EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018100 (Gene tree)
Gene ID: -
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3199 bases
Position: chrFKLU01000153.1:781026-784224
Accession: ZDB-GENE-060825-196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023590	RRM_1	PF00076.22	8.7e-21	1	2
ENSLBEP00000023590	RRM_1	PF00076.22	8.7e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024825	-	897	-	ENSLBEP00000023590	298 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000018100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018100	grsf1	93	40.193	ENSLBEG00000027811	hnrnph1	80	40.193
ENSLBEG00000018100	grsf1	77	40.000	ENSLBEG00000001661	hnrnph3	82	40.000
ENSLBEG00000018100	grsf1	91	41.964	ENSLBEG00000008709	hnrnph3	75	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018100	grsf1	97	54.662	ENSAPOG00000012487	grsf1	74	56.187	Acanthochromis_polyacanthus
ENSLBEG00000018100	grsf1	98	55.987	ENSACIG00000005871	grsf1	78	55.987	Amphilophus_citrinellus
ENSLBEG00000018100	grsf1	97	54.723	ENSAOCG00000017462	-	73	56.271	Amphiprion_ocellaris
ENSLBEG00000018100	grsf1	97	54.341	ENSAPEG00000007240	-	73	55.853	Amphiprion_percula
ENSLBEG00000018100	grsf1	98	56.311	ENSATEG00000007185	grsf1	77	56.311	Anabas_testudineus
ENSLBEG00000018100	grsf1	95	57.705	ENSACLG00000003685	-	76	58.000	Astatotilapia_calliptera
ENSLBEG00000018100	grsf1	93	45.517	ENSAMXG00000012270	grsf1	98	44.257	Astyanax_mexicanus
ENSLBEG00000018100	grsf1	93	52.862	ENSCSEG00000019209	-	90	52.862	Cynoglossus_semilaevis
ENSLBEG00000018100	grsf1	98	55.519	ENSCVAG00000004476	grsf1	78	55.519	Cyprinodon_variegatus
ENSLBEG00000018100	grsf1	97	41.234	ENSDARG00000053021	grsf1	72	41.234	Danio_rerio
ENSLBEG00000018100	grsf1	94	46.780	ENSFHEG00000013358	-	82	46.780	Fundulus_heteroclitus
ENSLBEG00000018100	grsf1	97	66.667	ENSGMOG00000014047	grsf1	73	66.667	Gadus_morhua
ENSLBEG00000018100	grsf1	98	50.309	ENSGAFG00000004496	grsf1	78	50.309	Gambusia_affinis
ENSLBEG00000018100	grsf1	92	52.396	ENSGACG00000014447	grsf1	95	52.396	Gasterosteus_aculeatus
ENSLBEG00000018100	grsf1	95	58.416	ENSHBUG00000006284	grsf1	76	58.389	Haplochromis_burtoni
ENSLBEG00000018100	grsf1	98	48.734	ENSHCOG00000007715	-	79	48.734	Hippocampus_comes
ENSLBEG00000018100	grsf1	94	49.662	ENSIPUG00000010533	grsf1	76	49.662	Ictalurus_punctatus
ENSLBEG00000018100	grsf1	98	51.582	ENSKMAG00000004528	grsf1	74	51.582	Kryptolebias_marmoratus
ENSLBEG00000018100	grsf1	94	57.895	ENSMAMG00000002627	grsf1	78	57.895	Mastacembelus_armatus
ENSLBEG00000018100	grsf1	93	58.000	ENSMZEG00005020633	-	76	58.000	Maylandia_zebra
ENSLBEG00000018100	grsf1	96	59.868	ENSMMOG00000014231	grsf1	84	57.827	Mola_mola
ENSLBEG00000018100	grsf1	94	56.494	ENSMALG00000000251	grsf1	79	56.494	Monopterus_albus
ENSLBEG00000018100	grsf1	95	58.033	ENSNBRG00000017774	grsf1	74	58.033	Neolamprologus_brichardi
ENSLBEG00000018100	grsf1	98	57.460	ENSONIG00000014119	grsf1	98	52.326	Oreochromis_niloticus
ENSLBEG00000018100	grsf1	96	54.984	ENSORLG00000030211	grsf1	78	55.082	Oryzias_latipes
ENSLBEG00000018100	grsf1	96	54.754	ENSORLG00020014383	grsf1	79	54.754	Oryzias_latipes_hni
ENSLBEG00000018100	grsf1	96	54.019	ENSORLG00015006520	grsf1	78	54.754	Oryzias_latipes_hsok
ENSLBEG00000018100	grsf1	93	58.844	ENSOMEG00000009181	grsf1	79	58.844	Oryzias_melastigma
ENSLBEG00000018100	grsf1	93	47.157	ENSPKIG00000019432	grsf1	72	47.333	Paramormyrops_kingsleyae
ENSLBEG00000018100	grsf1	98	55.763	ENSPMGG00000013654	grsf1	87	55.140	Periophthalmus_magnuspinnatus
ENSLBEG00000018100	grsf1	98	50.464	ENSPFOG00000006122	grsf1	78	50.464	Poecilia_formosa
ENSLBEG00000018100	grsf1	98	51.592	ENSPLAG00000020977	grsf1	78	51.592	Poecilia_latipinna
ENSLBEG00000018100	grsf1	98	50.774	ENSPMEG00000012485	grsf1	78	50.774	Poecilia_mexicana
ENSLBEG00000018100	grsf1	98	51.090	ENSPREG00000013383	grsf1	78	51.090	Poecilia_reticulata
ENSLBEG00000018100	grsf1	93	59.184	ENSPNYG00000005379	grsf1	76	59.184	Pundamilia_nyererei
ENSLBEG00000018100	grsf1	93	52.069	ENSPNAG00000014912	grsf1	72	52.069	Pygocentrus_nattereri
ENSLBEG00000018100	grsf1	99	41.892	ENSSFOG00015014620	grsf1	79	41.695	Scleropages_formosus
ENSLBEG00000018100	grsf1	94	51.495	ENSSMAG00000014181	grsf1	67	51.475	Scophthalmus_maximus
ENSLBEG00000018100	grsf1	95	61.564	ENSSDUG00000009397	-	91	61.564	Seriola_dumerili
ENSLBEG00000018100	grsf1	94	59.933	ENSSLDG00000025494	grsf1	91	56.442	Seriola_lalandi_dorsalis
ENSLBEG00000018100	grsf1	96	53.465	ENSSPAG00000023296	grsf1	75	53.465	Stegastes_partitus
ENSLBEG00000018100	grsf1	94	53.691	ENSTRUG00000015354	grsf1	76	53.356	Takifugu_rubripes
ENSLBEG00000018100	grsf1	91	50.694	ENSTNIG00000015350	-	98	46.688	Tetraodon_nigroviridis
ENSLBEG00000018100	grsf1	98	53.355	ENSXMAG00000029710	grsf1	78	53.355	Xiphophorus_maculatus