EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017799 (Gene tree)
Gene ID: -
Gene Symbol: fam83c
Alias: im:7149063
Full Name: family with sequence similarity 83 member C
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 21949 bases
Position: chrFKLU01000472.1:206001-227949
Accession: 109998272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023226	FAM83	PF07894.12	5.4e-112	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024436	-	1755	XM_020653057	ENSLBEP00000023226	584 (aa)	XP_020508713	-

Gene Model

Click here to download ENSLBEG00000017799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017799	fam83c	51	38.158	ENSLBEG00000017964	fam83d	52	38.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017799	fam83c	99	76.167	ENSACIG00000015685	fam83c	99	76.333	Amphilophus_citrinellus
ENSLBEG00000017799	fam83c	99	78.401	ENSAPEG00000023028	fam83c	99	78.401	Amphiprion_percula
ENSLBEG00000017799	fam83c	99	75.738	ENSATEG00000008410	fam83c	97	75.738	Anabas_testudineus
ENSLBEG00000017799	fam83c	55	74.194	ENSAPLG00000007684	FAM83C	63	74.194	Anas_platyrhynchos
ENSLBEG00000017799	fam83c	50	53.378	ENSACAG00000005517	FAM83C	79	53.378	Anolis_carolinensis
ENSLBEG00000017799	fam83c	99	80.169	ENSACLG00000013293	fam83c	99	80.339	Astatotilapia_calliptera
ENSLBEG00000017799	fam83c	99	65.466	ENSAMXG00000018399	fam83c	99	64.975	Astyanax_mexicanus
ENSLBEG00000017799	fam83c	99	76.129	ENSCSEG00000017826	fam83c	99	76.527	Cynoglossus_semilaevis
ENSLBEG00000017799	fam83c	100	70.924	ENSCVAG00000010589	fam83c	100	70.924	Cyprinodon_variegatus
ENSLBEG00000017799	fam83c	99	61.642	ENSDARG00000075296	fam83c	99	61.139	Danio_rerio
ENSLBEG00000017799	fam83c	99	67.434	ENSELUG00000014439	fam83c	99	68.099	Esox_lucius
ENSLBEG00000017799	fam83c	50	49.502	ENSFALG00000012451	FAM83C	74	49.502	Ficedula_albicollis
ENSLBEG00000017799	fam83c	98	69.847	ENSFHEG00000017527	fam83c	98	69.847	Fundulus_heteroclitus
ENSLBEG00000017799	fam83c	52	76.721	ENSGMOG00000003558	fam83c	92	74.608	Gadus_morhua
ENSLBEG00000017799	fam83c	57	74.194	ENSGALG00000031906	FAM83C	54	74.194	Gallus_gallus
ENSLBEG00000017799	fam83c	54	70.093	ENSGACG00000000006	fam83c	90	70.717	Gasterosteus_aculeatus
ENSLBEG00000017799	fam83c	95	37.961	ENSGAGG00000011761	FAM83C	64	51.623	Gopherus_agassizii
ENSLBEG00000017799	fam83c	99	80.000	ENSHBUG00000009655	fam83c	99	80.000	Haplochromis_burtoni
ENSLBEG00000017799	fam83c	99	54.572	ENSHCOG00000014079	fam83c	88	85.000	Hippocampus_comes
ENSLBEG00000017799	fam83c	99	62.791	ENSIPUG00000002046	FAM83C	99	62.791	Ictalurus_punctatus
ENSLBEG00000017799	fam83c	99	73.127	ENSKMAG00000015504	fam83c	99	73.127	Kryptolebias_marmoratus
ENSLBEG00000017799	fam83c	72	62.733	ENSLACG00000005534	FAM83C	67	65.625	Latimeria_chalumnae
ENSLBEG00000017799	fam83c	99	61.338	ENSLOCG00000007724	fam83c	99	61.338	Lepisosteus_oculatus
ENSLBEG00000017799	fam83c	99	77.651	ENSMAMG00000010316	fam83c	99	77.651	Mastacembelus_armatus
ENSLBEG00000017799	fam83c	99	80.339	ENSMZEG00005009063	fam83c	99	80.339	Maylandia_zebra
ENSLBEG00000017799	fam83c	55	77.419	ENSMGAG00000001956	FAM83C	63	77.419	Meleagris_gallopavo
ENSLBEG00000017799	fam83c	71	73.826	ENSMMOG00000016277	fam83c	87	72.907	Mola_mola
ENSLBEG00000017799	fam83c	99	76.098	ENSMALG00000020114	fam83c	99	76.098	Monopterus_albus
ENSLBEG00000017799	fam83c	99	71.429	ENSONIG00000018564	fam83c	99	71.429	Oreochromis_niloticus
ENSLBEG00000017799	fam83c	99	68.627	ENSORLG00000002950	fam83c	99	68.137	Oryzias_latipes
ENSLBEG00000017799	fam83c	99	68.301	ENSORLG00020001822	fam83c	99	67.810	Oryzias_latipes_hni
ENSLBEG00000017799	fam83c	99	69.118	ENSORLG00015019398	fam83c	99	68.627	Oryzias_latipes_hsok
ENSLBEG00000017799	fam83c	99	67.045	ENSOMEG00000003633	fam83c	99	66.071	Oryzias_melastigma
ENSLBEG00000017799	fam83c	99	61.398	ENSPKIG00000023250	fam83c	99	61.398	Paramormyrops_kingsleyae
ENSLBEG00000017799	fam83c	99	78.209	ENSPMGG00000003433	fam83c	99	78.209	Periophthalmus_magnuspinnatus
ENSLBEG00000017799	fam83c	99	73.432	ENSPFOG00000014676	fam83c	99	73.432	Poecilia_formosa
ENSLBEG00000017799	fam83c	99	72.638	ENSPLAG00000023095	fam83c	99	72.638	Poecilia_latipinna
ENSLBEG00000017799	fam83c	99	72.638	ENSPMEG00000012791	fam83c	99	72.638	Poecilia_mexicana
ENSLBEG00000017799	fam83c	98	73.438	ENSPREG00000021668	fam83c	99	73.438	Poecilia_reticulata
ENSLBEG00000017799	fam83c	99	73.898	ENSPNYG00000019386	fam83c	99	73.898	Pundamilia_nyererei
ENSLBEG00000017799	fam83c	99	66.775	ENSPNAG00000011432	fam83c	99	66.451	Pygocentrus_nattereri
ENSLBEG00000017799	fam83c	76	60.832	ENSSFOG00015004158	fam83c	88	60.699	Scleropages_formosus
ENSLBEG00000017799	fam83c	99	77.036	ENSSMAG00000005706	fam83c	99	77.036	Scophthalmus_maximus
ENSLBEG00000017799	fam83c	99	75.897	ENSSDUG00000017583	fam83c	99	75.897	Seriola_dumerili
ENSLBEG00000017799	fam83c	99	76.789	ENSSLDG00000011527	fam83c	99	76.948	Seriola_lalandi_dorsalis
ENSLBEG00000017799	fam83c	50	55.592	ENSSPUG00000012470	FAM83C	50	55.592	Sphenodon_punctatus
ENSLBEG00000017799	fam83c	99	76.490	ENSSPAG00000017752	fam83c	99	77.778	Stegastes_partitus
ENSLBEG00000017799	fam83c	62	81.994	ENSTNIG00000002833	fam83c	99	81.994	Tetraodon_nigroviridis
ENSLBEG00000017799	fam83c	52	56.129	ENSXETG00000019789	fam83c	76	56.711	Xenopus_tropicalis
ENSLBEG00000017799	fam83c	71	68.065	ENSXCOG00000017358	fam83c	89	68.531	Xiphophorus_couchianus
ENSLBEG00000017799	fam83c	99	71.987	ENSXMAG00000023922	fam83c	99	72.638	Xiphophorus_maculatus