochrogaster
ENSLBEG00000017430	srsf9	92	86.885	ENSMMOG00000009349	srsf9	99	84.030	Mola_mola
ENSLBEG00000017430	srsf9	84	68.571	ENSMODG00000003146	SRSF9	93	65.025	Monodelphis_domestica
ENSLBEG00000017430	srsf9	92	87.705	ENSMALG00000011678	srsf9	100	92.887	Monopterus_albus
ENSLBEG00000017430	srsf9	90	67.556	MGP_CAROLIEiJ_G0027622	Srsf9	95	63.889	Mus_caroli
ENSLBEG00000017430	srsf9	90	67.556	ENSMUSG00000029538	Srsf9	95	63.889	Mus_musculus
ENSLBEG00000017430	srsf9	90	67.556	MGP_SPRETEiJ_G0028620	Srsf9	95	63.889	Mus_spretus
ENSLBEG00000017430	srsf9	90	66.520	ENSMPUG00000003193	SRSF9	95	62.212	Mustela_putorius_furo
ENSLBEG00000017430	srsf9	90	64.758	ENSMLUG00000010346	SRSF9	96	61.927	Myotis_lucifugus
ENSLBEG00000017430	srsf9	90	66.667	ENSNGAG00000012738	Srsf9	95	63.721	Nannospalax_galili
ENSLBEG00000017430	srsf9	88	85.268	ENSNBRG00000003888	srsf9	100	84.774	Neolamprologus_brichardi
ENSLBEG00000017430	srsf9	90	65.778	ENSNLEG00000015661	SRSF9	97	64.957	Nomascus_leucogenys
ENSLBEG00000017430	srsf9	81	61.881	ENSNLEG00000033316	-	94	58.621	Nomascus_leucogenys
ENSLBEG00000017430	srsf9	58	75.694	ENSMEUG00000004069	SRSF9	92	77.083	Notamacropus_eugenii
ENSLBEG00000017430	srsf9	90	65.778	ENSOPRG00000004234	SRSF9	99	62.054	Ochotona_princeps
ENSLBEG00000017430	srsf9	52	54.745	ENSODEG00000006061	SRSF9	98	64.167	Octodon_degus
ENSLBEG00000017430	srsf9	95	84.647	ENSONIG00000013974	srsf9	100	84.774	Oreochromis_niloticus
ENSLBEG00000017430	srsf9	90	64.889	ENSOCUG00000024603	SRSF9	99	62.500	Oryctolagus_cuniculus
ENSLBEG00000017430	srsf9	100	74.060	ENSORLG00000023709	srsf9	100	77.551	Oryzias_latipes
ENSLBEG00000017430	srsf9	100	74.060	ENSORLG00020017678	srsf9	100	77.551	Oryzias_latipes_hni
ENSLBEG00000017430	srsf9	100	74.060	ENSORLG00015004857	srsf9	100	77.551	Oryzias_latipes_hsok
ENSLBEG00000017430	srsf9	100	79.323	ENSOMEG00000002601	srsf9	100	78.367	Oryzias_melastigma
ENSLBEG00000017430	srsf9	90	66.222	ENSOGAG00000003852	SRSF9	95	64.186	Otolemur_garnettii
ENSLBEG00000017430	srsf9	86	66.204	ENSOARG00000012402	SRSF9	99	64.865	Ovis_aries
ENSLBEG00000017430	srsf9	78	67.857	ENSPPAG00000034420	SRSF9	82	64.796	Pan_paniscus
ENSLBEG00000017430	srsf9	52	48.921	ENSPPAG00000026547	-	91	61.682	Pan_paniscus
ENSLBEG00000017430	srsf9	90	67.111	ENSPPRG00000001309	SRSF9	95	63.721	Panthera_pardus
ENSLBEG00000017430	srsf9	61	67.105	ENSPTIG00000010327	SRSF9	67	61.184	Panthera_tigris_altaica
ENSLBEG00000017430	srsf9	90	65.778	ENSPTRG00000005535	SRSF9	97	64.957	Pan_troglodytes
ENSLBEG00000017430	srsf9	52	48.921	ENSPTRG00000052688	-	91	61.682	Pan_troglodytes
ENSLBEG00000017430	srsf9	90	65.778	ENSPANG00000016072	SRSF9	97	64.957	Papio_anubis
ENSLBEG00000017430	srsf9	85	79.263	ENSPKIG00000024851	SRSF9	100	75.486	Paramormyrops_kingsleyae
ENSLBEG00000017430	srsf9	96	76.327	ENSPKIG00000023787	srsf9	100	78.367	Paramormyrops_kingsleyae
ENSLBEG00000017430	srsf9	100	69.925	ENSPMGG00000016215	srsf9	100	65.476	Periophthalmus_magnuspinnatus
ENSLBEG00000017430	srsf9	86	68.056	ENSPEMG00000016311	Srsf9	95	63.721	Peromyscus_maniculatus_bairdii
ENSLBEG00000017430	srsf9	84	69.524	ENSPCIG00000025998	SRSF9	83	66.010	Phascolarctos_cinereus
ENSLBEG00000017430	srsf9	94	78.261	ENSPFOG00000019792	srsf9	100	76.984	Poecilia_formosa
ENSLBEG00000017430	srsf9	90	83.628	ENSPLAG00000022740	srsf9	100	78.838	Poecilia_latipinna
ENSLBEG00000017430	srsf9	94	77.866	ENSPMEG00000008809	srsf9	100	76.587	Poecilia_mexicana
ENSLBEG00000017430	srsf9	85	81.651	ENSPREG00000013165	srsf9	99	75.591	Poecilia_reticulata
ENSLBEG00000017430	srsf9	90	64.000	ENSPPYG00000029896	-	99	61.607	Pongo_abelii
ENSLBEG00000017430	srsf9	90	65.778	ENSPPYG00000005031	-	95	64.186	Pongo_abelii
ENSLBEG00000017430	srsf9	86	67.130	ENSPPYG00000019910	-	95	64.186	Pongo_abelii
ENSLBEG00000017430	srsf9	50	71.200	ENSPCAG00000013889	SRSF9	80	70.635	Procavia_capensis
ENSLBEG00000017430	srsf9	90	65.333	ENSPCOG00000015115	SRSF9	97	64.957	Propithecus_coquereli
ENSLBEG00000017430	srsf9	90	65.778	ENSPVAG00000002229	SRSF9	95	64.186	Pteropus_vampyrus
ENSLBEG00000017430	srsf9	88	85.268	ENSPNYG00000008644	srsf9	100	84.774	Pundamilia_nyererei
ENSLBEG00000017430	srsf9	96	84.836	ENSPNAG00000003588	srsf9	100	77.366	Pygocentrus_nattereri
ENSLBEG00000017430	srsf9	90	67.111	ENSRNOG00000001163	Srsf9	95	64.186	Rattus_norvegicus
ENSLBEG00000017430	srsf9	61	66.447	ENSRBIG00000042683	SRSF9	81	61.842	Rhinopithecus_bieti
ENSLBEG00000017430	srsf9	65	64.815	ENSRROG00000041980	SRSF9	96	57.065	Rhinopithecus_roxellana
ENSLBEG00000017430	srsf9	52	56.522	ENSSBOG00000017305	SRSF9	86	71.171	Saimiri_boliviensis_boliviensis
ENSLBEG00000017430	srsf9	64	60.248	ENSSHAG00000005685	SRSF9	94	62.338	Sarcophilus_harrisii
ENSLBEG00000017430	srsf9	99	74.902	ENSSFOG00015017303	srsf9	100	78.862	Scleropages_formosus
ENSLBEG00000017430	srsf9	96	85.772	ENSSFOG00015002476	SRSF9	100	76.423	Scleropages_formosus
ENSLBEG00000017430	srsf9	91	81.659	ENSSMAG00000002039	srsf9	89	84.018	Scophthalmus_maximus
ENSLBEG00000017430	srsf9	92	86.475	ENSSDUG00000018908	srsf9	100	89.600	Seriola_dumerili
ENSLBEG00000017430	srsf9	92	86.475	ENSSLDG00000012305	srsf9	100	89.600	Seriola_lalandi_dorsalis
ENSLBEG00000017430	srsf9	64	65.839	ENSSARG00000003434	SRSF9	99	60.248	Sorex_araneus
ENSLBEG00000017430	srsf9	84	66.509	ENSSPUG00000015680	SRSF9	93	62.332	Sphenodon_punctatus
ENSLBEG00000017430	srsf9	100	85.714	ENSSPAG00000006285	srsf9	100	86.747	Stegastes_partitus
ENSLBEG00000017430	srsf9	65	59.259	ENSSSCG00000038585	-	89	51.852	Sus_scrofa
ENSLBEG00000017430	srsf9	90	65.778	ENSSSCG00000009906	SRSF9	95	64.186	Sus_scrofa
ENSLBEG00000017430	srsf9	100	65.441	ENSTRUG00000012723	srsf9	100	67.279	Takifugu_rubripes
ENSLBEG00000017430	srsf9	91	85.281	ENSTNIG00000000697	srsf9	96	82.158	Tetraodon_nigroviridis
ENSLBEG00000017430	srsf9	80	66.169	ENSTBEG00000008499	SRSF9	99	63.184	Tupaia_belangeri
ENSLBEG00000017430	srsf9	80	67.000	ENSTTRG00000000145	SRSF9	95	64.921	Tursiops_truncatus
ENSLBEG00000017430	srsf9	90	65.778	ENSUAMG00000015527	SRSF9	97	64.957	Ursus_americanus
ENSLBEG00000017430	srsf9	65	61.404	ENSUMAG00000006151	SRSF9	81	54.301	Ursus_maritimus
ENSLBEG00000017430	srsf9	90	67.111	ENSVVUG00000021065	SRSF9	97	64.103	Vulpes_vulpes
ENSLBEG00000017430	srsf9	90	61.739	ENSXETG00000026940	srsf9	98	58.079	Xenopus_tropicalis
ENSLBEG00000017430	srsf9	83	85.047	ENSXMAG00000001438	srsf9	100	82.591	Xiphophorus_maculatus