EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000018267 (Gene tree)
Gene ID: 109987341
Gene Symbol: matr3l1.1
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 16578 bases
Position: chrFKLU01000114.1:43105-59682
Accession: 109987341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023802	RRM_5	PF13893.6	1.4e-07	1	1
ENSLBEP00000023862	RRM_5	PF13893.6	1.4e-07	1	1
ENSLBEP00000023828	RRM_1	PF00076.22	5e-09	1	1
ENSLBEP00000023802	RRM_1	PF00076.22	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025044	-	4010	XM_020638383	ENSLBEP00000023802	1025 (aa)	XP_020494039	-
ENSLBET00000025070	-	3923	-	ENSLBEP00000023828	996 (aa)	-	-
ENSLBET00000025104	-	4034	-	ENSLBEP00000023862	1033 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000018267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018267	matr3l1.1	83	38.462	ENSG00000015479	MATR3	99	36.923	Homo_sapiens
ENSLBEG00000018267	matr3l1.1	83	38.971	ENSAPLG00000008118	-	50	40.556	Anas_platyrhynchos
ENSLBEG00000018267	matr3l1.1	86	36.752	ENSANAG00000022951	-	67	39.665	Aotus_nancymaae
ENSLBEG00000018267	matr3l1.1	79	52.103	ENSACLG00000015903	matr3l1.1	76	56.881	Astatotilapia_calliptera
ENSLBEG00000018267	matr3l1.1	94	49.503	ENSAMXG00000010685	matr3l1.1	83	52.144	Astyanax_mexicanus
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSCJAG00000006888	-	63	43.210	Callithrix_jacchus
ENSLBEG00000018267	matr3l1.1	84	41.935	ENSCAFG00000001345	MATR3	51	39.665	Canis_familiaris
ENSLBEG00000018267	matr3l1.1	83	42.308	ENSCAFG00020010504	-	66	39.665	Canis_lupus_dingo
ENSLBEG00000018267	matr3l1.1	72	37.607	ENSCHIG00000025746	-	50	39.665	Capra_hircus
ENSLBEG00000018267	matr3l1.1	69	43.210	ENSTSYG00000011028	-	64	41.772	Carlito_syrichta
ENSLBEG00000018267	matr3l1.1	85	38.596	ENSCPOG00000014076	-	70	39.665	Cavia_porcellus
ENSLBEG00000018267	matr3l1.1	76	35.081	ENSCCAG00000025074	-	63	43.210	Cebus_capucinus
ENSLBEG00000018267	matr3l1.1	65	43.210	ENSCATG00000041304	-	63	43.210	Cercocebus_atys
ENSLBEG00000018267	matr3l1.1	85	38.596	ENSCLAG00000015998	-	51	39.665	Chinchilla_lanigera
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSCANG00000028224	-	64	43.210	Colobus_angolensis_palliatus
ENSLBEG00000018267	matr3l1.1	63	53.704	ENSCGRG00001020227	Matr3	64	43.210	Cricetulus_griseus_chok1gshd
ENSLBEG00000018267	matr3l1.1	86	36.752	ENSEASG00005020857	-	50	39.665	Equus_asinus_asinus
ENSLBEG00000018267	matr3l1.1	86	36.752	ENSECAG00000012882	MATR3	50	39.665	Equus_caballus
ENSLBEG00000018267	matr3l1.1	81	49.020	ENSELUG00000021651	si:ch211-271b14.1	64	49.020	Esox_lucius
ENSLBEG00000018267	matr3l1.1	86	38.462	ENSFCAG00000021911	-	70	39.665	Felis_catus
ENSLBEG00000018267	matr3l1.1	88	34.524	ENSFDAG00000017675	-	73	39.665	Fukomys_damarensis
ENSLBEG00000018267	matr3l1.1	84	44.444	ENSGGOG00000007308	-	63	44.444	Gorilla_gorilla
ENSLBEG00000018267	matr3l1.1	87	36.567	ENSHGLG00000004673	MATR3	72	39.665	Heterocephalus_glaber_female
ENSLBEG00000018267	matr3l1.1	78	37.190	ENSHGLG00100006442	-	61	39.665	Heterocephalus_glaber_male
ENSLBEG00000018267	matr3l1.1	90	74.138	ENSHCOG00000013223	matr3l1.1	50	48.250	Hippocampus_comes
ENSLBEG00000018267	matr3l1.1	86	38.462	ENSSTOG00000014746	-	65	42.553	Ictidomys_tridecemlineatus
ENSLBEG00000018267	matr3l1.1	68	53.704	ENSJJAG00000021710	-	59	51.786	Jaculus_jaculus
ENSLBEG00000018267	matr3l1.1	58	30.203	ENSJJAG00000011022	-	84	30.025	Jaculus_jaculus
ENSLBEG00000018267	matr3l1.1	85	50.000	ENSLACG00000006743	-	51	40.936	Latimeria_chalumnae
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSMFAG00000000634	-	63	43.210	Macaca_fascicularis
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSMMUG00000016741	MATR3	63	43.210	Macaca_mulatta
ENSLBEG00000018267	matr3l1.1	51	39.665	ENSMMUG00000015963	-	62	39.665	Macaca_mulatta
ENSLBEG00000018267	matr3l1.1	70	38.462	ENSMNEG00000042856	-	63	43.210	Macaca_nemestrina
ENSLBEG00000018267	matr3l1.1	70	38.462	ENSMLEG00000041178	-	63	43.210	Mandrillus_leucophaeus
ENSLBEG00000018267	matr3l1.1	84	74.171	ENSMAMG00000013840	matr3l1.1	89	70.961	Mastacembelus_armatus
ENSLBEG00000018267	matr3l1.1	80	41.772	ENSMICG00000012438	-	64	42.857	Microcebus_murinus
ENSLBEG00000018267	matr3l1.1	69	53.704	ENSMOCG00000015711	Matr3	59	53.704	Microtus_ochrogaster
ENSLBEG00000018267	matr3l1.1	69	53.704	MGP_CAROLIEiJ_G0022108	Matr3	63	43.210	Mus_caroli
ENSLBEG00000018267	matr3l1.1	81	53.704	MGP_PahariEiJ_G0018842	Matr3	70	43.210	Mus_pahari
ENSLBEG00000018267	matr3l1.1	69	53.704	MGP_SPRETEiJ_G0023020	Matr3	59	53.704	Mus_spretus
ENSLBEG00000018267	matr3l1.1	88	35.766	ENSMPUG00000009297	-	51	39.665	Mustela_putorius_furo
ENSLBEG00000018267	matr3l1.1	71	43.210	ENSNGAG00000017452	Matr3	63	43.210	Nannospalax_galili
ENSLBEG00000018267	matr3l1.1	76	35.081	ENSNLEG00000009093	-	64	43.210	Nomascus_leucogenys
ENSLBEG00000018267	matr3l1.1	81	53.704	ENSODEG00000003015	-	59	53.704	Octodon_degus
ENSLBEG00000018267	matr3l1.1	70	41.489	ENSOCUG00000026311	MATR3	50	39.665	Oryctolagus_cuniculus
ENSLBEG00000018267	matr3l1.1	79	60.692	ENSORLG00000025674	matr3l1.1	97	59.574	Oryzias_latipes
ENSLBEG00000018267	matr3l1.1	99	58.881	ENSOMEG00000022287	matr3l1.1	89	60.314	Oryzias_melastigma
ENSLBEG00000018267	matr3l1.1	72	37.607	ENSOARG00000016931	-	50	39.665	Ovis_aries
ENSLBEG00000018267	matr3l1.1	55	34.677	ENSPPAG00000026720	-	96	31.884	Pan_paniscus
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSPPAG00000001418	-	63	43.210	Pan_paniscus
ENSLBEG00000018267	matr3l1.1	86	37.607	ENSPPRG00000008004	-	65	41.489	Panthera_pardus
ENSLBEG00000018267	matr3l1.1	85	41.489	ENSPTIG00000010711	-	52	39.665	Panthera_tigris_altaica
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSPTRG00000017294	MATR3	63	43.210	Pan_troglodytes
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSPANG00000012018	-	63	43.210	Papio_anubis
ENSLBEG00000018267	matr3l1.1	65	43.210	ENSPANG00000032489	-	64	43.210	Papio_anubis
ENSLBEG00000018267	matr3l1.1	80	43.210	ENSPCOG00000025718	-	63	43.210	Propithecus_coquereli
ENSLBEG00000018267	matr3l1.1	60	66.575	ENSPNYG00000015855	-	99	66.757	Pundamilia_nyererei
ENSLBEG00000018267	matr3l1.1	63	30.346	ENSPNAG00000030007	si:ch211-271b14.1	63	48.276	Pygocentrus_nattereri
ENSLBEG00000018267	matr3l1.1	65	43.210	ENSRBIG00000034713	-	63	43.210	Rhinopithecus_bieti
ENSLBEG00000018267	matr3l1.1	72	43.210	ENSRROG00000043949	-	63	43.210	Rhinopithecus_roxellana
ENSLBEG00000018267	matr3l1.1	84	43.210	ENSRROG00000039415	-	63	43.210	Rhinopithecus_roxellana
ENSLBEG00000018267	matr3l1.1	86	35.897	ENSSBOG00000030159	-	63	43.210	Saimiri_boliviensis_boliviensis
ENSLBEG00000018267	matr3l1.1	99	71.302	ENSSDUG00000015369	matr3l1.1	89	71.598	Seriola_dumerili
ENSLBEG00000018267	matr3l1.1	88	35.766	ENSSSCG00000014343	-	65	41.489	Sus_scrofa
ENSLBEG00000018267	matr3l1.1	54	59.259	ENSTGUG00000014568	MATR3	55	39.007	Taeniopygia_guttata
ENSLBEG00000018267	matr3l1.1	68	61.416	ENSTRUG00000001692	-	80	59.137	Takifugu_rubripes
ENSLBEG00000018267	matr3l1.1	83	71.622	ENSTNIG00000003166	matr3l1.1	100	63.559	Tetraodon_nigroviridis
ENSLBEG00000018267	matr3l1.1	88	35.766	ENSUMAG00000015808	-	51	39.326	Ursus_maritimus
ENSLBEG00000018267	matr3l1.1	82	41.489	ENSVVUG00000020287	-	65	41.489	Vulpes_vulpes
ENSLBEG00000018267	matr3l1.1	75	52.315	ENSXMAG00000014107	-	83	51.157	Xiphophorus_maculatus