EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000017984 (Gene tree)
Gene ID: 109999531
Gene Symbol: EDC3 (1 of many)
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 28451 bases
Position: chrFKLU01000569.1:55904-84354
Accession: 109999531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023427	FDF	PF09532.10	2.2e-06	1	1
ENSLBEP00000023427	LSM14	PF12701.7	6.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024652	EDC3 (1 of many)-201	3554	XM_020654591	ENSLBEP00000023427	475 (aa)	XP_020510247	UPI0009B4BCF1

Gene Model

Click here to download ENSLBEG00000017984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000017984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000017984	EDC3	100	63.544	ENSLBEG00000013435	edc3	99	64.139

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000017984	EDC3	100	58.527	ENSG00000179151	EDC3	100	75.926	Homo_sapiens
ENSLBEG00000017984	EDC3	100	64.959	ENSAPOG00000010791	edc3	100	64.959	Acanthochromis_polyacanthus
ENSLBEG00000017984	EDC3	100	70.303	ENSAPOG00000008655	EDC3	100	70.303	Acanthochromis_polyacanthus
ENSLBEG00000017984	EDC3	100	58.527	ENSAMEG00000008963	EDC3	100	58.527	Ailuropoda_melanoleuca
ENSLBEG00000017984	EDC3	99	73.038	ENSACIG00000005330	EDC3	99	73.038	Amphilophus_citrinellus
ENSLBEG00000017984	EDC3	100	63.934	ENSACIG00000017751	edc3	100	63.934	Amphilophus_citrinellus
ENSLBEG00000017984	EDC3	100	76.987	ENSAOCG00000009103	-	100	76.987	Amphiprion_ocellaris
ENSLBEG00000017984	EDC3	100	64.754	ENSAOCG00000005431	edc3	100	64.754	Amphiprion_ocellaris
ENSLBEG00000017984	EDC3	100	64.754	ENSAPEG00000000968	edc3	100	64.754	Amphiprion_percula
ENSLBEG00000017984	EDC3	100	77.197	ENSAPEG00000007841	EDC3	100	77.197	Amphiprion_percula
ENSLBEG00000017984	EDC3	100	79.498	ENSATEG00000004205	-	100	79.498	Anabas_testudineus
ENSLBEG00000017984	EDC3	100	64.040	ENSATEG00000015505	edc3	100	64.040	Anabas_testudineus
ENSLBEG00000017984	EDC3	75	65.651	ENSAPLG00000008957	EDC3	78	65.651	Anas_platyrhynchos
ENSLBEG00000017984	EDC3	77	53.102	ENSACAG00000000460	-	100	53.102	Anolis_carolinensis
ENSLBEG00000017984	EDC3	100	58.527	ENSANAG00000024078	EDC3	100	58.527	Aotus_nancymaae
ENSLBEG00000017984	EDC3	100	64.476	ENSACLG00000007232	edc3	100	64.476	Astatotilapia_calliptera
ENSLBEG00000017984	EDC3	100	73.849	ENSACLG00000018776	-	100	73.849	Astatotilapia_calliptera
ENSLBEG00000017984	EDC3	100	62.062	ENSAMXG00000001589	edc3	100	62.062	Astyanax_mexicanus
ENSLBEG00000017984	EDC3	100	59.109	ENSBTAG00000007308	EDC3	100	59.109	Bos_taurus
ENSLBEG00000017984	EDC3	100	58.527	ENSCJAG00000017681	EDC3	100	58.527	Callithrix_jacchus
ENSLBEG00000017984	EDC3	100	57.364	ENSCAFG00000017935	EDC3	100	57.946	Canis_familiaris
ENSLBEG00000017984	EDC3	100	57.364	ENSCAFG00020003909	EDC3	100	57.946	Canis_lupus_dingo
ENSLBEG00000017984	EDC3	100	59.302	ENSCHIG00000023658	EDC3	100	59.302	Capra_hircus
ENSLBEG00000017984	EDC3	100	58.721	ENSTSYG00000004822	EDC3	100	58.721	Carlito_syrichta
ENSLBEG00000017984	EDC3	100	59.029	ENSCPOG00000015595	EDC3	100	59.029	Cavia_porcellus
ENSLBEG00000017984	EDC3	100	58.333	ENSCCAG00000021663	EDC3	100	58.333	Cebus_capucinus
ENSLBEG00000017984	EDC3	100	57.965	ENSCATG00000037511	EDC3	100	57.965	Cercocebus_atys
ENSLBEG00000017984	EDC3	100	58.607	ENSCLAG00000005700	EDC3	100	58.607	Chinchilla_lanigera
ENSLBEG00000017984	EDC3	100	57.965	ENSCSAG00000014239	EDC3	100	57.965	Chlorocebus_sabaeus
ENSLBEG00000017984	EDC3	100	58.414	ENSCPBG00000024239	EDC3	100	58.414	Chrysemys_picta_bellii
ENSLBEG00000017984	EDC3	100	36.417	ENSCING00000022142	-	99	36.417	Ciona_intestinalis
ENSLBEG00000017984	EDC3	100	57.965	ENSCANG00000028699	EDC3	100	57.965	Colobus_angolensis_palliatus
ENSLBEG00000017984	EDC3	100	57.390	ENSCGRG00001013874	Edc3	100	57.390	Cricetulus_griseus_chok1gshd
ENSLBEG00000017984	EDC3	100	57.390	ENSCGRG00000011885	Edc3	100	57.390	Cricetulus_griseus_crigri
ENSLBEG00000017984	EDC3	99	65.567	ENSCSEG00000012996	edc3	99	65.567	Cynoglossus_semilaevis
ENSLBEG00000017984	EDC3	100	65.010	ENSCVAG00000008023	edc3	100	65.010	Cyprinodon_variegatus
ENSLBEG00000017984	EDC3	99	60.980	ENSDARG00000051931	edc3	99	60.819	Danio_rerio
ENSLBEG00000017984	EDC3	100	52.751	ENSDNOG00000030661	EDC3	100	52.751	Dasypus_novemcinctus
ENSLBEG00000017984	EDC3	69	75.926	ENSETEG00000002398	-	64	75.926	Echinops_telfairi
ENSLBEG00000017984	EDC3	100	58.527	ENSEASG00005005071	EDC3	100	58.527	Equus_asinus_asinus
ENSLBEG00000017984	EDC3	100	58.527	ENSECAG00000017994	EDC3	100	58.527	Equus_caballus
ENSLBEG00000017984	EDC3	100	63.525	ENSELUG00000005794	edc3	100	63.525	Esox_lucius
ENSLBEG00000017984	EDC3	100	68.058	ENSELUG00000007607	EDC3	100	68.058	Esox_lucius
ENSLBEG00000017984	EDC3	100	57.965	ENSFCAG00000002014	EDC3	100	57.965	Felis_catus
ENSLBEG00000017984	EDC3	98	55.754	ENSFALG00000004543	EDC3	96	55.754	Ficedula_albicollis
ENSLBEG00000017984	EDC3	100	58.641	ENSFDAG00000012582	EDC3	100	58.641	Fukomys_damarensis
ENSLBEG00000017984	EDC3	100	64.898	ENSFHEG00000009375	edc3	100	64.898	Fundulus_heteroclitus
ENSLBEG00000017984	EDC3	100	66.255	ENSGMOG00000002715	edc3	100	66.255	Gadus_morhua
ENSLBEG00000017984	EDC3	100	57.700	ENSGALG00000040181	EDC3	100	57.700	Gallus_gallus
ENSLBEG00000017984	EDC3	100	63.878	ENSGAFG00000014433	edc3	100	64.008	Gambusia_affinis
ENSLBEG00000017984	EDC3	100	64.213	ENSGACG00000009783	edc3	100	64.213	Gasterosteus_aculeatus
ENSLBEG00000017984	EDC3	99	66.988	ENSGACG00000014671	EDC3	99	67.906	Gasterosteus_aculeatus
ENSLBEG00000017984	EDC3	100	58.027	ENSGAGG00000023477	EDC3	99	58.140	Gopherus_agassizii
ENSLBEG00000017984	EDC3	100	58.527	ENSGGOG00000003552	EDC3	100	58.527	Gorilla_gorilla
ENSLBEG00000017984	EDC3	99	74.214	ENSHBUG00000020817	EDC3	99	74.214	Haplochromis_burtoni
ENSLBEG00000017984	EDC3	100	64.476	ENSHBUG00000003635	edc3	100	64.476	Haplochromis_burtoni
ENSLBEG00000017984	EDC3	100	63.374	ENSHCOG00000016834	edc3	100	63.374	Hippocampus_comes
ENSLBEG00000017984	EDC3	99	62.425	ENSIPUG00000005695	edc3	100	62.425	Ictalurus_punctatus
ENSLBEG00000017984	EDC3	100	58.349	ENSSTOG00000013936	EDC3	100	58.349	Ictidomys_tridecemlineatus
ENSLBEG00000017984	EDC3	100	57.864	ENSJJAG00000008074	Edc3	100	57.864	Jaculus_jaculus
ENSLBEG00000017984	EDC3	100	74.268	ENSKMAG00000001987	EDC3	100	74.268	Kryptolebias_marmoratus
ENSLBEG00000017984	EDC3	100	64.082	ENSKMAG00000001243	edc3	100	64.082	Kryptolebias_marmoratus
ENSLBEG00000017984	EDC3	99	61.079	ENSLACG00000014149	EDC3	99	61.079	Latimeria_chalumnae
ENSLBEG00000017984	EDC3	99	58.717	ENSLOCG00000014625	edc3	99	58.730	Lepisosteus_oculatus
ENSLBEG00000017984	EDC3	100	58.157	ENSLAFG00000002992	EDC3	100	58.157	Loxodonta_africana
ENSLBEG00000017984	EDC3	100	57.774	ENSMFAG00000043074	EDC3	100	57.774	Macaca_fascicularis
ENSLBEG00000017984	EDC3	100	57.774	ENSMMUG00000011071	EDC3	100	57.774	Macaca_mulatta
ENSLBEG00000017984	EDC3	100	57.774	ENSMNEG00000035316	EDC3	100	57.774	Macaca_nemestrina
ENSLBEG00000017984	EDC3	100	57.965	ENSMLEG00000030372	EDC3	100	57.965	Mandrillus_leucophaeus
ENSLBEG00000017984	EDC3	100	64.139	ENSMAMG00000000505	edc3	100	64.139	Mastacembelus_armatus
ENSLBEG00000017984	EDC3	99	79.832	ENSMAMG00000005423	-	99	79.832	Mastacembelus_armatus
ENSLBEG00000017984	EDC3	100	73.859	ENSMZEG00005005654	EDC3	100	73.859	Maylandia_zebra
ENSLBEG00000017984	EDC3	100	64.271	ENSMZEG00005004892	edc3	100	64.271	Maylandia_zebra
ENSLBEG00000017984	EDC3	100	57.895	ENSMGAG00000002617	EDC3	100	57.895	Meleagris_gallopavo
ENSLBEG00000017984	EDC3	100	58.140	ENSMICG00000043190	EDC3	100	58.140	Microcebus_murinus
ENSLBEG00000017984	EDC3	100	57.115	ENSMOCG00000016205	Edc3	100	57.115	Microtus_ochrogaster
ENSLBEG00000017984	EDC3	99	64.694	ENSMMOG00000012278	edc3	99	64.694	Mola_mola
ENSLBEG00000017984	EDC3	99	57.977	ENSMODG00000009442	EDC3	99	57.977	Monodelphis_domestica
ENSLBEG00000017984	EDC3	100	65.644	ENSMALG00000008658	edc3	100	65.377	Monopterus_albus
ENSLBEG00000017984	EDC3	100	56.893	MGP_CAROLIEiJ_G0032280	Edc3	100	72.308	Mus_caroli
ENSLBEG00000017984	EDC3	100	57.087	ENSMUSG00000038957	Edc3	100	72.308	Mus_musculus
ENSLBEG00000017984	EDC3	100	57.087	MGP_PahariEiJ_G0015146	Edc3	100	72.308	Mus_pahari
ENSLBEG00000017984	EDC3	100	57.087	MGP_SPRETEiJ_G0033420	Edc3	100	72.308	Mus_spretus
ENSLBEG00000017984	EDC3	100	58.349	ENSMPUG00000017293	EDC3	100	58.349	Mustela_putorius_furo
ENSLBEG00000017984	EDC3	100	58.880	ENSMLUG00000016382	EDC3	100	58.880	Myotis_lucifugus
ENSLBEG00000017984	EDC3	100	57.558	ENSNGAG00000010923	Edc3	100	57.558	Nannospalax_galili
ENSLBEG00000017984	EDC3	99	73.913	ENSNBRG00000007881	EDC3	99	73.913	Neolamprologus_brichardi
ENSLBEG00000017984	EDC3	100	64.271	ENSNBRG00000002434	edc3	100	64.271	Neolamprologus_brichardi
ENSLBEG00000017984	EDC3	100	50.775	ENSNLEG00000014577	EDC3	100	50.775	Nomascus_leucogenys
ENSLBEG00000017984	EDC3	99	58.090	ENSMEUG00000009077	EDC3	99	58.090	Notamacropus_eugenii
ENSLBEG00000017984	EDC3	85	75.926	ENSOPRG00000009540	-	79	75.926	Ochotona_princeps
ENSLBEG00000017984	EDC3	100	64.476	ENSONIG00000008434	edc3	100	64.476	Oreochromis_niloticus
ENSLBEG00000017984	EDC3	100	68.992	ENSONIG00000002932	-	100	68.992	Oreochromis_niloticus
ENSLBEG00000017984	EDC3	77	53.301	ENSOCUG00000017740	EDC3	86	53.301	Oryctolagus_cuniculus
ENSLBEG00000017984	EDC3	100	76.151	ENSORLG00000014399	-	98	76.151	Oryzias_latipes
ENSLBEG00000017984	EDC3	100	63.895	ENSORLG00000004883	edc3	100	63.895	Oryzias_latipes
ENSLBEG00000017984	EDC3	100	75.941	ENSORLG00020019446	-	100	75.941	Oryzias_latipes_hni
ENSLBEG00000017984	EDC3	100	63.895	ENSORLG00020012262	edc3	100	63.895	Oryzias_latipes_hni
ENSLBEG00000017984	EDC3	100	64.097	ENSORLG00015005634	edc3	100	64.097	Oryzias_latipes_hsok
ENSLBEG00000017984	EDC3	100	75.732	ENSORLG00015017635	-	96	75.732	Oryzias_latipes_hsok
ENSLBEG00000017984	EDC3	100	76.360	ENSOMEG00000017354	EDC3	100	76.360	Oryzias_melastigma
ENSLBEG00000017984	EDC3	100	65.083	ENSOMEG00000014026	edc3	100	65.083	Oryzias_melastigma
ENSLBEG00000017984	EDC3	100	57.282	ENSOGAG00000014441	EDC3	100	57.640	Otolemur_garnettii
ENSLBEG00000017984	EDC3	100	58.607	ENSOARG00000003476	EDC3	100	59.381	Ovis_aries
ENSLBEG00000017984	EDC3	100	58.527	ENSPPAG00000040143	EDC3	100	58.527	Pan_paniscus
ENSLBEG00000017984	EDC3	100	57.965	ENSPPRG00000006257	EDC3	100	57.965	Panthera_pardus
ENSLBEG00000017984	EDC3	100	57.965	ENSPTIG00000017424	EDC3	100	57.965	Panthera_tigris_altaica
ENSLBEG00000017984	EDC3	100	58.527	ENSPTRG00000007279	EDC3	100	58.527	Pan_troglodytes
ENSLBEG00000017984	EDC3	100	57.965	ENSPANG00000015997	EDC3	100	57.965	Papio_anubis
ENSLBEG00000017984	EDC3	100	62.062	ENSPKIG00000004416	edc3	100	62.451	Paramormyrops_kingsleyae
ENSLBEG00000017984	EDC3	100	63.095	ENSPKIG00000019810	EDC3	100	63.095	Paramormyrops_kingsleyae
ENSLBEG00000017984	EDC3	99	53.257	ENSPSIG00000008474	EDC3	99	54.215	Pelodiscus_sinensis
ENSLBEG00000017984	EDC3	100	63.244	ENSPMGG00000007223	edc3	100	63.244	Periophthalmus_magnuspinnatus
ENSLBEG00000017984	EDC3	100	58.027	ENSPEMG00000015260	Edc3	100	58.027	Peromyscus_maniculatus_bairdii
ENSLBEG00000017984	EDC3	99	57.700	ENSPCIG00000006276	EDC3	70	57.700	Phascolarctos_cinereus
ENSLBEG00000017984	EDC3	100	64.286	ENSPFOG00000012204	edc3	100	64.286	Poecilia_formosa
ENSLBEG00000017984	EDC3	100	64.286	ENSPLAG00000014420	edc3	100	64.286	Poecilia_latipinna
ENSLBEG00000017984	EDC3	100	64.286	ENSPMEG00000023289	edc3	100	64.286	Poecilia_mexicana
ENSLBEG00000017984	EDC3	100	64.082	ENSPREG00000016022	edc3	100	64.082	Poecilia_reticulata
ENSLBEG00000017984	EDC3	100	57.558	ENSPPYG00000006642	EDC3	100	57.558	Pongo_abelii
ENSLBEG00000017984	EDC3	87	75.926	ENSPCAG00000002802	EDC3	80	75.926	Procavia_capensis
ENSLBEG00000017984	EDC3	100	57.965	ENSPCOG00000013364	EDC3	100	57.965	Propithecus_coquereli
ENSLBEG00000017984	EDC3	100	58.527	ENSPVAG00000014733	EDC3	100	58.721	Pteropus_vampyrus
ENSLBEG00000017984	EDC3	99	74.214	ENSPNYG00000009669	EDC3	99	74.214	Pundamilia_nyererei
ENSLBEG00000017984	EDC3	100	64.476	ENSPNYG00000021797	edc3	100	64.476	Pundamilia_nyererei
ENSLBEG00000017984	EDC3	100	61.479	ENSPNAG00000019657	edc3	100	61.479	Pygocentrus_nattereri
ENSLBEG00000017984	EDC3	99	57.227	ENSRNOG00000019579	Edc3	99	57.812	Rattus_norvegicus
ENSLBEG00000017984	EDC3	100	57.965	ENSRBIG00000019488	EDC3	100	57.965	Rhinopithecus_bieti
ENSLBEG00000017984	EDC3	100	57.965	ENSRROG00000034959	EDC3	100	57.965	Rhinopithecus_roxellana
ENSLBEG00000017984	EDC3	100	58.333	ENSSBOG00000004896	EDC3	100	58.333	Saimiri_boliviensis_boliviensis
ENSLBEG00000017984	EDC3	96	56.478	ENSSHAG00000015075	EDC3	95	56.478	Sarcophilus_harrisii
ENSLBEG00000017984	EDC3	100	63.889	ENSSFOG00015016939	edc3	100	63.938	Scleropages_formosus
ENSLBEG00000017984	EDC3	100	66.526	ENSSFOG00015002439	edc3	100	66.105	Scleropages_formosus
ENSLBEG00000017984	EDC3	99	77.521	ENSSMAG00000010176	-	99	77.521	Scophthalmus_maximus
ENSLBEG00000017984	EDC3	100	64.562	ENSSMAG00000010695	edc3	100	64.562	Scophthalmus_maximus
ENSLBEG00000017984	EDC3	100	81.590	ENSSDUG00000007671	EDC3	100	81.590	Seriola_dumerili
ENSLBEG00000017984	EDC3	100	63.951	ENSSDUG00000021844	edc3	100	64.562	Seriola_dumerili
ENSLBEG00000017984	EDC3	100	63.951	ENSSLDG00000022046	edc3	100	64.562	Seriola_lalandi_dorsalis
ENSLBEG00000017984	EDC3	66	72.581	ENSSARG00000003907	EDC3	62	72.581	Sorex_araneus
ENSLBEG00000017984	EDC3	100	57.471	ENSSPUG00000008232	EDC3	100	57.864	Sphenodon_punctatus
ENSLBEG00000017984	EDC3	100	64.754	ENSSPAG00000010009	edc3	100	64.754	Stegastes_partitus
ENSLBEG00000017984	EDC3	100	80.126	ENSSPAG00000020327	EDC3	100	80.126	Stegastes_partitus
ENSLBEG00000017984	EDC3	100	61.191	ENSSSCG00000001903	EDC3	100	61.191	Sus_scrofa
ENSLBEG00000017984	EDC3	100	57.310	ENSTGUG00000004007	EDC3	99	57.422	Taeniopygia_guttata
ENSLBEG00000017984	EDC3	100	65.574	ENSTRUG00000017078	edc3	100	65.574	Takifugu_rubripes
ENSLBEG00000017984	EDC3	100	64.503	ENSTNIG00000016047	edc3	100	64.503	Tetraodon_nigroviridis
ENSLBEG00000017984	EDC3	100	58.755	ENSTTRG00000007990	EDC3	100	58.755	Tursiops_truncatus
ENSLBEG00000017984	EDC3	100	58.527	ENSUAMG00000026710	-	100	58.527	Ursus_americanus
ENSLBEG00000017984	EDC3	100	58.527	ENSUMAG00000005006	EDC3	96	58.527	Ursus_maritimus
ENSLBEG00000017984	EDC3	85	66.667	ENSVPAG00000003499	-	79	66.667	Vicugna_pacos
ENSLBEG00000017984	EDC3	100	58.140	ENSVVUG00000018601	EDC3	100	58.140	Vulpes_vulpes
ENSLBEG00000017984	EDC3	73	66.761	ENSXETG00000010622	edc3	99	66.761	Xenopus_tropicalis
ENSLBEG00000017984	EDC3	100	64.286	ENSXMAG00000007377	edc3	100	64.286	Xiphophorus_maculatus