EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017769 (Gene tree)
Gene ID: 109996619
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3926 bases
Position: chrFKLU01000374.1:327903-331828
Accession: 109996619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023171	zf-C2H2	PF00096.26	8.2e-13	1	2
ENSLBEP00000023171	zf-C2H2	PF00096.26	8.2e-13	2	2
ENSLBEP00000023171	zf-met	PF12874.7	9.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024381	-	2078	XM_020650838	ENSLBEP00000023171	377 (aa)	XP_020506494	UPI0009B36CC9

Gene Model

Click here to download ENSLBEG00000017769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017769	prdm12b	67	42.105	ENSLBEG00000022736	prdm5	92	42.105
ENSLBEG00000017769	prdm12b	100	79.843	ENSLBEG00000007776	-	100	80.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017769	prdm12b	88	84.132	ENSG00000130711	PRDM12	99	77.249	Homo_sapiens
ENSLBEG00000017769	prdm12b	100	66.142	ENSAPOG00000018234	-	100	66.142	Acanthochromis_polyacanthus
ENSLBEG00000017769	prdm12b	100	88.946	ENSAPOG00000016051	prdm12b	100	88.946	Acanthochromis_polyacanthus
ENSLBEG00000017769	prdm12b	88	82.583	ENSAMEG00000016234	PRDM12	99	81.982	Ailuropoda_melanoleuca
ENSLBEG00000017769	prdm12b	100	79.028	ENSACIG00000005193	-	100	79.028	Amphilophus_citrinellus
ENSLBEG00000017769	prdm12b	100	87.013	ENSACIG00000019578	prdm12b	100	87.532	Amphilophus_citrinellus
ENSLBEG00000017769	prdm12b	100	88.831	ENSAOCG00000015040	prdm12b	100	88.571	Amphiprion_ocellaris
ENSLBEG00000017769	prdm12b	100	89.529	ENSAPEG00000015092	prdm12b	100	89.529	Amphiprion_percula
ENSLBEG00000017769	prdm12b	100	73.858	ENSAPEG00000022849	-	99	74.112	Amphiprion_percula
ENSLBEG00000017769	prdm12b	100	80.206	ENSATEG00000014595	-	96	85.030	Anabas_testudineus
ENSLBEG00000017769	prdm12b	92	81.375	ENSANAG00000020616	PRDM12	95	83.832	Aotus_nancymaae
ENSLBEG00000017769	prdm12b	100	77.889	ENSACLG00000007631	-	100	78.643	Astatotilapia_calliptera
ENSLBEG00000017769	prdm12b	100	86.316	ENSACLG00000011876	prdm12b	100	86.316	Astatotilapia_calliptera
ENSLBEG00000017769	prdm12b	100	82.275	ENSAMXG00000033665	prdm12b	100	83.598	Astyanax_mexicanus
ENSLBEG00000017769	prdm12b	100	80.688	ENSAMXG00000008540	PRDM12	100	79.894	Astyanax_mexicanus
ENSLBEG00000017769	prdm12b	88	84.132	ENSBTAG00000023797	PRDM12	99	77.249	Bos_taurus
ENSLBEG00000017769	prdm12b	88	84.132	ENSCJAG00000020540	PRDM12	99	77.249	Callithrix_jacchus
ENSLBEG00000017769	prdm12b	77	84.247	ENSCAFG00000023076	PRDM12	99	75.893	Canis_familiaris
ENSLBEG00000017769	prdm12b	88	84.132	ENSCAFG00020024046	PRDM12	99	76.720	Canis_lupus_dingo
ENSLBEG00000017769	prdm12b	88	84.132	ENSCHIG00000025005	PRDM12	99	76.984	Capra_hircus
ENSLBEG00000017769	prdm12b	85	82.919	ENSCPOG00000005901	PRDM12	95	82.919	Cavia_porcellus
ENSLBEG00000017769	prdm12b	88	84.132	ENSCCAG00000037485	PRDM12	99	76.984	Cebus_capucinus
ENSLBEG00000017769	prdm12b	88	84.132	ENSCATG00000020327	PRDM12	99	76.984	Cercocebus_atys
ENSLBEG00000017769	prdm12b	88	83.234	ENSCLAG00000005499	PRDM12	89	83.234	Chinchilla_lanigera
ENSLBEG00000017769	prdm12b	88	84.132	ENSCSAG00000014756	PRDM12	99	76.720	Chlorocebus_sabaeus
ENSLBEG00000017769	prdm12b	100	78.042	ENSCPBG00000022628	PRDM12	99	77.513	Chrysemys_picta_bellii
ENSLBEG00000017769	prdm12b	88	84.132	ENSCGRG00001015005	Prdm12	99	76.984	Cricetulus_griseus_chok1gshd
ENSLBEG00000017769	prdm12b	100	88.624	ENSCVAG00000017166	prdm12b	100	88.889	Cyprinodon_variegatus
ENSLBEG00000017769	prdm12b	100	78.316	ENSCVAG00000000944	-	100	78.571	Cyprinodon_variegatus
ENSLBEG00000017769	prdm12b	100	82.804	ENSDARG00000007430	prdm12b	100	82.804	Danio_rerio
ENSLBEG00000017769	prdm12b	88	83.582	ENSDNOG00000042302	PRDM12	99	76.517	Dasypus_novemcinctus
ENSLBEG00000017769	prdm12b	86	64.809	ENSEBUG00000016780	prdm12b	83	60.590	Eptatretus_burgeri
ENSLBEG00000017769	prdm12b	92	81.375	ENSEASG00005008472	PRDM12	99	77.513	Equus_asinus_asinus
ENSLBEG00000017769	prdm12b	94	80.282	ENSECAG00000005933	PRDM12	99	76.984	Equus_caballus
ENSLBEG00000017769	prdm12b	100	81.510	ENSELUG00000013674	PRDM12	100	81.771	Esox_lucius
ENSLBEG00000017769	prdm12b	100	81.963	ENSELUG00000009905	prdm12b	100	81.963	Esox_lucius
ENSLBEG00000017769	prdm12b	88	84.132	ENSFCAG00000043086	PRDM12	99	76.984	Felis_catus
ENSLBEG00000017769	prdm12b	100	78.249	ENSFALG00000001445	PRDM12	89	77.719	Ficedula_albicollis
ENSLBEG00000017769	prdm12b	100	76.060	ENSFHEG00000007746	-	100	75.561	Fundulus_heteroclitus
ENSLBEG00000017769	prdm12b	100	88.976	ENSFHEG00000003944	prdm12b	100	88.976	Fundulus_heteroclitus
ENSLBEG00000017769	prdm12b	88	91.018	ENSGMOG00000011797	prdm12b	100	85.564	Gadus_morhua
ENSLBEG00000017769	prdm12b	100	78.249	ENSGALG00000003895	PRDM12	99	77.719	Gallus_gallus
ENSLBEG00000017769	prdm12b	100	88.654	ENSGAFG00000010827	prdm12b	99	89.446	Gambusia_affinis
ENSLBEG00000017769	prdm12b	100	91.777	ENSGACG00000016713	prdm12b	99	90.716	Gasterosteus_aculeatus
ENSLBEG00000017769	prdm12b	100	78.042	ENSGAGG00000014083	PRDM12	99	77.513	Gopherus_agassizii
ENSLBEG00000017769	prdm12b	88	83.832	ENSGGOG00000010568	PRDM12	99	76.720	Gorilla_gorilla
ENSLBEG00000017769	prdm12b	100	88.773	ENSHBUG00000022878	prdm12b	100	87.990	Haplochromis_burtoni
ENSLBEG00000017769	prdm12b	100	78.141	ENSHBUG00000022537	-	93	78.643	Haplochromis_burtoni
ENSLBEG00000017769	prdm12b	88	83.533	ENSHGLG00000013939	PRDM12	99	76.455	Heterocephalus_glaber_female
ENSLBEG00000017769	prdm12b	100	71.948	ENSHCOG00000021167	-	100	70.390	Hippocampus_comes
ENSLBEG00000017769	prdm12b	88	88.596	ENSHCOG00000003663	prdm12b	100	82.398	Hippocampus_comes
ENSLBEG00000017769	prdm12b	100	78.249	ENSIPUG00000019544	PRDM12	100	78.249	Ictalurus_punctatus
ENSLBEG00000017769	prdm12b	100	83.333	ENSIPUG00000017053	prdm12b	100	83.333	Ictalurus_punctatus
ENSLBEG00000017769	prdm12b	94	80.282	ENSSTOG00000005986	PRDM12	85	83.832	Ictidomys_tridecemlineatus
ENSLBEG00000017769	prdm12b	88	83.832	ENSJJAG00000005424	Prdm12	98	83.832	Jaculus_jaculus
ENSLBEG00000017769	prdm12b	100	76.611	ENSKMAG00000016921	prdm12b	100	80.296	Kryptolebias_marmoratus
ENSLBEG00000017769	prdm12b	94	78.333	ENSKMAG00000021205	-	94	77.198	Kryptolebias_marmoratus
ENSLBEG00000017769	prdm12b	100	78.571	ENSLACG00000017560	PRDM12	99	77.778	Latimeria_chalumnae
ENSLBEG00000017769	prdm12b	100	80.159	ENSLOCG00000005429	prdm12b	100	80.362	Lepisosteus_oculatus
ENSLBEG00000017769	prdm12b	88	84.132	ENSLAFG00000006979	PRDM12	88	82.891	Loxodonta_africana
ENSLBEG00000017769	prdm12b	88	84.132	ENSMFAG00000040322	PRDM12	99	76.984	Macaca_fascicularis
ENSLBEG00000017769	prdm12b	88	84.132	ENSMNEG00000037234	PRDM12	99	76.984	Macaca_nemestrina
ENSLBEG00000017769	prdm12b	100	91.053	ENSMAMG00000013212	prdm12b	100	91.316	Mastacembelus_armatus
ENSLBEG00000017769	prdm12b	100	75.312	ENSMAMG00000018988	-	100	75.561	Mastacembelus_armatus
ENSLBEG00000017769	prdm12b	100	77.500	ENSMZEG00005000415	PRDM12	100	78.250	Maylandia_zebra
ENSLBEG00000017769	prdm12b	95	80.168	ENSMGAG00000005438	PRDM12	91	84.384	Meleagris_gallopavo
ENSLBEG00000017769	prdm12b	100	77.249	ENSMAUG00000013040	Prdm12	99	76.720	Mesocricetus_auratus
ENSLBEG00000017769	prdm12b	88	84.132	ENSMICG00000015480	PRDM12	90	83.832	Microcebus_murinus
ENSLBEG00000017769	prdm12b	99	77.748	ENSMOCG00000021026	Prdm12	89	84.132	Microtus_ochrogaster
ENSLBEG00000017769	prdm12b	100	78.042	ENSMODG00000012108	PRDM12	99	78.042	Monodelphis_domestica
ENSLBEG00000017769	prdm12b	100	76.393	ENSMALG00000021901	prdm12b	99	75.332	Monopterus_albus
ENSLBEG00000017769	prdm12b	88	84.132	MGP_CAROLIEiJ_G0023414	Prdm12	99	76.984	Mus_caroli
ENSLBEG00000017769	prdm12b	88	84.132	ENSMUSG00000079466	Prdm12	99	76.984	Mus_musculus
ENSLBEG00000017769	prdm12b	88	84.132	MGP_PahariEiJ_G0024871	Prdm12	99	76.984	Mus_pahari
ENSLBEG00000017769	prdm12b	88	84.132	MGP_SPRETEiJ_G0024331	Prdm12	99	76.984	Mus_spretus
ENSLBEG00000017769	prdm12b	88	83.832	ENSNGAG00000018480	Prdm12	92	83.533	Nannospalax_galili
ENSLBEG00000017769	prdm12b	100	86.528	ENSNBRG00000006727	prdm12b	100	87.047	Neolamprologus_brichardi
ENSLBEG00000017769	prdm12b	100	72.423	ENSNBRG00000024312	-	100	72.680	Neolamprologus_brichardi
ENSLBEG00000017769	prdm12b	100	69.577	ENSMEUG00000003828	PRDM12	99	69.841	Notamacropus_eugenii
ENSLBEG00000017769	prdm12b	88	83.832	ENSOPRG00000008680	PRDM12	98	83.533	Ochotona_princeps
ENSLBEG00000017769	prdm12b	92	80.802	ENSODEG00000016282	PRDM12	61	83.533	Octodon_degus
ENSLBEG00000017769	prdm12b	64	74.793	ENSOANG00000001043	PRDM12	100	73.554	Ornithorhynchus_anatinus
ENSLBEG00000017769	prdm12b	82	83.442	ENSOCUG00000008241	PRDM12	96	83.117	Oryctolagus_cuniculus
ENSLBEG00000017769	prdm12b	100	86.010	ENSORLG00000007114	prdm12b	99	85.751	Oryzias_latipes
ENSLBEG00000017769	prdm12b	100	79.082	ENSORLG00000017558	-	100	79.082	Oryzias_latipes
ENSLBEG00000017769	prdm12b	100	85.974	ENSORLG00020019565	prdm12b	99	86.528	Oryzias_latipes_hni
ENSLBEG00000017769	prdm12b	100	78.880	ENSORLG00020013167	-	100	78.880	Oryzias_latipes_hni
ENSLBEG00000017769	prdm12b	100	85.195	ENSORLG00015007621	prdm12b	99	86.269	Oryzias_latipes_hsok
ENSLBEG00000017769	prdm12b	100	79.082	ENSORLG00015003435	-	100	79.082	Oryzias_latipes_hsok
ENSLBEG00000017769	prdm12b	100	85.861	ENSOMEG00000004134	prdm12b	99	85.861	Oryzias_melastigma
ENSLBEG00000017769	prdm12b	100	77.387	ENSOMEG00000007762	-	100	77.387	Oryzias_melastigma
ENSLBEG00000017769	prdm12b	88	84.132	ENSOGAG00000007557	PRDM12	97	83.832	Otolemur_garnettii
ENSLBEG00000017769	prdm12b	78	82.095	ENSPPAG00000031506	-	99	80.795	Pan_paniscus
ENSLBEG00000017769	prdm12b	100	71.240	ENSPPRG00000023024	PRDM12	83	77.313	Panthera_pardus
ENSLBEG00000017769	prdm12b	88	84.132	ENSPTRG00000021475	PRDM12	99	76.984	Pan_troglodytes
ENSLBEG00000017769	prdm12b	88	84.132	ENSPTRG00000043324	-	99	76.984	Pan_troglodytes
ENSLBEG00000017769	prdm12b	88	84.132	ENSPANG00000025967	PRDM12	99	76.984	Papio_anubis
ENSLBEG00000017769	prdm12b	93	77.273	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSLBEG00000017769	prdm12b	100	81.530	ENSPKIG00000007228	prdm12b	100	82.322	Paramormyrops_kingsleyae
ENSLBEG00000017769	prdm12b	100	78.307	ENSPSIG00000006739	PRDM12	99	77.778	Pelodiscus_sinensis
ENSLBEG00000017769	prdm12b	100	88.391	ENSPMGG00000008867	prdm12b	99	88.391	Periophthalmus_magnuspinnatus
ENSLBEG00000017769	prdm12b	100	74.365	ENSPMGG00000002356	-	100	74.112	Periophthalmus_magnuspinnatus
ENSLBEG00000017769	prdm12b	95	78.533	ENSPEMG00000009969	Prdm12	89	83.832	Peromyscus_maniculatus_bairdii
ENSLBEG00000017769	prdm12b	100	78.042	ENSPCIG00000024119	PRDM12	99	78.042	Phascolarctos_cinereus
ENSLBEG00000017769	prdm12b	100	87.632	ENSPFOG00000019841	prdm12b	100	87.105	Poecilia_formosa
ENSLBEG00000017769	prdm12b	100	88.158	ENSPLAG00000016626	prdm12b	99	88.743	Poecilia_latipinna
ENSLBEG00000017769	prdm12b	96	88.315	ENSPMEG00000016698	prdm12b	99	89.130	Poecilia_mexicana
ENSLBEG00000017769	prdm12b	95	73.243	ENSPREG00000003211	-	94	72.973	Poecilia_reticulata
ENSLBEG00000017769	prdm12b	100	87.467	ENSPREG00000015073	prdm12b	99	88.512	Poecilia_reticulata
ENSLBEG00000017769	prdm12b	95	80.000	ENSPPYG00000019694	PRDM12	92	83.832	Pongo_abelii
ENSLBEG00000017769	prdm12b	88	84.132	ENSPCOG00000022255	PRDM12	99	77.249	Propithecus_coquereli
ENSLBEG00000017769	prdm12b	88	84.132	ENSPVAG00000001511	PRDM12	99	76.984	Pteropus_vampyrus
ENSLBEG00000017769	prdm12b	100	87.273	ENSPNYG00000009607	prdm12b	100	87.273	Pundamilia_nyererei
ENSLBEG00000017769	prdm12b	100	77.750	ENSPNYG00000013589	-	100	78.500	Pundamilia_nyererei
ENSLBEG00000017769	prdm12b	100	79.427	ENSPNAG00000013396	PRDM12	100	79.427	Pygocentrus_nattereri
ENSLBEG00000017769	prdm12b	100	82.275	ENSPNAG00000024532	prdm12b	100	83.598	Pygocentrus_nattereri
ENSLBEG00000017769	prdm12b	88	84.132	ENSRNOG00000009218	Prdm12	99	76.984	Rattus_norvegicus
ENSLBEG00000017769	prdm12b	86	84.049	ENSRBIG00000042712	PRDM12	88	83.333	Rhinopithecus_bieti
ENSLBEG00000017769	prdm12b	87	84.242	ENSRROG00000043554	PRDM12	99	83.939	Rhinopithecus_roxellana
ENSLBEG00000017769	prdm12b	100	77.573	ENSSHAG00000015972	PRDM12	99	77.573	Sarcophilus_harrisii
ENSLBEG00000017769	prdm12b	100	85.934	ENSSMAG00000003754	prdm12b	100	85.823	Scophthalmus_maximus
ENSLBEG00000017769	prdm12b	100	81.039	ENSSDUG00000019071	-	100	81.299	Seriola_dumerili
ENSLBEG00000017769	prdm12b	100	88.205	ENSSDUG00000023498	prdm12b	100	88.205	Seriola_dumerili
ENSLBEG00000017769	prdm12b	100	89.406	ENSSLDG00000009557	prdm12b	100	89.406	Seriola_lalandi_dorsalis
ENSLBEG00000017769	prdm12b	100	77.836	ENSSLDG00000013562	-	100	77.836	Seriola_lalandi_dorsalis
ENSLBEG00000017769	prdm12b	100	78.307	ENSSPUG00000013424	PRDM12	99	77.778	Sphenodon_punctatus
ENSLBEG00000017769	prdm12b	100	71.538	ENSSPAG00000022420	-	100	71.795	Stegastes_partitus
ENSLBEG00000017769	prdm12b	100	88.601	ENSSPAG00000018824	prdm12b	100	88.601	Stegastes_partitus
ENSLBEG00000017769	prdm12b	88	84.132	ENSSSCG00000005703	PRDM12	99	76.720	Sus_scrofa
ENSLBEG00000017769	prdm12b	100	77.690	ENSTRUG00000013239	-	100	77.690	Takifugu_rubripes
ENSLBEG00000017769	prdm12b	100	87.632	ENSTRUG00000018659	prdm12b	100	87.368	Takifugu_rubripes
ENSLBEG00000017769	prdm12b	100	74.935	ENSTNIG00000005859	-	99	73.629	Tetraodon_nigroviridis
ENSLBEG00000017769	prdm12b	100	87.368	ENSTNIG00000009020	prdm12b	99	87.105	Tetraodon_nigroviridis
ENSLBEG00000017769	prdm12b	88	84.132	ENSUAMG00000009653	PRDM12	90	83.832	Ursus_americanus
ENSLBEG00000017769	prdm12b	88	84.132	ENSVVUG00000027662	PRDM12	77	83.832	Vulpes_vulpes
ENSLBEG00000017769	prdm12b	100	88.624	ENSXCOG00000002836	prdm12b	99	89.683	Xiphophorus_couchianus
ENSLBEG00000017769	prdm12b	100	89.153	ENSXMAG00000005537	prdm12b	100	90.212	Xiphophorus_maculatus
ENSLBEG00000017769	prdm12b	100	75.430	ENSXMAG00000028012	-	100	74.693	Xiphophorus_maculatus