EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018112 (Gene tree)
Gene ID: 109980522
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 11098 bases
Position: chrFKLU01000022.1:1434297-1445394
Accession: 109980522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023659	ResIII	PF04851.15	1.7e-10	1	1
ENSLBEP00000023659	DEAD	PF00270.29	5.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024900	-	6189	XM_020628889	ENSLBEP00000023659	1034 (aa)	XP_020484545	UPI0009B378FE

Gene Model

Click here to download ENSLBEG00000018112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018112	smarca5	94	100.000	ENSLBEG00000013295	SMARCA1	100	100.000
ENSLBEG00000018112	smarca5	52	42.518	ENSLBEG00000023845	chd1l	62	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018112	smarca5	95	82.626	ENSG00000102038	SMARCA1	94	81.637	Homo_sapiens
ENSLBEG00000018112	smarca5	100	96.718	ENSAPOG00000016035	smarca5	100	96.718	Acanthochromis_polyacanthus
ENSLBEG00000018112	smarca5	95	81.537	ENSAMEG00000015218	SMARCA1	94	81.537	Ailuropoda_melanoleuca
ENSLBEG00000018112	smarca5	87	96.670	ENSACIG00000016982	smarca5	100	96.670	Amphilophus_citrinellus
ENSLBEG00000018112	smarca5	100	96.718	ENSAOCG00000015578	smarca5	100	96.718	Amphiprion_ocellaris
ENSLBEG00000018112	smarca5	100	96.718	ENSAPEG00000011117	smarca5	99	98.345	Amphiprion_percula
ENSLBEG00000018112	smarca5	100	96.232	ENSATEG00000012894	smarca5	100	96.232	Anabas_testudineus
ENSLBEG00000018112	smarca5	95	83.605	ENSAPLG00000013149	SMARCA1	99	83.605	Anas_platyrhynchos
ENSLBEG00000018112	smarca5	98	82.059	ENSACAG00000011376	SMARCA1	97	82.283	Anolis_carolinensis
ENSLBEG00000018112	smarca5	95	77.980	ENSANAG00000023098	SMARCA1	93	77.980	Aotus_nancymaae
ENSLBEG00000018112	smarca5	100	95.463	ENSACLG00000025356	smarca5	100	95.463	Astatotilapia_calliptera
ENSLBEG00000018112	smarca5	90	83.888	ENSAMXG00000011227	smarca1	99	84.922	Astyanax_mexicanus
ENSLBEG00000018112	smarca5	99	91.942	ENSAMXG00000005709	smarca5	100	91.040	Astyanax_mexicanus
ENSLBEG00000018112	smarca5	95	82.622	ENSBTAG00000002292	SMARCA1	92	82.555	Bos_taurus
ENSLBEG00000018112	smarca5	96	62.846	WBGene00002169	isw-1	99	62.264	Caenorhabditis_elegans
ENSLBEG00000018112	smarca5	95	82.626	ENSCJAG00000002868	SMARCA1	94	81.637	Callithrix_jacchus
ENSLBEG00000018112	smarca5	95	73.684	ENSCAFG00000018673	SMARCA1	99	74.824	Canis_familiaris
ENSLBEG00000018112	smarca5	95	82.727	ENSCAFG00020001751	SMARCA1	93	82.727	Canis_lupus_dingo
ENSLBEG00000018112	smarca5	95	82.323	ENSCHIG00000009837	SMARCA1	93	82.323	Capra_hircus
ENSLBEG00000018112	smarca5	98	79.633	ENSTSYG00000004240	SMARCA1	95	83.351	Carlito_syrichta
ENSLBEG00000018112	smarca5	95	81.526	ENSCPOG00000013601	SMARCA1	94	81.526	Cavia_porcellus
ENSLBEG00000018112	smarca5	95	80.000	ENSCCAG00000030817	SMARCA1	93	80.000	Cebus_capucinus
ENSLBEG00000018112	smarca5	93	83.747	ENSCATG00000015921	SMARCA1	94	81.637	Cercocebus_atys
ENSLBEG00000018112	smarca5	95	82.121	ENSCLAG00000002171	SMARCA1	93	82.121	Chinchilla_lanigera
ENSLBEG00000018112	smarca5	95	82.626	ENSCSAG00000008460	SMARCA1	93	82.626	Chlorocebus_sabaeus
ENSLBEG00000018112	smarca5	95	83.519	ENSCPBG00000001146	SMARCA1	93	83.519	Chrysemys_picta_bellii
ENSLBEG00000018112	smarca5	97	73.591	ENSCING00000004110	swi/snf	99	73.591	Ciona_intestinalis
ENSLBEG00000018112	smarca5	98	73.307	ENSCSAVG00000004620	-	99	76.398	Ciona_savignyi
ENSLBEG00000018112	smarca5	95	82.727	ENSCANG00000007183	SMARCA1	94	81.737	Colobus_angolensis_palliatus
ENSLBEG00000018112	smarca5	95	81.818	ENSCGRG00001010776	Smarca1	93	81.818	Cricetulus_griseus_chok1gshd
ENSLBEG00000018112	smarca5	93	82.286	ENSCGRG00000015301	Smarca1	95	82.322	Cricetulus_griseus_crigri
ENSLBEG00000018112	smarca5	100	96.422	ENSCSEG00000000328	smarca5	100	96.422	Cynoglossus_semilaevis
ENSLBEG00000018112	smarca5	100	95.556	ENSCVAG00000008668	smarca5	99	97.166	Cyprinodon_variegatus
ENSLBEG00000018112	smarca5	94	81.982	ENSDARG00000012776	smarca1	96	81.982	Danio_rerio
ENSLBEG00000018112	smarca5	100	91.040	ENSDARG00000052348	smarca5	100	90.637	Danio_rerio
ENSLBEG00000018112	smarca5	93	83.230	ENSDNOG00000004315	SMARCA1	92	83.281	Dasypus_novemcinctus
ENSLBEG00000018112	smarca5	97	81.529	ENSDORG00000009270	Smarca1	91	84.017	Dipodomys_ordii
ENSLBEG00000018112	smarca5	95	74.798	FBgn0011604	Iswi	99	72.683	Drosophila_melanogaster
ENSLBEG00000018112	smarca5	78	80.000	ENSETEG00000017426	SMARCA1	83	80.000	Echinops_telfairi
ENSLBEG00000018112	smarca5	97	80.437	ENSEBUG00000001239	smarca5	99	80.536	Eptatretus_burgeri
ENSLBEG00000018112	smarca5	95	78.745	ENSEASG00005008218	SMARCA1	99	79.150	Equus_asinus_asinus
ENSLBEG00000018112	smarca5	95	82.626	ENSECAG00000012106	SMARCA1	93	82.626	Equus_caballus
ENSLBEG00000018112	smarca5	77	83.775	ENSEEUG00000014927	SMARCA1	80	83.775	Erinaceus_europaeus
ENSLBEG00000018112	smarca5	94	83.657	ENSELUG00000010515	smarca1	96	83.657	Esox_lucius
ENSLBEG00000018112	smarca5	95	82.626	ENSFCAG00000018496	SMARCA1	94	82.626	Felis_catus
ENSLBEG00000018112	smarca5	88	84.683	ENSFALG00000000209	SMARCA1	98	84.683	Ficedula_albicollis
ENSLBEG00000018112	smarca5	93	82.311	ENSFDAG00000009818	SMARCA1	94	82.347	Fukomys_damarensis
ENSLBEG00000018112	smarca5	100	94.646	ENSFHEG00000007687	smarca5	100	94.551	Fundulus_heteroclitus
ENSLBEG00000018112	smarca5	98	81.683	ENSGALG00000008431	SMARCA1	98	82.477	Gallus_gallus
ENSLBEG00000018112	smarca5	100	95.845	ENSGAFG00000017731	smarca5	100	95.845	Gambusia_affinis
ENSLBEG00000018112	smarca5	94	83.951	ENSGAGG00000023575	SMARCA1	99	83.951	Gopherus_agassizii
ENSLBEG00000018112	smarca5	70	96.000	ENSGGOG00000012841	-	93	78.499	Gorilla_gorilla
ENSLBEG00000018112	smarca5	95	81.414	ENSHGLG00000003080	SMARCA1	93	81.414	Heterocephalus_glaber_female
ENSLBEG00000018112	smarca5	95	80.924	ENSHGLG00100001102	SMARCA1	99	80.924	Heterocephalus_glaber_male
ENSLBEG00000018112	smarca5	100	96.525	ENSHCOG00000005458	smarca5	100	96.525	Hippocampus_comes
ENSLBEG00000018112	smarca5	95	83.096	ENSIPUG00000016905	Smarca1	99	83.096	Ictalurus_punctatus
ENSLBEG00000018112	smarca5	100	90.839	ENSIPUG00000005229	SMARCA5	99	93.114	Ictalurus_punctatus
ENSLBEG00000018112	smarca5	95	82.424	ENSSTOG00000014524	SMARCA1	97	81.400	Ictidomys_tridecemlineatus
ENSLBEG00000018112	smarca5	95	81.307	ENSJJAG00000002593	Smarca1	94	81.307	Jaculus_jaculus
ENSLBEG00000018112	smarca5	100	95.556	ENSKMAG00000003777	smarca5	100	95.845	Kryptolebias_marmoratus
ENSLBEG00000018112	smarca5	95	84.232	ENSLACG00000016697	SMARCA1	97	84.232	Latimeria_chalumnae
ENSLBEG00000018112	smarca5	95	85.102	ENSLOCG00000014591	smarca1	95	85.102	Lepisosteus_oculatus
ENSLBEG00000018112	smarca5	95	81.426	ENSLAFG00000000896	SMARCA1	99	81.426	Loxodonta_africana
ENSLBEG00000018112	smarca5	95	82.626	ENSMFAG00000002117	SMARCA1	95	83.631	Macaca_fascicularis
ENSLBEG00000018112	smarca5	93	83.747	ENSMMUG00000008818	SMARCA1	97	84.239	Macaca_mulatta
ENSLBEG00000018112	smarca5	93	83.747	ENSMNEG00000041768	SMARCA1	95	83.631	Macaca_nemestrina
ENSLBEG00000018112	smarca5	95	82.626	ENSMLEG00000043198	SMARCA1	94	81.637	Mandrillus_leucophaeus
ENSLBEG00000018112	smarca5	100	95.573	ENSMAMG00000014294	smarca5	100	95.669	Mastacembelus_armatus
ENSLBEG00000018112	smarca5	100	95.463	ENSMZEG00005009369	smarca5	100	95.463	Maylandia_zebra
ENSLBEG00000018112	smarca5	95	82.318	ENSMGAG00000007042	SMARCA1	99	82.318	Meleagris_gallopavo
ENSLBEG00000018112	smarca5	93	82.183	ENSMAUG00000008133	Smarca1	91	82.218	Mesocricetus_auratus
ENSLBEG00000018112	smarca5	95	82.929	ENSMICG00000015768	SMARCA1	94	82.929	Microcebus_murinus
ENSLBEG00000018112	smarca5	95	81.307	ENSMOCG00000009464	Smarca1	94	81.307	Microtus_ochrogaster
ENSLBEG00000018112	smarca5	96	95.368	ENSMMOG00000005547	smarca5	100	95.368	Mola_mola
ENSLBEG00000018112	smarca5	99	81.031	ENSMODG00000013187	-	99	80.837	Monodelphis_domestica
ENSLBEG00000018112	smarca5	100	95.261	ENSMALG00000002081	smarca5	100	95.745	Monopterus_albus
ENSLBEG00000018112	smarca5	95	81.307	MGP_CAROLIEiJ_G0033034	Smarca1	94	81.307	Mus_caroli
ENSLBEG00000018112	smarca5	95	81.407	ENSMUSG00000031099	Smarca1	94	81.407	Mus_musculus
ENSLBEG00000018112	smarca5	95	81.579	MGP_PahariEiJ_G0031579	Smarca1	93	81.579	Mus_pahari
ENSLBEG00000018112	smarca5	95	81.407	MGP_SPRETEiJ_G0034192	Smarca1	94	81.407	Mus_spretus
ENSLBEG00000018112	smarca5	95	81.737	ENSMPUG00000017423	SMARCA1	88	81.737	Mustela_putorius_furo
ENSLBEG00000018112	smarca5	95	80.378	ENSMLUG00000029614	SMARCA1	94	80.080	Myotis_lucifugus
ENSLBEG00000018112	smarca5	93	82.698	ENSNGAG00000006492	Smarca1	91	82.741	Nannospalax_galili
ENSLBEG00000018112	smarca5	96	96.177	ENSNBRG00000004463	smarca5	99	96.177	Neolamprologus_brichardi
ENSLBEG00000018112	smarca5	95	80.938	ENSNLEG00000015179	SMARCA1	95	82.914	Nomascus_leucogenys
ENSLBEG00000018112	smarca5	89	75.796	ENSMEUG00000008819	SMARCA1	99	75.796	Notamacropus_eugenii
ENSLBEG00000018112	smarca5	97	79.882	ENSODEG00000012163	SMARCA1	91	82.139	Octodon_degus
ENSLBEG00000018112	smarca5	100	95.560	ENSONIG00000009993	smarca5	100	95.560	Oreochromis_niloticus
ENSLBEG00000018112	smarca5	94	84.568	ENSOANG00000002862	SMARCA1	99	84.568	Ornithorhynchus_anatinus
ENSLBEG00000018112	smarca5	96	82.779	ENSOCUG00000001047	SMARCA1	94	82.779	Oryctolagus_cuniculus
ENSLBEG00000018112	smarca5	100	96.150	ENSORLG00000021998	smarca5	100	96.150	Oryzias_latipes
ENSLBEG00000018112	smarca5	100	96.146	ENSORLG00020017679	smarca5	100	96.146	Oryzias_latipes_hni
ENSLBEG00000018112	smarca5	100	96.239	ENSORLG00015017210	smarca5	100	96.239	Oryzias_latipes_hsok
ENSLBEG00000018112	smarca5	100	95.656	ENSOMEG00000000086	smarca5	100	95.656	Oryzias_melastigma
ENSLBEG00000018112	smarca5	93	83.060	ENSOGAG00000004399	SMARCA1	91	83.125	Otolemur_garnettii
ENSLBEG00000018112	smarca5	94	82.840	ENSOARG00000014638	SMARCA1	99	82.840	Ovis_aries
ENSLBEG00000018112	smarca5	95	82.626	ENSPPAG00000034647	SMARCA1	94	81.637	Pan_paniscus
ENSLBEG00000018112	smarca5	95	82.727	ENSPPRG00000008929	SMARCA1	94	82.727	Panthera_pardus
ENSLBEG00000018112	smarca5	95	80.933	ENSPTIG00000000915	SMARCA1	97	80.933	Panthera_tigris_altaica
ENSLBEG00000018112	smarca5	95	82.626	ENSPTRG00000049876	SMARCA1	94	81.637	Pan_troglodytes
ENSLBEG00000018112	smarca5	95	82.626	ENSPANG00000003871	SMARCA1	94	81.637	Papio_anubis
ENSLBEG00000018112	smarca5	95	81.504	ENSPKIG00000013411	smarca1	99	80.909	Paramormyrops_kingsleyae
ENSLBEG00000018112	smarca5	94	83.951	ENSPSIG00000010101	SMARCA1	99	83.951	Pelodiscus_sinensis
ENSLBEG00000018112	smarca5	93	82.492	ENSPEMG00000017503	Smarca1	91	82.531	Peromyscus_maniculatus_bairdii
ENSLBEG00000018112	smarca5	95	84.024	ENSPCIG00000015460	SMARCA1	97	84.024	Phascolarctos_cinereus
ENSLBEG00000018112	smarca5	100	95.459	ENSPFOG00000007649	smarca5	100	95.652	Poecilia_formosa
ENSLBEG00000018112	smarca5	100	95.459	ENSPLAG00000003363	smarca5	100	95.652	Poecilia_latipinna
ENSLBEG00000018112	smarca5	100	95.556	ENSPMEG00000019849	smarca5	100	95.749	Poecilia_mexicana
ENSLBEG00000018112	smarca5	100	95.459	ENSPREG00000023250	smarca5	100	95.652	Poecilia_reticulata
ENSLBEG00000018112	smarca5	95	79.798	ENSPPYG00000020703	SMARCA1	93	79.798	Pongo_abelii
ENSLBEG00000018112	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	79.822	Propithecus_coquereli
ENSLBEG00000018112	smarca5	87	83.075	ENSPVAG00000003805	SMARCA1	86	83.158	Pteropus_vampyrus
ENSLBEG00000018112	smarca5	58	95.982	ENSPNYG00000012299	smarca5	92	96.330	Pundamilia_nyererei
ENSLBEG00000018112	smarca5	95	81.717	ENSRNOG00000003762	Smarca1	94	81.717	Rattus_norvegicus
ENSLBEG00000018112	smarca5	95	82.727	ENSRROG00000034167	SMARCA1	94	81.737	Rhinopithecus_roxellana
ENSLBEG00000018112	smarca5	94	83.044	ENSSBOG00000020641	SMARCA1	99	83.044	Saimiri_boliviensis_boliviensis
ENSLBEG00000018112	smarca5	94	80.144	ENSSHAG00000013518	SMARCA1	99	80.144	Sarcophilus_harrisii
ENSLBEG00000018112	smarca5	95	92.959	ENSSFOG00015016794	smarca5	100	92.990	Scleropages_formosus
ENSLBEG00000018112	smarca5	97	82.034	ENSSFOG00015009043	smarca1	97	83.620	Scleropages_formosus
ENSLBEG00000018112	smarca5	100	96.718	ENSSMAG00000004801	smarca5	100	96.718	Scophthalmus_maximus
ENSLBEG00000018112	smarca5	100	95.938	ENSSDUG00000020690	smarca5	100	96.035	Seriola_dumerili
ENSLBEG00000018112	smarca5	100	95.938	ENSSLDG00000025190	smarca5	100	96.035	Seriola_lalandi_dorsalis
ENSLBEG00000018112	smarca5	79	84.342	ENSSARG00000000842	SMARCA1	81	84.342	Sorex_araneus
ENSLBEG00000018112	smarca5	95	82.843	ENSSPUG00000000590	SMARCA1	96	82.710	Sphenodon_punctatus
ENSLBEG00000018112	smarca5	100	96.718	ENSSPAG00000002894	smarca5	100	96.718	Stegastes_partitus
ENSLBEG00000018112	smarca5	94	83.196	ENSSSCG00000012649	SMARCA1	96	81.919	Sus_scrofa
ENSLBEG00000018112	smarca5	95	83.299	ENSTGUG00000003899	-	99	83.299	Taeniopygia_guttata
ENSLBEG00000018112	smarca5	100	95.072	ENSTRUG00000014094	smarca5	100	95.072	Takifugu_rubripes
ENSLBEG00000018112	smarca5	98	93.996	ENSTNIG00000017717	smarca5	97	94.653	Tetraodon_nigroviridis
ENSLBEG00000018112	smarca5	86	82.373	ENSTBEG00000014973	SMARCA1	89	82.413	Tupaia_belangeri
ENSLBEG00000018112	smarca5	93	79.141	ENSTTRG00000006168	SMARCA1	97	79.024	Tursiops_truncatus
ENSLBEG00000018112	smarca5	95	82.525	ENSUAMG00000020201	SMARCA1	93	82.525	Ursus_americanus
ENSLBEG00000018112	smarca5	97	77.349	ENSUMAG00000004073	SMARCA1	98	83.693	Ursus_maritimus
ENSLBEG00000018112	smarca5	74	86.842	ENSVPAG00000010492	-	77	87.197	Vicugna_pacos
ENSLBEG00000018112	smarca5	95	82.727	ENSVVUG00000008878	SMARCA1	98	84.468	Vulpes_vulpes
ENSLBEG00000018112	smarca5	95	83.655	ENSXETG00000001526	smarca1	99	83.655	Xenopus_tropicalis
ENSLBEG00000018112	smarca5	97	96.230	ENSXCOG00000011170	smarca5	100	96.230	Xiphophorus_couchianus
ENSLBEG00000018112	smarca5	100	96.039	ENSXMAG00000009678	smarca5	100	96.039	Xiphophorus_maculatus