EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000017559 (Gene tree)
Gene ID: 109992079
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8381 bases
Position: chrFKLU01000221.1:8227-16607
Accession: 109992079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000022962	HARE-HTH	PF05066.13	1.6e-15	1	1
ENSLBEP00000022971	HARE-HTH	PF05066.13	1.8e-15	1	1
ENSLBEP00000023002	HARE-HTH	PF05066.13	5.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024160	-	1608	-	ENSLBEP00000022962	535 (aa)	-	-
ENSLBET00000024169	-	1749	XM_020644561	ENSLBEP00000022971	582 (aa)	XP_020500217	-
ENSLBET00000024200	-	1686	-	ENSLBEP00000023002	561 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000017559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017559	tbrg1	95	90.570	ENSAPOG00000017352	tbrg1	99	90.257	Acanthochromis_polyacanthus
ENSLBEG00000017559	tbrg1	94	85.119	ENSACIG00000021274	tbrg1	100	81.495	Amphilophus_citrinellus
ENSLBEG00000017559	tbrg1	95	89.980	ENSAOCG00000018605	tbrg1	99	89.706	Amphiprion_ocellaris
ENSLBEG00000017559	tbrg1	95	89.980	ENSAPEG00000022443	tbrg1	99	89.706	Amphiprion_percula
ENSLBEG00000017559	tbrg1	95	89.391	ENSATEG00000023537	tbrg1	99	89.154	Anabas_testudineus
ENSLBEG00000017559	tbrg1	99	84.340	ENSACLG00000000281	tbrg1	99	86.765	Astatotilapia_calliptera
ENSLBEG00000017559	tbrg1	98	71.727	ENSAMXG00000008381	tbrg1	99	69.174	Astyanax_mexicanus
ENSLBEG00000017559	tbrg1	94	85.516	ENSCSEG00000002445	tbrg1	99	84.771	Cynoglossus_semilaevis
ENSLBEG00000017559	tbrg1	94	82.515	ENSCVAG00000019626	tbrg1	99	81.434	Cyprinodon_variegatus
ENSLBEG00000017559	tbrg1	97	70.699	ENSDARG00000074996	tbrg1	98	71.800	Danio_rerio
ENSLBEG00000017559	tbrg1	90	49.497	ENSEBUG00000014060	tbrg1	90	48.523	Eptatretus_burgeri
ENSLBEG00000017559	tbrg1	94	81.386	ENSELUG00000017458	tbrg1	99	78.324	Esox_lucius
ENSLBEG00000017559	tbrg1	89	77.328	ENSFHEG00000004283	tbrg1	92	79.002	Fundulus_heteroclitus
ENSLBEG00000017559	tbrg1	94	82.908	ENSGAFG00000000204	tbrg1	99	81.718	Gambusia_affinis
ENSLBEG00000017559	tbrg1	99	84.340	ENSHBUG00000004935	tbrg1	99	86.765	Haplochromis_burtoni
ENSLBEG00000017559	tbrg1	95	77.756	ENSHCOG00000010588	tbrg1	99	76.268	Hippocampus_comes
ENSLBEG00000017559	tbrg1	96	71.622	ENSIPUG00000008697	tbrg1	98	70.000	Ictalurus_punctatus
ENSLBEG00000017559	tbrg1	97	81.992	ENSKMAG00000002775	tbrg1	99	82.752	Kryptolebias_marmoratus
ENSLBEG00000017559	tbrg1	98	72.037	ENSLOCG00000003093	tbrg1	98	72.628	Lepisosteus_oculatus
ENSLBEG00000017559	tbrg1	94	88.713	ENSMAMG00000000876	tbrg1	99	87.868	Mastacembelus_armatus
ENSLBEG00000017559	tbrg1	99	84.151	ENSMZEG00005013545	tbrg1	93	85.688	Maylandia_zebra
ENSLBEG00000017559	tbrg1	94	83.499	ENSMMOG00000005314	tbrg1	93	82.941	Mola_mola
ENSLBEG00000017559	tbrg1	93	89.379	ENSMALG00000011630	tbrg1	99	89.041	Monopterus_albus
ENSLBEG00000017559	tbrg1	95	86.471	ENSNBRG00000017490	tbrg1	99	85.955	Neolamprologus_brichardi
ENSLBEG00000017559	tbrg1	99	84.717	ENSONIG00000005284	tbrg1	99	87.500	Oreochromis_niloticus
ENSLBEG00000017559	tbrg1	95	81.961	ENSORLG00000014519	tbrg1	99	81.434	Oryzias_latipes
ENSLBEG00000017559	tbrg1	95	81.373	ENSORLG00020009567	tbrg1	99	80.882	Oryzias_latipes_hni
ENSLBEG00000017559	tbrg1	95	81.569	ENSORLG00015000448	tbrg1	99	80.882	Oryzias_latipes_hsok
ENSLBEG00000017559	tbrg1	95	83.529	ENSOMEG00000006130	tbrg1	99	83.272	Oryzias_melastigma
ENSLBEG00000017559	tbrg1	94	73.663	ENSPKIG00000012274	tbrg1	94	70.567	Paramormyrops_kingsleyae
ENSLBEG00000017559	tbrg1	92	82.389	ENSPMGG00000015968	tbrg1	99	78.080	Periophthalmus_magnuspinnatus
ENSLBEG00000017559	tbrg1	94	82.908	ENSPFOG00000004279	tbrg1	99	82.084	Poecilia_formosa
ENSLBEG00000017559	tbrg1	94	83.104	ENSPLAG00000001227	tbrg1	99	82.084	Poecilia_latipinna
ENSLBEG00000017559	tbrg1	94	82.711	ENSPMEG00000000955	tbrg1	99	81.901	Poecilia_mexicana
ENSLBEG00000017559	tbrg1	94	82.515	ENSPREG00000005246	tbrg1	99	81.536	Poecilia_reticulata
ENSLBEG00000017559	tbrg1	88	83.475	ENSPNYG00000012625	tbrg1	99	86.134	Pundamilia_nyererei
ENSLBEG00000017559	tbrg1	97	69.275	ENSPNAG00000028332	tbrg1	99	70.553	Pygocentrus_nattereri
ENSLBEG00000017559	tbrg1	93	74.800	ENSSFOG00015009308	tbrg1	99	67.235	Scleropages_formosus
ENSLBEG00000017559	tbrg1	95	86.275	ENSSMAG00000002529	tbrg1	98	86.822	Scophthalmus_maximus
ENSLBEG00000017559	tbrg1	99	88.469	ENSSDUG00000013674	tbrg1	100	90.826	Seriola_dumerili
ENSLBEG00000017559	tbrg1	96	89.443	ENSSLDG00000008932	tbrg1	100	89.443	Seriola_lalandi_dorsalis
ENSLBEG00000017559	tbrg1	85	88.840	ENSSPAG00000004808	tbrg1	99	89.079	Stegastes_partitus
ENSLBEG00000017559	tbrg1	96	80.934	ENSTRUG00000005960	tbrg1	98	82.592	Takifugu_rubripes
ENSLBEG00000017559	tbrg1	94	82.711	ENSXMAG00000001551	tbrg1	99	81.901	Xiphophorus_maculatus