EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018180 (Gene tree)
Gene ID: 109983865
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 1328 bases
Position: chrFKLU01000062.1:1145950-1147277
Accession: 109983865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023704	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000024946	-	676	XM_020633780	ENSLBEP00000023704	203 (aa)	XP_020489436	UPI0009B3F093

Gene Model

Click here to download ENSLBEG00000018180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018180	si:dkey-13a21.4	83	37.059	ENSLBEG00000027781	rab1ab	82	37.059
ENSLBEG00000018180	si:dkey-13a21.4	87	34.831	ENSLBEG00000019435	rab14	81	34.831
ENSLBEG00000018180	si:dkey-13a21.4	83	37.059	ENSLBEG00000028426	RAB1A	82	37.059
ENSLBEG00000018180	si:dkey-13a21.4	95	35.751	ENSLBEG00000027226	-	79	35.751
ENSLBEG00000018180	si:dkey-13a21.4	83	50.000	ENSLBEG00000020582	rab9a	84	50.000
ENSLBEG00000018180	si:dkey-13a21.4	90	52.174	ENSLBEG00000017798	-	89	52.174
ENSLBEG00000018180	si:dkey-13a21.4	80	35.976	ENSLBEG00000010408	-	73	35.976
ENSLBEG00000018180	si:dkey-13a21.4	80	37.195	ENSLBEG00000020796	rab2a	81	37.342
ENSLBEG00000018180	si:dkey-13a21.4	96	35.897	ENSLBEG00000005791	-	88	35.897
ENSLBEG00000018180	si:dkey-13a21.4	96	33.000	ENSLBEG00000016446	rab25b	94	33.000
ENSLBEG00000018180	si:dkey-13a21.4	81	35.152	ENSLBEG00000013176	rab23	73	35.714
ENSLBEG00000018180	si:dkey-13a21.4	87	38.547	ENSLBEG00000007681	si:dkey-16l2.16	96	35.437
ENSLBEG00000018180	si:dkey-13a21.4	74	31.013	ENSLBEG00000020868	rasl11b	61	31.013
ENSLBEG00000018180	si:dkey-13a21.4	95	34.021	ENSLBEG00000003235	rab22a	97	34.021
ENSLBEG00000018180	si:dkey-13a21.4	92	33.158	ENSLBEG00000019372	rab6bb	88	33.158
ENSLBEG00000018180	si:dkey-13a21.4	98	35.577	ENSLBEG00000014427	rab33a	90	35.577
ENSLBEG00000018180	si:dkey-13a21.4	88	34.239	ENSLBEG00000027539	-	80	34.239
ENSLBEG00000018180	si:dkey-13a21.4	99	34.450	ENSLBEG00000025798	zgc:101559	88	34.450
ENSLBEG00000018180	si:dkey-13a21.4	96	34.171	ENSLBEG00000008746	RAB41	92	34.171
ENSLBEG00000018180	si:dkey-13a21.4	78	33.962	ENSLBEG00000016417	rab11al	74	33.962
ENSLBEG00000018180	si:dkey-13a21.4	96	32.828	ENSLBEG00000013463	rab15	91	32.828
ENSLBEG00000018180	si:dkey-13a21.4	77	37.342	ENSLBEG00000001193	rab42a	71	37.342
ENSLBEG00000018180	si:dkey-13a21.4	78	32.704	ENSLBEG00000015248	rab11bb	71	32.704
ENSLBEG00000018180	si:dkey-13a21.4	77	37.107	ENSLBEG00000022630	-	73	37.107
ENSLBEG00000018180	si:dkey-13a21.4	88	35.196	ENSLBEG00000002516	rab5aa	77	35.196
ENSLBEG00000018180	si:dkey-13a21.4	94	35.602	ENSLBEG00000026779	rab13	94	35.602
ENSLBEG00000018180	si:dkey-13a21.4	75	36.306	ENSLBEG00000028391	dnajc27	56	36.306
ENSLBEG00000018180	si:dkey-13a21.4	84	37.500	ENSLBEG00000005861	rab18a	81	37.500
ENSLBEG00000018180	si:dkey-13a21.4	84	31.579	ENSLBEG00000003644	rabl2	73	31.579
ENSLBEG00000018180	si:dkey-13a21.4	83	50.000	ENSLBEG00000005128	-	76	50.000
ENSLBEG00000018180	si:dkey-13a21.4	83	35.882	ENSLBEG00000021040	rab1ba	83	35.882
ENSLBEG00000018180	si:dkey-13a21.4	78	30.625	ENSLBEG00000014885	rheb	84	30.625
ENSLBEG00000018180	si:dkey-13a21.4	87	41.808	ENSLBEG00000001146	rab30	85	41.808
ENSLBEG00000018180	si:dkey-13a21.4	86	35.227	ENSLBEG00000003101	rab4a	81	35.227
ENSLBEG00000018180	si:dkey-13a21.4	83	39.773	ENSLBEG00000001618	rab35b	77	41.509
ENSLBEG00000018180	si:dkey-13a21.4	82	36.905	ENSLBEG00000018812	RAB29	82	36.905
ENSLBEG00000018180	si:dkey-13a21.4	80	36.585	ENSLBEG00000004128	rab5c	73	36.585
ENSLBEG00000018180	si:dkey-13a21.4	78	39.130	ENSLBEG00000013756	rab12	65	39.130
ENSLBEG00000018180	si:dkey-13a21.4	87	35.393	ENSLBEG00000026790	-	81	35.393
ENSLBEG00000018180	si:dkey-13a21.4	82	40.964	ENSLBEG00000019428	rab18b	80	40.964
ENSLBEG00000018180	si:dkey-13a21.4	82	36.905	ENSLBEG00000006152	-	85	37.500
ENSLBEG00000018180	si:dkey-13a21.4	96	32.836	ENSLBEG00000026930	rab6ba	94	32.836
ENSLBEG00000018180	si:dkey-13a21.4	89	33.152	ENSLBEG00000003748	rab6a	87	33.152
ENSLBEG00000018180	si:dkey-13a21.4	78	32.704	ENSLBEG00000004172	-	71	32.704
ENSLBEG00000018180	si:dkey-13a21.4	71	32.192	ENSLBEG00000000119	rras2	76	32.484
ENSLBEG00000018180	si:dkey-13a21.4	77	35.802	ENSLBEG00000018063	-	66	35.802
ENSLBEG00000018180	si:dkey-13a21.4	97	31.100	ENSLBEG00000026989	RAB15	97	31.100
ENSLBEG00000018180	si:dkey-13a21.4	92	34.536	ENSLBEG00000002926	si:dkey-34d22.5	86	34.536
ENSLBEG00000018180	si:dkey-13a21.4	78	32.704	ENSLBEG00000006087	rab11ba	71	32.704
ENSLBEG00000018180	si:dkey-13a21.4	73	31.788	ENSLBEG00000019137	rhebl1	75	31.788
ENSLBEG00000018180	si:dkey-13a21.4	100	49.282	ENSLBEG00000001796	RAB7A	100	49.282
ENSLBEG00000018180	si:dkey-13a21.4	90	31.351	ENSLBEG00000026006	rab34a	68	31.351
ENSLBEG00000018180	si:dkey-13a21.4	78	38.750	ENSLBEG00000001313	RAB39B	74	38.750
ENSLBEG00000018180	si:dkey-13a21.4	78	38.365	ENSLBEG00000002367	rab25a	73	38.365
ENSLBEG00000018180	si:dkey-13a21.4	96	46.734	ENSLBEG00000011478	rab9b	91	46.734
ENSLBEG00000018180	si:dkey-13a21.4	75	38.961	ENSLBEG00000026777	rab33ba	64	39.735
ENSLBEG00000018180	si:dkey-13a21.4	75	30.719	ENSLBEG00000027628	si:cabz01085950.1	74	30.719
ENSLBEG00000018180	si:dkey-13a21.4	88	33.149	ENSLBEG00000027819	rab34b	75	34.641
ENSLBEG00000018180	si:dkey-13a21.4	78	32.704	ENSLBEG00000005981	-	69	32.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018180	si:dkey-13a21.4	100	85.294	ENSACIG00000011024	si:dkey-13a21.4	100	85.294	Amphilophus_citrinellus
ENSLBEG00000018180	si:dkey-13a21.4	100	80.392	ENSAOCG00000020491	si:dkey-13a21.4	100	80.392	Amphiprion_ocellaris
ENSLBEG00000018180	si:dkey-13a21.4	100	80.392	ENSAPEG00000023338	si:dkey-13a21.4	92	80.392	Amphiprion_percula
ENSLBEG00000018180	si:dkey-13a21.4	100	83.333	ENSATEG00000014958	si:dkey-13a21.4	100	83.333	Anabas_testudineus
ENSLBEG00000018180	si:dkey-13a21.4	96	51.282	ENSACAG00000012345	-	97	51.282	Anolis_carolinensis
ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	ENSACLG00000021109	si:dkey-13a21.4	99	84.804	Astatotilapia_calliptera
ENSLBEG00000018180	si:dkey-13a21.4	100	52.381	ENSAMXG00000032663	si:dkey-13a21.4	97	52.381	Astyanax_mexicanus
ENSLBEG00000018180	si:dkey-13a21.4	87	54.494	WBGene00004271	rab-7	98	49.510	Caenorhabditis_elegans
ENSLBEG00000018180	si:dkey-13a21.4	100	82.843	ENSCVAG00000001150	si:dkey-13a21.4	100	82.843	Cyprinodon_variegatus
ENSLBEG00000018180	si:dkey-13a21.4	100	60.591	ENSDARG00000026098	si:dkey-13a21.4	99	60.591	Danio_rerio
ENSLBEG00000018180	si:dkey-13a21.4	91	50.532	ENSDNOG00000043559	-	100	48.058	Dasypus_novemcinctus
ENSLBEG00000018180	si:dkey-13a21.4	100	80.976	ENSFHEG00000002502	si:dkey-13a21.4	100	80.976	Fundulus_heteroclitus
ENSLBEG00000018180	si:dkey-13a21.4	100	81.373	ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	Gambusia_affinis
ENSLBEG00000018180	si:dkey-13a21.4	100	85.294	ENSHBUG00000014023	si:dkey-13a21.4	99	85.294	Haplochromis_burtoni
ENSLBEG00000018180	si:dkey-13a21.4	86	75.000	ENSKMAG00000021039	si:dkey-13a21.4	74	75.000	Kryptolebias_marmoratus
ENSLBEG00000018180	si:dkey-13a21.4	100	58.537	ENSLOCG00000014749	si:dkey-13a21.4	100	58.537	Lepisosteus_oculatus
ENSLBEG00000018180	si:dkey-13a21.4	88	55.056	ENSLAFG00000028984	-	86	55.056	Loxodonta_africana
ENSLBEG00000018180	si:dkey-13a21.4	100	82.353	ENSMAMG00000021095	si:dkey-13a21.4	100	82.353	Mastacembelus_armatus
ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	ENSMZEG00005010220	si:dkey-13a21.4	99	84.804	Maylandia_zebra
ENSLBEG00000018180	si:dkey-13a21.4	98	86.500	ENSNBRG00000023214	si:dkey-13a21.4	97	86.500	Neolamprologus_brichardi
ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	ENSONIG00000020296	si:dkey-13a21.4	100	84.804	Oreochromis_niloticus
ENSLBEG00000018180	si:dkey-13a21.4	96	80.513	ENSORLG00000025098	si:dkey-13a21.4	96	80.513	Oryzias_latipes
ENSLBEG00000018180	si:dkey-13a21.4	96	81.026	ENSORLG00020019465	si:dkey-13a21.4	96	81.026	Oryzias_latipes_hni
ENSLBEG00000018180	si:dkey-13a21.4	96	81.026	ENSORLG00015015121	si:dkey-13a21.4	96	81.026	Oryzias_latipes_hsok
ENSLBEG00000018180	si:dkey-13a21.4	100	61.463	ENSPKIG00000008691	si:dkey-13a21.4	100	61.463	Paramormyrops_kingsleyae
ENSLBEG00000018180	si:dkey-13a21.4	93	79.365	ENSPMGG00000023170	si:dkey-13a21.4	95	78.000	Periophthalmus_magnuspinnatus
ENSLBEG00000018180	si:dkey-13a21.4	100	82.843	ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	Poecilia_formosa
ENSLBEG00000018180	si:dkey-13a21.4	100	82.843	ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	Poecilia_latipinna
ENSLBEG00000018180	si:dkey-13a21.4	100	82.843	ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	Poecilia_mexicana
ENSLBEG00000018180	si:dkey-13a21.4	100	82.353	ENSPREG00000022241	si:dkey-13a21.4	100	82.353	Poecilia_reticulata
ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	ENSPNYG00000018613	si:dkey-13a21.4	99	84.804	Pundamilia_nyererei
ENSLBEG00000018180	si:dkey-13a21.4	100	43.541	YML001W	YPT7	100	43.541	Saccharomyces_cerevisiae
ENSLBEG00000018180	si:dkey-13a21.4	96	63.265	ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	Scleropages_formosus
ENSLBEG00000018180	si:dkey-13a21.4	97	81.313	ENSSMAG00000013945	si:dkey-13a21.4	96	81.313	Scophthalmus_maximus
ENSLBEG00000018180	si:dkey-13a21.4	100	85.784	ENSSDUG00000019738	si:dkey-13a21.4	100	85.784	Seriola_dumerili
ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	ENSSLDG00000011597	si:dkey-13a21.4	100	84.804	Seriola_lalandi_dorsalis
ENSLBEG00000018180	si:dkey-13a21.4	96	50.256	ENSXETG00000014257	mgc75872	97	50.256	Xenopus_tropicalis