EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017764 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 785 bases
Position: chrFKLU01000179.1:897635-898419
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023169	LSM	PF01423.22	6.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024379	-	369	-	ENSLBEP00000023169	122 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000017764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017764	oscp1a	66	36.364	ENSLBEG00000003327	snrpd1	74	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017764	oscp1a	98	62.500	ENSG00000181817	LSM10	98	62.500	Homo_sapiens
ENSLBEG00000017764	oscp1a	98	64.167	ENSAMEG00000019854	LSM10	98	64.167	Ailuropoda_melanoleuca
ENSLBEG00000017764	oscp1a	93	83.186	ENSACIG00000015420	oscp1a	75	83.186	Amphilophus_citrinellus
ENSLBEG00000017764	oscp1a	93	84.071	ENSAOCG00000014654	-	93	84.071	Amphiprion_ocellaris
ENSLBEG00000017764	oscp1a	93	84.071	ENSAOCG00000015618	LSM10	93	84.071	Amphiprion_ocellaris
ENSLBEG00000017764	oscp1a	85	80.769	ENSAOCG00000015607	LSM10	81	80.769	Amphiprion_ocellaris
ENSLBEG00000017764	oscp1a	85	80.769	ENSAPEG00000021851	LSM10	81	80.769	Amphiprion_percula
ENSLBEG00000017764	oscp1a	93	84.071	ENSAPEG00000021845	-	93	84.071	Amphiprion_percula
ENSLBEG00000017764	oscp1a	88	83.178	ENSATEG00000006310	oscp1a	79	83.178	Anabas_testudineus
ENSLBEG00000017764	oscp1a	96	57.265	ENSACAG00000001231	LSM10	95	57.265	Anolis_carolinensis
ENSLBEG00000017764	oscp1a	98	62.500	ENSANAG00000018759	-	98	62.500	Aotus_nancymaae
ENSLBEG00000017764	oscp1a	98	60.833	ENSANAG00000031489	-	98	60.833	Aotus_nancymaae
ENSLBEG00000017764	oscp1a	100	82.927	ENSACLG00000004728	oscp1a	100	82.927	Astatotilapia_calliptera
ENSLBEG00000017764	oscp1a	97	72.881	ENSAMXG00000025301	oscp1a	98	72.881	Astyanax_mexicanus
ENSLBEG00000017764	oscp1a	98	61.667	ENSBTAG00000024096	LSM10	98	61.667	Bos_taurus
ENSLBEG00000017764	oscp1a	98	62.500	ENSCJAG00000044880	LSM10	98	62.500	Callithrix_jacchus
ENSLBEG00000017764	oscp1a	98	64.167	ENSCAFG00000003382	LSM10	98	64.167	Canis_familiaris
ENSLBEG00000017764	oscp1a	98	64.167	ENSCAFG00020008920	LSM10	98	64.167	Canis_lupus_dingo
ENSLBEG00000017764	oscp1a	98	61.667	ENSCHIG00000009398	LSM10	98	61.667	Capra_hircus
ENSLBEG00000017764	oscp1a	98	65.833	ENSCAPG00000012567	LSM10	98	65.833	Cavia_aperea
ENSLBEG00000017764	oscp1a	98	65.833	ENSCPOG00000039302	LSM10	98	65.833	Cavia_porcellus
ENSLBEG00000017764	oscp1a	98	60.000	ENSCCAG00000008378	-	98	60.000	Cebus_capucinus
ENSLBEG00000017764	oscp1a	98	62.500	ENSCCAG00000018913	-	98	62.500	Cebus_capucinus
ENSLBEG00000017764	oscp1a	98	63.333	ENSCATG00000006589	LSM10	98	63.333	Cercocebus_atys
ENSLBEG00000017764	oscp1a	98	64.167	ENSCLAG00000008633	LSM10	98	64.167	Chinchilla_lanigera
ENSLBEG00000017764	oscp1a	98	63.333	ENSCSAG00000000134	LSM10	98	63.333	Chlorocebus_sabaeus
ENSLBEG00000017764	oscp1a	98	62.295	ENSCHOG00000008615	LSM10	98	62.295	Choloepus_hoffmanni
ENSLBEG00000017764	oscp1a	81	30.303	ENSCSAVG00000001896	-	85	30.303	Ciona_savignyi
ENSLBEG00000017764	oscp1a	98	63.333	ENSCANG00000019928	LSM10	98	63.333	Colobus_angolensis_palliatus
ENSLBEG00000017764	oscp1a	98	65.000	ENSCGRG00001004317	-	98	65.000	Cricetulus_griseus_chok1gshd
ENSLBEG00000017764	oscp1a	87	62.037	ENSCGRG00001022673	-	88	62.037	Cricetulus_griseus_chok1gshd
ENSLBEG00000017764	oscp1a	98	65.000	ENSCGRG00000014935	-	98	65.000	Cricetulus_griseus_crigri
ENSLBEG00000017764	oscp1a	87	62.037	ENSCGRG00000015514	-	88	62.037	Cricetulus_griseus_crigri
ENSLBEG00000017764	oscp1a	93	79.646	ENSCSEG00000010374	oscp1a	75	80.357	Cynoglossus_semilaevis
ENSLBEG00000017764	oscp1a	91	77.477	ENSCVAG00000001536	oscp1a	84	77.477	Cyprinodon_variegatus
ENSLBEG00000017764	oscp1a	91	72.072	ENSDARG00000101222	oscp1a	92	72.072	Danio_rerio
ENSLBEG00000017764	oscp1a	62	71.053	ENSDARG00000109563	CABZ01074453.1	88	71.053	Danio_rerio
ENSLBEG00000017764	oscp1a	98	63.333	ENSDNOG00000036662	LSM10	98	63.333	Dasypus_novemcinctus
ENSLBEG00000017764	oscp1a	98	65.000	ENSDORG00000007579	Lsm10	98	65.000	Dipodomys_ordii
ENSLBEG00000017764	oscp1a	98	63.333	ENSETEG00000005703	LSM10	98	63.333	Echinops_telfairi
ENSLBEG00000017764	oscp1a	96	53.846	ENSEBUG00000001312	oscp1a	96	53.846	Eptatretus_burgeri
ENSLBEG00000017764	oscp1a	98	63.333	ENSEASG00005012194	LSM10	98	63.333	Equus_asinus_asinus
ENSLBEG00000017764	oscp1a	98	63.333	ENSECAG00000005071	LSM10	98	63.333	Equus_caballus
ENSLBEG00000017764	oscp1a	98	63.333	ENSEEUG00000012032	LSM10	98	63.333	Erinaceus_europaeus
ENSLBEG00000017764	oscp1a	92	80.357	ENSELUG00000007452	oscp1a	92	80.357	Esox_lucius
ENSLBEG00000017764	oscp1a	96	64.103	ENSFALG00000000851	LSM10	95	64.103	Ficedula_albicollis
ENSLBEG00000017764	oscp1a	98	65.000	ENSFDAG00000021056	LSM10	98	65.000	Fukomys_damarensis
ENSLBEG00000017764	oscp1a	93	79.130	ENSFHEG00000001058	oscp1a	99	79.130	Fundulus_heteroclitus
ENSLBEG00000017764	oscp1a	89	71.560	ENSGMOG00000019832	oscp1a	92	71.560	Gadus_morhua
ENSLBEG00000017764	oscp1a	96	64.957	ENSGALG00000002127	LSM10	95	64.957	Gallus_gallus
ENSLBEG00000017764	oscp1a	96	64.167	ENSGAFG00000016445	oscp1a	98	64.167	Gambusia_affinis
ENSLBEG00000017764	oscp1a	93	85.088	ENSGACG00000002329	oscp1a	93	85.088	Gasterosteus_aculeatus
ENSLBEG00000017764	oscp1a	98	63.025	ENSGAGG00000024848	LSM10	97	63.025	Gopherus_agassizii
ENSLBEG00000017764	oscp1a	98	62.500	ENSGGOG00000003556	LSM10	98	62.500	Gorilla_gorilla
ENSLBEG00000017764	oscp1a	100	83.740	ENSHBUG00000001722	oscp1a	100	83.740	Haplochromis_burtoni
ENSLBEG00000017764	oscp1a	98	64.167	ENSHGLG00000011625	LSM10	98	64.167	Heterocephalus_glaber_female
ENSLBEG00000017764	oscp1a	98	64.167	ENSHGLG00100001769	LSM10	98	64.167	Heterocephalus_glaber_male
ENSLBEG00000017764	oscp1a	83	73.267	ENSIPUG00000005808	oscp1a	88	73.267	Ictalurus_punctatus
ENSLBEG00000017764	oscp1a	98	64.167	ENSSTOG00000000606	LSM10	98	64.167	Ictidomys_tridecemlineatus
ENSLBEG00000017764	oscp1a	93	83.333	ENSKMAG00000012143	oscp1a	94	83.333	Kryptolebias_marmoratus
ENSLBEG00000017764	oscp1a	98	61.345	ENSLACG00000015904	LSM10	92	61.345	Latimeria_chalumnae
ENSLBEG00000017764	oscp1a	100	70.492	ENSLOCG00000018277	oscp1a	100	70.492	Lepisosteus_oculatus
ENSLBEG00000017764	oscp1a	98	64.167	ENSLAFG00000009600	LSM10	98	64.167	Loxodonta_africana
ENSLBEG00000017764	oscp1a	98	63.333	ENSMFAG00000009115	LSM10	98	63.333	Macaca_fascicularis
ENSLBEG00000017764	oscp1a	98	63.333	ENSMMUG00000017338	LSM10	98	63.333	Macaca_mulatta
ENSLBEG00000017764	oscp1a	98	63.333	ENSMNEG00000020023	LSM10	98	63.333	Macaca_nemestrina
ENSLBEG00000017764	oscp1a	98	63.333	ENSMLEG00000025150	LSM10	98	63.333	Mandrillus_leucophaeus
ENSLBEG00000017764	oscp1a	100	77.869	ENSMAMG00000004427	oscp1a	100	77.869	Mastacembelus_armatus
ENSLBEG00000017764	oscp1a	100	82.927	ENSMZEG00005026307	oscp1a	100	82.927	Maylandia_zebra
ENSLBEG00000017764	oscp1a	97	63.559	ENSMGAG00000015707	LSM10	96	63.559	Meleagris_gallopavo
ENSLBEG00000017764	oscp1a	98	65.833	ENSMAUG00000016624	Lsm10	98	65.833	Mesocricetus_auratus
ENSLBEG00000017764	oscp1a	98	65.000	ENSMOCG00000021943	Lsm10	98	65.000	Microtus_ochrogaster
ENSLBEG00000017764	oscp1a	89	85.185	ENSMMOG00000013597	oscp1a	81	85.185	Mola_mola
ENSLBEG00000017764	oscp1a	98	66.667	ENSMODG00000023328	LSM10	98	66.667	Monodelphis_domestica
ENSLBEG00000017764	oscp1a	98	64.167	MGP_CAROLIEiJ_G0026467	Lsm10	100	64.516	Mus_caroli
ENSLBEG00000017764	oscp1a	98	64.167	ENSMUSG00000050188	Lsm10	100	64.516	Mus_musculus
ENSLBEG00000017764	oscp1a	98	64.167	MGP_PahariEiJ_G0028798	Lsm10	100	64.516	Mus_pahari
ENSLBEG00000017764	oscp1a	98	64.167	MGP_SPRETEiJ_G0027446	Lsm10	100	64.516	Mus_spretus
ENSLBEG00000017764	oscp1a	98	64.167	ENSMPUG00000018593	LSM10	98	64.167	Mustela_putorius_furo
ENSLBEG00000017764	oscp1a	98	63.333	ENSMLUG00000023895	LSM10	98	63.333	Myotis_lucifugus
ENSLBEG00000017764	oscp1a	98	63.333	ENSNGAG00000015011	Lsm10	98	63.333	Nannospalax_galili
ENSLBEG00000017764	oscp1a	93	86.842	ENSNBRG00000014306	oscp1a	93	86.842	Neolamprologus_brichardi
ENSLBEG00000017764	oscp1a	98	62.500	ENSNLEG00000033754	LSM10	98	62.500	Nomascus_leucogenys
ENSLBEG00000017764	oscp1a	98	67.500	ENSMEUG00000006313	LSM10	98	67.500	Notamacropus_eugenii
ENSLBEG00000017764	oscp1a	98	65.000	ENSOPRG00000001699	LSM10	98	65.000	Ochotona_princeps
ENSLBEG00000017764	oscp1a	98	64.167	ENSODEG00000019161	LSM10	98	64.167	Octodon_degus
ENSLBEG00000017764	oscp1a	93	86.842	ENSONIG00000020904	oscp1a	93	86.842	Oreochromis_niloticus
ENSLBEG00000017764	oscp1a	98	65.000	ENSOANG00000002066	LSM10	98	65.000	Ornithorhynchus_anatinus
ENSLBEG00000017764	oscp1a	98	63.333	ENSOCUG00000005333	LSM10	98	63.333	Oryctolagus_cuniculus
ENSLBEG00000017764	oscp1a	93	83.333	ENSORLG00000009504	oscp1a	94	83.333	Oryzias_latipes
ENSLBEG00000017764	oscp1a	93	83.333	ENSORLG00020016201	oscp1a	94	83.333	Oryzias_latipes_hni
ENSLBEG00000017764	oscp1a	93	82.456	ENSORLG00015007794	oscp1a	94	82.456	Oryzias_latipes_hsok
ENSLBEG00000017764	oscp1a	98	64.167	ENSOGAG00000002653	LSM10	98	64.167	Otolemur_garnettii
ENSLBEG00000017764	oscp1a	98	61.667	ENSOARG00000009596	LSM10	98	61.667	Ovis_aries
ENSLBEG00000017764	oscp1a	98	62.500	ENSPPAG00000023465	LSM10	98	62.500	Pan_paniscus
ENSLBEG00000017764	oscp1a	98	63.333	ENSPPRG00000014619	LSM10	98	63.333	Panthera_pardus
ENSLBEG00000017764	oscp1a	98	63.333	ENSPTIG00000004613	LSM10	98	63.333	Panthera_tigris_altaica
ENSLBEG00000017764	oscp1a	98	62.500	ENSPTRG00000000539	LSM10	98	62.500	Pan_troglodytes
ENSLBEG00000017764	oscp1a	98	63.333	ENSPANG00000023172	LSM10	98	63.333	Papio_anubis
ENSLBEG00000017764	oscp1a	99	69.421	ENSPKIG00000003728	oscp1a	98	69.421	Paramormyrops_kingsleyae
ENSLBEG00000017764	oscp1a	98	62.185	ENSPSIG00000000590	LSM10	97	62.185	Pelodiscus_sinensis
ENSLBEG00000017764	oscp1a	57	72.464	ENSPMGG00000015718	oscp1a	90	72.464	Periophthalmus_magnuspinnatus
ENSLBEG00000017764	oscp1a	84	67.961	ENSPCIG00000014865	LSM10	76	67.961	Phascolarctos_cinereus
ENSLBEG00000017764	oscp1a	89	71.560	ENSPFOG00000020490	oscp1a	92	71.560	Poecilia_formosa
ENSLBEG00000017764	oscp1a	93	69.298	ENSPLAG00000016537	oscp1a	87	69.298	Poecilia_latipinna
ENSLBEG00000017764	oscp1a	93	68.421	ENSPMEG00000000174	oscp1a	99	68.421	Poecilia_mexicana
ENSLBEG00000017764	oscp1a	93	69.298	ENSPREG00000009899	oscp1a	87	69.298	Poecilia_reticulata
ENSLBEG00000017764	oscp1a	98	62.500	ENSPPYG00000001539	LSM10	98	62.500	Pongo_abelii
ENSLBEG00000017764	oscp1a	100	63.115	ENSPCAG00000002520	LSM10	100	63.115	Procavia_capensis
ENSLBEG00000017764	oscp1a	98	65.000	ENSPVAG00000008644	LSM10	98	65.000	Pteropus_vampyrus
ENSLBEG00000017764	oscp1a	100	83.740	ENSPNYG00000003138	oscp1a	100	83.740	Pundamilia_nyererei
ENSLBEG00000017764	oscp1a	93	75.439	ENSPNAG00000028829	oscp1a	94	75.439	Pygocentrus_nattereri
ENSLBEG00000017764	oscp1a	98	63.333	ENSRNOG00000025716	Lsm10	98	63.333	Rattus_norvegicus
ENSLBEG00000017764	oscp1a	98	63.333	ENSRBIG00000001561	LSM10	98	63.333	Rhinopithecus_bieti
ENSLBEG00000017764	oscp1a	98	63.333	ENSRROG00000011414	LSM10	98	63.333	Rhinopithecus_roxellana
ENSLBEG00000017764	oscp1a	98	62.500	ENSSBOG00000036413	-	98	62.500	Saimiri_boliviensis_boliviensis
ENSLBEG00000017764	oscp1a	98	67.500	ENSSHAG00000018056	LSM10	98	67.500	Sarcophilus_harrisii
ENSLBEG00000017764	oscp1a	98	65.833	ENSSFOG00015019954	lsm10	92	68.750	Scleropages_formosus
ENSLBEG00000017764	oscp1a	93	85.965	ENSSMAG00000001297	oscp1a	97	85.965	Scophthalmus_maximus
ENSLBEG00000017764	oscp1a	93	80.702	ENSSDUG00000007090	oscp1a	93	80.702	Seriola_dumerili
ENSLBEG00000017764	oscp1a	93	79.825	ENSSLDG00000000800	oscp1a	94	79.825	Seriola_lalandi_dorsalis
ENSLBEG00000017764	oscp1a	98	63.934	ENSSARG00000004211	LSM10	98	63.934	Sorex_araneus
ENSLBEG00000017764	oscp1a	93	84.211	ENSSPAG00000009229	oscp1a	94	84.211	Stegastes_partitus
ENSLBEG00000017764	oscp1a	98	62.500	ENSSSCG00000038916	LSM10	98	62.500	Sus_scrofa
ENSLBEG00000017764	oscp1a	97	63.559	ENSTGUG00000001600	-	97	63.559	Taeniopygia_guttata
ENSLBEG00000017764	oscp1a	97	64.407	ENSTGUG00000001602	-	97	64.407	Taeniopygia_guttata
ENSLBEG00000017764	oscp1a	94	73.913	ENSTRUG00000010531	oscp1a	93	73.913	Takifugu_rubripes
ENSLBEG00000017764	oscp1a	99	63.636	ENSTBEG00000016674	LSM10	98	63.636	Tupaia_belangeri
ENSLBEG00000017764	oscp1a	98	64.167	ENSUAMG00000020265	LSM10	98	64.167	Ursus_americanus
ENSLBEG00000017764	oscp1a	98	64.167	ENSUMAG00000001438	LSM10	55	64.167	Ursus_maritimus
ENSLBEG00000017764	oscp1a	98	64.167	ENSVVUG00000023209	LSM10	98	64.167	Vulpes_vulpes
ENSLBEG00000017764	oscp1a	96	64.103	ENSXETG00000027631	lsm10	95	64.103	Xenopus_tropicalis
ENSLBEG00000017764	oscp1a	91	72.072	ENSXCOG00000018776	oscp1a	70	72.072	Xiphophorus_couchianus
ENSLBEG00000017764	oscp1a	92	72.321	ENSXMAG00000019963	oscp1a	90	72.321	Xiphophorus_maculatus