EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017456 (Gene tree)
Gene ID: 109977330
Gene Symbol: -
Alias: -
Full Name: tRNA wybutosine-synthesizing protein 2 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 1497 bases
Position: chrFKLU01005201.1:13771-15267
Accession: 109977330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022766	MTS	PF05175.14	8e-06	1	1
ENSLBEP00000022766	Met_10	PF02475.16	5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000023952	-	741	XM_020627090	ENSLBEP00000022766	246 (aa)	XP_020482746	-

Gene Model

Click here to download ENSLBEG00000017456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017456	-	87	100.000	ENSLBEG00000028712	trmt12	55	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017456	-	88	55.187	ENSG00000183665	TRMT12	53	55.187	Homo_sapiens
ENSLBEG00000017456	-	89	80.734	ENSAPOG00000011979	trmt12	53	80.734	Acanthochromis_polyacanthus
ENSLBEG00000017456	-	88	56.846	ENSAMEG00000019612	TRMT12	53	56.846	Ailuropoda_melanoleuca
ENSLBEG00000017456	-	87	75.814	ENSACIG00000012982	trmt12	55	75.814	Amphilophus_citrinellus
ENSLBEG00000017456	-	89	79.358	ENSAOCG00000020570	trmt12	56	79.358	Amphiprion_ocellaris
ENSLBEG00000017456	-	89	80.275	ENSAPEG00000006335	trmt12	56	80.275	Amphiprion_percula
ENSLBEG00000017456	-	89	77.982	ENSATEG00000018316	trmt12	54	77.982	Anabas_testudineus
ENSLBEG00000017456	-	89	75.688	ENSACLG00000001008	trmt12	53	75.688	Astatotilapia_calliptera
ENSLBEG00000017456	-	88	67.686	ENSAMXG00000040366	trmt12	54	67.686	Astyanax_mexicanus
ENSLBEG00000017456	-	88	57.500	ENSBTAG00000020398	TRMT12	52	57.083	Bos_taurus
ENSLBEG00000017456	-	87	54.622	ENSCJAG00000022174	TRMT12	53	54.622	Callithrix_jacchus
ENSLBEG00000017456	-	88	55.649	ENSCAFG00000001040	TRMT12	54	55.649	Canis_familiaris
ENSLBEG00000017456	-	88	55.649	ENSCAFG00020006500	TRMT12	54	55.649	Canis_lupus_dingo
ENSLBEG00000017456	-	88	56.723	ENSCHIG00000016574	TRMT12	54	56.723	Capra_hircus
ENSLBEG00000017456	-	88	57.203	ENSCPOG00000026520	TRMT12	53	57.203	Cavia_porcellus
ENSLBEG00000017456	-	87	55.508	ENSCSAG00000018615	TRMT12	53	55.882	Chlorocebus_sabaeus
ENSLBEG00000017456	-	88	57.200	ENSCPBG00000014290	TRMT12	55	57.200	Chrysemys_picta_bellii
ENSLBEG00000017456	-	85	47.926	ENSCING00000019633	-	70	47.926	Ciona_intestinalis
ENSLBEG00000017456	-	87	46.948	ENSCSAVG00000000415	-	63	46.948	Ciona_savignyi
ENSLBEG00000017456	-	88	57.727	ENSCGRG00001014834	Trmt12	52	57.727	Cricetulus_griseus_chok1gshd
ENSLBEG00000017456	-	88	71.300	ENSCSEG00000002675	trmt12	51	71.300	Cynoglossus_semilaevis
ENSLBEG00000017456	-	89	76.147	ENSCVAG00000005590	trmt12	53	76.147	Cyprinodon_variegatus
ENSLBEG00000017456	-	87	70.909	ENSDARG00000060338	trmt12	53	70.909	Danio_rerio
ENSLBEG00000017456	-	88	55.230	ENSETEG00000009373	TRMT12	53	55.230	Echinops_telfairi
ENSLBEG00000017456	-	87	56.356	ENSEASG00005022441	TRMT12	54	56.356	Equus_asinus_asinus
ENSLBEG00000017456	-	88	55.462	ENSEEUG00000004844	TRMT12	53	55.462	Erinaceus_europaeus
ENSLBEG00000017456	-	88	69.124	ENSELUG00000004240	trmt12	58	69.124	Esox_lucius
ENSLBEG00000017456	-	89	57.676	ENSFALG00000003825	TRMT12	83	57.500	Ficedula_albicollis
ENSLBEG00000017456	-	88	56.485	ENSFDAG00000016647	TRMT12	54	56.485	Fukomys_damarensis
ENSLBEG00000017456	-	88	58.525	ENSFHEG00000017338	trmt12	53	58.525	Fundulus_heteroclitus
ENSLBEG00000017456	-	88	58.475	ENSGALG00000006773	TRMT12	52	58.475	Gallus_gallus
ENSLBEG00000017456	-	89	72.936	ENSGAFG00000020056	trmt12	54	72.936	Gambusia_affinis
ENSLBEG00000017456	-	88	70.968	ENSGACG00000017351	trmt12	54	70.968	Gasterosteus_aculeatus
ENSLBEG00000017456	-	88	58.065	ENSGAGG00000006032	TRMT12	56	58.065	Gopherus_agassizii
ENSLBEG00000017456	-	89	75.688	ENSHBUG00000016412	trmt12	53	75.688	Haplochromis_burtoni
ENSLBEG00000017456	-	88	55.230	ENSHGLG00000020498	TRMT12	54	55.230	Heterocephalus_glaber_female
ENSLBEG00000017456	-	88	55.230	ENSHGLG00100020132	TRMT12	54	55.230	Heterocephalus_glaber_male
ENSLBEG00000017456	-	89	77.982	ENSHCOG00000005050	trmt12	63	77.982	Hippocampus_comes
ENSLBEG00000017456	-	87	66.667	ENSIPUG00000018011	trmt12	50	66.368	Ictalurus_punctatus
ENSLBEG00000017456	-	88	55.230	ENSSTOG00000030617	TRMT12	54	55.230	Ictidomys_tridecemlineatus
ENSLBEG00000017456	-	88	72.811	ENSKMAG00000000891	trmt12	52	72.811	Kryptolebias_marmoratus
ENSLBEG00000017456	-	88	58.025	ENSLACG00000015869	TRMT12	54	58.025	Latimeria_chalumnae
ENSLBEG00000017456	-	88	63.182	ENSLOCG00000015290	trmt12	54	63.182	Lepisosteus_oculatus
ENSLBEG00000017456	-	88	54.772	ENSLAFG00000012519	TRMT12	54	54.772	Loxodonta_africana
ENSLBEG00000017456	-	87	55.508	ENSMMUG00000015490	TRMT12	53	55.882	Macaca_mulatta
ENSLBEG00000017456	-	88	78.341	ENSMAMG00000020311	trmt12	54	78.341	Mastacembelus_armatus
ENSLBEG00000017456	-	89	75.688	ENSMZEG00005007349	trmt12	53	75.688	Maylandia_zebra
ENSLBEG00000017456	-	88	57.203	ENSMGAG00000004174	TRMT12	53	57.203	Meleagris_gallopavo
ENSLBEG00000017456	-	88	78.802	ENSMMOG00000000412	trmt12	54	78.802	Mola_mola
ENSLBEG00000017456	-	88	56.637	ENSMODG00000021403	-	52	56.637	Monodelphis_domestica
ENSLBEG00000017456	-	89	77.064	ENSMALG00000008668	trmt12	54	77.064	Monopterus_albus
ENSLBEG00000017456	-	88	55.042	MGP_CAROLIEiJ_G0019820	Trmt12	53	55.042	Mus_caroli
ENSLBEG00000017456	-	88	55.462	ENSMUSG00000037085	Trmt12	53	55.462	Mus_musculus
ENSLBEG00000017456	-	88	57.143	MGP_PahariEiJ_G0019829	Trmt12	53	57.143	Mus_pahari
ENSLBEG00000017456	-	88	55.042	MGP_SPRETEiJ_G0020717	Trmt12	53	55.042	Mus_spretus
ENSLBEG00000017456	-	88	56.432	ENSMPUG00000019150	TRMT12	54	56.432	Mustela_putorius_furo
ENSLBEG00000017456	-	88	56.485	ENSMLUG00000003753	TRMT12	54	56.485	Myotis_lucifugus
ENSLBEG00000017456	-	88	54.393	ENSNGAG00000014548	Trmt12	55	54.393	Nannospalax_galili
ENSLBEG00000017456	-	89	75.229	ENSNBRG00000021510	trmt12	54	75.229	Neolamprologus_brichardi
ENSLBEG00000017456	-	88	52.941	ENSOPRG00000008067	TRMT12	53	52.941	Ochotona_princeps
ENSLBEG00000017456	-	88	55.649	ENSODEG00000018933	TRMT12	54	55.649	Octodon_degus
ENSLBEG00000017456	-	89	76.606	ENSONIG00000002614	trmt12	53	76.606	Oreochromis_niloticus
ENSLBEG00000017456	-	88	48.927	ENSOANG00000009987	TRMT12	52	48.927	Ornithorhynchus_anatinus
ENSLBEG00000017456	-	88	48.333	ENSOCUG00000026379	TRMT12	53	48.333	Oryctolagus_cuniculus
ENSLBEG00000017456	-	89	75.688	ENSORLG00000001280	trmt12	54	75.688	Oryzias_latipes
ENSLBEG00000017456	-	89	75.688	ENSORLG00020000708	trmt12	54	75.688	Oryzias_latipes_hni
ENSLBEG00000017456	-	89	73.394	ENSORLG00015012344	trmt12	54	75.229	Oryzias_latipes_hsok
ENSLBEG00000017456	-	89	74.771	ENSOMEG00000015267	trmt12	53	74.771	Oryzias_melastigma
ENSLBEG00000017456	-	88	56.017	ENSOGAG00000015845	TRMT12	54	56.017	Otolemur_garnettii
ENSLBEG00000017456	-	88	71.296	ENSPKIG00000004640	trmt12	55	71.296	Paramormyrops_kingsleyae
ENSLBEG00000017456	-	88	58.468	ENSPSIG00000003476	TRMT12	92	58.468	Pelodiscus_sinensis
ENSLBEG00000017456	-	88	73.272	ENSPMGG00000016356	trmt12	52	73.272	Periophthalmus_magnuspinnatus
ENSLBEG00000017456	-	87	73.953	ENSPFOG00000016931	trmt12	52	73.953	Poecilia_formosa
ENSLBEG00000017456	-	88	74.194	ENSPLAG00000020621	trmt12	53	74.194	Poecilia_latipinna
ENSLBEG00000017456	-	88	73.733	ENSPMEG00000000818	trmt12	53	73.733	Poecilia_mexicana
ENSLBEG00000017456	-	88	73.733	ENSPREG00000011621	trmt12	54	73.733	Poecilia_reticulata
ENSLBEG00000017456	-	88	55.187	ENSPPYG00000018866	TRMT12	53	55.187	Pongo_abelii
ENSLBEG00000017456	-	88	56.485	ENSPCAG00000000556	TRMT12	54	56.485	Procavia_capensis
ENSLBEG00000017456	-	88	56.067	ENSPVAG00000009149	TRMT12	54	56.067	Pteropus_vampyrus
ENSLBEG00000017456	-	87	76.279	ENSPNYG00000010696	trmt12	55	76.279	Pundamilia_nyererei
ENSLBEG00000017456	-	88	67.401	ENSPNAG00000019028	trmt12	54	67.249	Pygocentrus_nattereri
ENSLBEG00000017456	-	88	56.303	ENSRNOG00000008978	Trmt12	54	56.303	Rattus_norvegicus
ENSLBEG00000017456	-	88	54.867	ENSSHAG00000003345	TRMT12	52	54.867	Sarcophilus_harrisii
ENSLBEG00000017456	-	88	65.179	ENSSFOG00015006090	trmt12	54	65.179	Scleropages_formosus
ENSLBEG00000017456	-	88	79.263	ENSSMAG00000013247	trmt12	54	79.263	Scophthalmus_maximus
ENSLBEG00000017456	-	89	81.193	ENSSDUG00000006168	trmt12	54	81.193	Seriola_dumerili
ENSLBEG00000017456	-	89	81.193	ENSSLDG00000025007	trmt12	54	81.193	Seriola_lalandi_dorsalis
ENSLBEG00000017456	-	87	55.328	ENSSPUG00000005321	TRMT12	54	55.328	Sphenodon_punctatus
ENSLBEG00000017456	-	89	79.358	ENSSPAG00000009435	trmt12	51	79.358	Stegastes_partitus
ENSLBEG00000017456	-	88	57.511	ENSTGUG00000002280	TRMT12	57	58.190	Taeniopygia_guttata
ENSLBEG00000017456	-	88	75.576	ENSTRUG00000011548	trmt12	53	75.576	Takifugu_rubripes
ENSLBEG00000017456	-	87	75.234	ENSTNIG00000016866	trmt12	51	75.234	Tetraodon_nigroviridis
ENSLBEG00000017456	-	88	57.322	ENSUAMG00000002067	TRMT12	55	56.017	Ursus_americanus
ENSLBEG00000017456	-	88	56.485	ENSVPAG00000006519	TRMT12	54	56.485	Vicugna_pacos
ENSLBEG00000017456	-	88	55.230	ENSVVUG00000016790	TRMT12	54	55.230	Vulpes_vulpes
ENSLBEG00000017456	-	88	61.290	ENSXETG00000009641	trmt12	50	61.290	Xenopus_tropicalis
ENSLBEG00000017456	-	89	72.936	ENSXCOG00000016505	trmt12	56	72.936	Xiphophorus_couchianus
ENSLBEG00000017456	-	89	72.936	ENSXMAG00000025318	trmt12	53	72.936	Xiphophorus_maculatus