EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000017728 (Gene tree)
Gene ID: 110005151
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6126 bases
Position: chrFKLU01001998.1:8850-14975
Accession: 110005151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023111	RRP36	PF06102.12	1.9e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024315	-	2659	XM_020660594	ENSLBEP00000023111	368 (aa)	XP_020516250	-

Gene Model

Click here to download ENSLBEG00000017728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017728	-	69	46.718	ENSG00000124541	RRP36	88	46.718	Homo_sapiens
ENSLBEG00000017728	-	67	71.951	ENSAPOG00000022015	rrp36	88	65.314	Acanthochromis_polyacanthus
ENSLBEG00000017728	-	98	57.341	ENSACIG00000020578	-	74	61.538	Amphilophus_citrinellus
ENSLBEG00000017728	-	100	61.789	ENSAOCG00000013439	rrp36	73	71.698	Amphiprion_ocellaris
ENSLBEG00000017728	-	100	61.789	ENSAPEG00000020996	rrp36	73	71.698	Amphiprion_percula
ENSLBEG00000017728	-	100	63.271	ENSATEG00000016946	rrp36	69	71.698	Anabas_testudineus
ENSLBEG00000017728	-	65	47.561	ENSANAG00000021773	RRP36	89	45.946	Aotus_nancymaae
ENSLBEG00000017728	-	71	63.218	ENSACLG00000008408	rrp36	99	63.218	Astatotilapia_calliptera
ENSLBEG00000017728	-	67	56.000	ENSACLG00000013982	RRP36	89	56.000	Astatotilapia_calliptera
ENSLBEG00000017728	-	65	47.755	ENSBTAG00000053873	RRP36	93	46.923	Bos_taurus
ENSLBEG00000017728	-	69	45.560	ENSCJAG00000004943	RRP36	90	45.174	Callithrix_jacchus
ENSLBEG00000017728	-	65	47.755	ENSCAFG00020011057	RRP36	94	47.170	Canis_lupus_dingo
ENSLBEG00000017728	-	60	47.577	ENSCHIG00000003210	-	88	47.577	Capra_hircus
ENSLBEG00000017728	-	64	48.333	ENSCHIG00000016354	-	84	47.737	Capra_hircus
ENSLBEG00000017728	-	69	45.211	ENSTSYG00000037176	RRP36	90	44.788	Carlito_syrichta
ENSLBEG00000017728	-	63	47.458	ENSCAPG00000010983	RRP36	89	47.458	Cavia_aperea
ENSLBEG00000017728	-	64	46.862	ENSCPOG00000025932	RRP36	93	46.862	Cavia_porcellus
ENSLBEG00000017728	-	65	47.154	ENSCCAG00000000048	RRP36	89	45.560	Cebus_capucinus
ENSLBEG00000017728	-	71	47.015	ENSCATG00000041903	RRP36	84	47.967	Cercocebus_atys
ENSLBEG00000017728	-	64	48.133	ENSCLAG00000013166	RRP36	98	47.012	Chinchilla_lanigera
ENSLBEG00000017728	-	74	45.683	ENSCSAG00000011553	RRP36	84	47.967	Chlorocebus_sabaeus
ENSLBEG00000017728	-	70	52.091	ENSCPBG00000003555	RRP36	58	53.909	Chrysemys_picta_bellii
ENSLBEG00000017728	-	64	48.750	ENSCANG00000035127	RRP36	83	48.750	Colobus_angolensis_palliatus
ENSLBEG00000017728	-	64	47.679	ENSCGRG00001021461	Rrp36	92	47.280	Cricetulus_griseus_chok1gshd
ENSLBEG00000017728	-	64	47.679	ENSCGRG00000006286	Rrp36	92	47.280	Cricetulus_griseus_crigri
ENSLBEG00000017728	-	93	57.307	ENSCSEG00000001039	RRP36	70	67.442	Cynoglossus_semilaevis
ENSLBEG00000017728	-	67	54.839	ENSCVAG00000017798	rrp36	96	54.839	Cyprinodon_variegatus
ENSLBEG00000017728	-	74	56.044	ENSDARG00000032516	rrp36	66	59.504	Danio_rerio
ENSLBEG00000017728	-	64	45.798	ENSDORG00000012186	Rrp36	91	45.798	Dipodomys_ordii
ENSLBEG00000017728	-	66	30.980	FBgn0038235	CG8461	93	30.769	Drosophila_melanogaster
ENSLBEG00000017728	-	65	47.561	ENSEASG00005003169	RRP36	92	48.333	Equus_asinus_asinus
ENSLBEG00000017728	-	65	47.561	ENSECAG00000040238	RRP36	92	48.333	Equus_caballus
ENSLBEG00000017728	-	96	58.217	ENSELUG00000016840	rrp36	57	77.419	Esox_lucius
ENSLBEG00000017728	-	65	48.163	ENSFCAG00000043818	RRP36	86	48.163	Felis_catus
ENSLBEG00000017728	-	64	46.058	ENSFDAG00000010380	RRP36	98	46.058	Fukomys_damarensis
ENSLBEG00000017728	-	54	61.307	ENSFHEG00000000761	rrp36	85	61.307	Fundulus_heteroclitus
ENSLBEG00000017728	-	99	51.706	ENSGAFG00000017817	rrp36	66	62.595	Gambusia_affinis
ENSLBEG00000017728	-	73	68.015	ENSGACG00000019603	RRP36	71	68.914	Gasterosteus_aculeatus
ENSLBEG00000017728	-	69	46.718	ENSGGOG00000037384	RRP36	91	46.718	Gorilla_gorilla
ENSLBEG00000017728	-	100	55.325	ENSHBUG00000008974	RRP36	73	66.792	Haplochromis_burtoni
ENSLBEG00000017728	-	64	46.888	ENSHGLG00000018082	RRP36	83	46.888	Heterocephalus_glaber_female
ENSLBEG00000017728	-	64	46.888	ENSHGLG00100019303	RRP36	83	46.888	Heterocephalus_glaber_male
ENSLBEG00000017728	-	66	41.152	ENSHCOG00000010303	rrp36	83	40.741	Hippocampus_comes
ENSLBEG00000017728	-	79	47.766	ENSIPUG00000016548	rrp36	69	54.008	Ictalurus_punctatus
ENSLBEG00000017728	-	64	47.303	ENSSTOG00000009511	RRP36	90	47.303	Ictidomys_tridecemlineatus
ENSLBEG00000017728	-	64	47.679	ENSJJAG00000023363	Rrp36	96	46.341	Jaculus_jaculus
ENSLBEG00000017728	-	100	60.519	ENSKMAG00000006968	rrp36	68	69.057	Kryptolebias_marmoratus
ENSLBEG00000017728	-	80	51.178	ENSLACG00000001888	rrp36	65	56.303	Latimeria_chalumnae
ENSLBEG00000017728	-	96	53.425	ENSLOCG00000015862	RRP36	63	63.889	Lepisosteus_oculatus
ENSLBEG00000017728	-	64	47.917	ENSLAFG00000032704	RRP36	98	47.917	Loxodonta_africana
ENSLBEG00000017728	-	71	47.015	ENSMFAG00000003547	RRP36	84	47.967	Macaca_fascicularis
ENSLBEG00000017728	-	71	46.642	ENSMNEG00000044747	RRP36	84	47.561	Macaca_nemestrina
ENSLBEG00000017728	-	71	47.015	ENSMLEG00000034272	RRP36	84	47.967	Mandrillus_leucophaeus
ENSLBEG00000017728	-	92	56.338	ENSMZEG00005015204	RRP36	73	67.170	Maylandia_zebra
ENSLBEG00000017728	-	65	47.500	ENSMAUG00000003648	Rrp36	95	46.694	Mesocricetus_auratus
ENSLBEG00000017728	-	69	44.906	ENSMICG00000045230	RRP36	92	43.346	Microcebus_murinus
ENSLBEG00000017728	-	69	44.531	ENSMOCG00000002009	Rrp36	88	45.868	Microtus_ochrogaster
ENSLBEG00000017728	-	71	63.878	ENSMMOG00000018637	-	68	64.981	Mola_mola
ENSLBEG00000017728	-	100	60.976	ENSMALG00000008142	-	75	70.076	Monopterus_albus
ENSLBEG00000017728	-	70	43.629	MGP_CAROLIEiJ_G0021680	Rrp36	93	43.580	Mus_caroli
ENSLBEG00000017728	-	70	44.402	ENSMUSG00000023971	Rrp36	97	44.622	Mus_musculus
ENSLBEG00000017728	-	64	46.218	MGP_PahariEiJ_G0020671	Rrp36	97	44.841	Mus_pahari
ENSLBEG00000017728	-	70	44.788	MGP_SPRETEiJ_G0022592	Rrp36	93	44.747	Mus_spretus
ENSLBEG00000017728	-	64	48.750	ENSNLEG00000033289	RRP36	98	48.750	Nomascus_leucogenys
ENSLBEG00000017728	-	53	51.020	ENSOPRG00000002274	RRP36	79	47.768	Ochotona_princeps
ENSLBEG00000017728	-	64	46.473	ENSODEG00000015915	RRP36	93	46.473	Octodon_degus
ENSLBEG00000017728	-	100	59.091	ENSONIG00000015983	rrp36	74	68.582	Oreochromis_niloticus
ENSLBEG00000017728	-	70	69.767	ENSORLG00000029500	rrp36	68	69.582	Oryzias_latipes
ENSLBEG00000017728	-	96	58.152	ENSORLG00020017452	-	69	67.803	Oryzias_latipes_hni
ENSLBEG00000017728	-	96	59.178	ENSORLG00015016898	rrp36	69	69.466	Oryzias_latipes_hsok
ENSLBEG00000017728	-	96	61.173	ENSOMEG00000008623	RRP36	69	69.615	Oryzias_melastigma
ENSLBEG00000017728	-	65	44.715	ENSOGAG00000012699	RRP36	94	44.715	Otolemur_garnettii
ENSLBEG00000017728	-	64	40.164	ENSPPAG00000042831	-	83	40.417	Pan_paniscus
ENSLBEG00000017728	-	65	47.755	ENSPPRG00000014610	RRP36	86	47.755	Panthera_pardus
ENSLBEG00000017728	-	65	47.755	ENSPTIG00000010853	RRP36	86	47.755	Panthera_tigris_altaica
ENSLBEG00000017728	-	69	46.718	ENSPTRG00000018184	RRP36	88	46.718	Pan_troglodytes
ENSLBEG00000017728	-	71	47.015	ENSPANG00000025140	RRP36	84	47.967	Papio_anubis
ENSLBEG00000017728	-	92	54.857	ENSPKIG00000004303	rrp36	67	63.178	Paramormyrops_kingsleyae
ENSLBEG00000017728	-	65	61.088	ENSPMGG00000016870	rrp36	68	61.224	Periophthalmus_magnuspinnatus
ENSLBEG00000017728	-	69	44.706	ENSPEMG00000007015	Rrp36	98	44.094	Peromyscus_maniculatus_bairdii
ENSLBEG00000017728	-	65	45.528	ENSPCIG00000009179	RRP36	87	45.528	Phascolarctos_cinereus
ENSLBEG00000017728	-	99	52.219	ENSPFOG00000011959	rrp36	60	62.308	Poecilia_formosa
ENSLBEG00000017728	-	99	52.646	ENSPLAG00000023901	rrp36	66	61.923	Poecilia_latipinna
ENSLBEG00000017728	-	99	50.503	ENSPMEG00000024099	rrp36	65	61.923	Poecilia_mexicana
ENSLBEG00000017728	-	99	50.914	ENSPREG00000022787	rrp36	66	60.769	Poecilia_reticulata
ENSLBEG00000017728	-	64	48.750	ENSPPYG00000016628	RRP36	81	48.750	Pongo_abelii
ENSLBEG00000017728	-	75	40.426	ENSPCOG00000018401	RRP36	86	43.089	Propithecus_coquereli
ENSLBEG00000017728	-	65	45.935	ENSPVAG00000008714	RRP36	88	45.935	Pteropus_vampyrus
ENSLBEG00000017728	-	100	55.584	ENSPNYG00000018030	RRP36	73	67.170	Pundamilia_nyererei
ENSLBEG00000017728	-	92	48.851	ENSPNAG00000027207	rrp36	64	56.420	Pygocentrus_nattereri
ENSLBEG00000017728	-	65	46.058	ENSRNOG00000017836	Rrp36	91	45.098	Rattus_norvegicus
ENSLBEG00000017728	-	65	47.967	ENSRBIG00000040019	RRP36	89	46.718	Rhinopithecus_bieti
ENSLBEG00000017728	-	65	47.561	ENSRROG00000040721	RRP36	89	46.332	Rhinopithecus_roxellana
ENSLBEG00000017728	-	65	47.222	ENSSBOG00000030228	RRP36	86	47.222	Saimiri_boliviensis_boliviensis
ENSLBEG00000017728	-	94	50.427	ENSSFOG00015023058	rrp36	67	60.156	Scleropages_formosus
ENSLBEG00000017728	-	71	69.582	ENSSMAG00000020911	-	65	69.811	Scophthalmus_maximus
ENSLBEG00000017728	-	72	73.585	ENSSDUG00000018924	rrp36	65	73.585	Seriola_dumerili
ENSLBEG00000017728	-	64	73.529	ENSSLDG00000019741	RRP36	98	73.529	Seriola_lalandi_dorsalis
ENSLBEG00000017728	-	64	46.639	ENSSARG00000000873	RRP36	97	46.639	Sorex_araneus
ENSLBEG00000017728	-	66	54.508	ENSSPUG00000000213	RRP36	60	54.065	Sphenodon_punctatus
ENSLBEG00000017728	-	93	49.856	ENSSPAG00000017154	rrp36	98	66.667	Stegastes_partitus
ENSLBEG00000017728	-	69	46.360	ENSSSCG00000001656	RRP36	92	46.360	Sus_scrofa
ENSLBEG00000017728	-	60	36.444	ENSSSCG00000037862	-	84	36.444	Sus_scrofa
ENSLBEG00000017728	-	98	56.986	ENSTRUG00000021893	rrp36	69	63.813	Takifugu_rubripes
ENSLBEG00000017728	-	70	62.069	ENSTNIG00000004741	rrp36	87	62.162	Tetraodon_nigroviridis
ENSLBEG00000017728	-	64	41.736	ENSTBEG00000012326	RRP36	98	41.250	Tupaia_belangeri
ENSLBEG00000017728	-	64	48.333	ENSTTRG00000007001	RRP36	90	46.693	Tursiops_truncatus
ENSLBEG00000017728	-	69	46.538	ENSUAMG00000015865	RRP36	93	46.743	Ursus_americanus
ENSLBEG00000017728	-	51	50.794	ENSUMAG00000008726	RRP36	98	50.794	Ursus_maritimus
ENSLBEG00000017728	-	64	47.917	ENSVPAG00000008904	RRP36	98	47.500	Vicugna_pacos
ENSLBEG00000017728	-	64	48.548	ENSVVUG00000027816	RRP36	94	46.792	Vulpes_vulpes
ENSLBEG00000017728	-	70	59.615	ENSXCOG00000011238	rrp36	89	55.462	Xiphophorus_couchianus
ENSLBEG00000017728	-	70	60.536	ENSXMAG00000013804	rrp36	74	49.466	Xiphophorus_maculatus