EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000018302 (Gene tree)
Gene ID: 109998287
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 31474 bases
Position: chrFKLU01000474.1:197819-229292
Accession: 109998287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023970	CPSF_A	PF03178.15	7.6e-99	1	1
ENSLBEP00000024007	CPSF_A	PF03178.15	1.8e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025251	-	5881	-	ENSLBEP00000024007	1107 (aa)	-	-
ENSLBET00000025214	-	6154	XM_020653074	ENSLBEP00000023970	1217 (aa)	XP_020508730	UPI0009B485F7

Gene Model

Click here to download ENSLBEG00000018302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018302	sf3b3	100	92.933	ENSG00000189091	SF3B3	100	96.491	Homo_sapiens
ENSLBEG00000018302	sf3b3	99	97.096	ENSAPOG00000006172	sf3b3	98	97.950	Acanthochromis_polyacanthus
ENSLBEG00000018302	sf3b3	100	92.787	ENSAMEG00000002187	SF3B3	100	92.787	Ailuropoda_melanoleuca
ENSLBEG00000018302	sf3b3	92	95.625	ENSACIG00000016487	sf3b3	100	95.625	Amphilophus_citrinellus
ENSLBEG00000018302	sf3b3	100	97.946	ENSAOCG00000007158	sf3b3	100	97.946	Amphiprion_ocellaris
ENSLBEG00000018302	sf3b3	100	97.946	ENSAPEG00000022786	sf3b3	100	97.946	Amphiprion_percula
ENSLBEG00000018302	sf3b3	100	98.274	ENSATEG00000013708	sf3b3	100	98.274	Anabas_testudineus
ENSLBEG00000018302	sf3b3	89	93.293	ENSAPLG00000004996	SF3B3	99	93.293	Anas_platyrhynchos
ENSLBEG00000018302	sf3b3	100	93.016	ENSACAG00000001817	SF3B3	100	93.016	Anolis_carolinensis
ENSLBEG00000018302	sf3b3	100	92.933	ENSANAG00000028001	SF3B3	100	92.933	Aotus_nancymaae
ENSLBEG00000018302	sf3b3	99	97.187	ENSACLG00000022555	sf3b3	98	97.865	Astatotilapia_calliptera
ENSLBEG00000018302	sf3b3	100	97.371	ENSAMXG00000003410	sf3b3	100	97.371	Astyanax_mexicanus
ENSLBEG00000018302	sf3b3	100	92.933	ENSBTAG00000010627	SF3B3	100	92.933	Bos_taurus
ENSLBEG00000018302	sf3b3	100	60.016	WBGene00019323	teg-4	100	60.016	Caenorhabditis_elegans
ENSLBEG00000018302	sf3b3	100	92.933	ENSCJAG00000014773	SF3B3	99	92.933	Callithrix_jacchus
ENSLBEG00000018302	sf3b3	100	93.016	ENSCAFG00000020151	SF3B3	100	93.016	Canis_familiaris
ENSLBEG00000018302	sf3b3	100	93.016	ENSCAFG00020020912	SF3B3	100	93.016	Canis_lupus_dingo
ENSLBEG00000018302	sf3b3	100	93.016	ENSCHIG00000019822	SF3B3	100	93.016	Capra_hircus
ENSLBEG00000018302	sf3b3	100	92.933	ENSTSYG00000007910	SF3B3	100	92.933	Carlito_syrichta
ENSLBEG00000018302	sf3b3	84	79.405	ENSCAPG00000001484	SF3B3	92	79.405	Cavia_aperea
ENSLBEG00000018302	sf3b3	100	91.619	ENSCPOG00000000586	SF3B3	100	91.619	Cavia_porcellus
ENSLBEG00000018302	sf3b3	100	92.933	ENSCCAG00000017736	SF3B3	100	92.933	Cebus_capucinus
ENSLBEG00000018302	sf3b3	100	92.933	ENSCATG00000036562	SF3B3	100	92.933	Cercocebus_atys
ENSLBEG00000018302	sf3b3	100	92.933	ENSCLAG00000003921	SF3B3	100	92.933	Chinchilla_lanigera
ENSLBEG00000018302	sf3b3	100	92.933	ENSCSAG00000004371	SF3B3	100	92.933	Chlorocebus_sabaeus
ENSLBEG00000018302	sf3b3	90	88.785	ENSCHOG00000001878	SF3B3	90	88.785	Choloepus_hoffmanni
ENSLBEG00000018302	sf3b3	100	92.605	ENSCPBG00000015853	SF3B3	100	92.605	Chrysemys_picta_bellii
ENSLBEG00000018302	sf3b3	100	79.721	ENSCING00000001342	-	100	79.721	Ciona_intestinalis
ENSLBEG00000018302	sf3b3	99	78.243	ENSCSAVG00000011454	-	100	78.243	Ciona_savignyi
ENSLBEG00000018302	sf3b3	99	92.434	ENSCANG00000042920	SF3B3	100	89.811	Colobus_angolensis_palliatus
ENSLBEG00000018302	sf3b3	100	92.851	ENSCGRG00001015908	Sf3b3	100	92.851	Cricetulus_griseus_chok1gshd
ENSLBEG00000018302	sf3b3	100	92.851	ENSCGRG00000010180	Sf3b3	100	92.851	Cricetulus_griseus_crigri
ENSLBEG00000018302	sf3b3	89	97.663	ENSCSEG00000014192	sf3b3	98	97.663	Cynoglossus_semilaevis
ENSLBEG00000018302	sf3b3	100	97.781	ENSCVAG00000010459	sf3b3	100	97.781	Cyprinodon_variegatus
ENSLBEG00000018302	sf3b3	100	96.960	ENSDARG00000103553	sf3b3	100	96.960	Danio_rerio
ENSLBEG00000018302	sf3b3	85	92.864	ENSDNOG00000043626	SF3B3	100	92.864	Dasypus_novemcinctus
ENSLBEG00000018302	sf3b3	100	92.933	ENSDORG00000014176	Sf3b3	100	92.933	Dipodomys_ordii
ENSLBEG00000018302	sf3b3	100	74.472	FBgn0035162	Sf3b3	100	74.472	Drosophila_melanogaster
ENSLBEG00000018302	sf3b3	84	95.699	ENSETEG00000002729	SF3B3	84	95.699	Echinops_telfairi
ENSLBEG00000018302	sf3b3	100	86.196	ENSEBUG00000006117	sf3b3	100	86.196	Eptatretus_burgeri
ENSLBEG00000018302	sf3b3	100	93.016	ENSEASG00005013376	SF3B3	100	93.016	Equus_asinus_asinus
ENSLBEG00000018302	sf3b3	100	93.016	ENSECAG00000014053	SF3B3	100	93.016	Equus_caballus
ENSLBEG00000018302	sf3b3	93	92.456	ENSEEUG00000015611	SF3B3	93	92.456	Erinaceus_europaeus
ENSLBEG00000018302	sf3b3	100	95.574	ENSELUG00000015417	sf3b3	100	95.574	Esox_lucius
ENSLBEG00000018302	sf3b3	100	93.016	ENSFCAG00000009487	SF3B3	100	93.016	Felis_catus
ENSLBEG00000018302	sf3b3	100	92.687	ENSFALG00000007372	SF3B3	100	92.687	Ficedula_albicollis
ENSLBEG00000018302	sf3b3	100	92.933	ENSFDAG00000002608	SF3B3	100	92.933	Fukomys_damarensis
ENSLBEG00000018302	sf3b3	100	98.603	ENSFHEG00000017824	sf3b3	100	98.603	Fundulus_heteroclitus
ENSLBEG00000018302	sf3b3	100	93.350	ENSGMOG00000008139	sf3b3	100	93.350	Gadus_morhua
ENSLBEG00000018302	sf3b3	100	92.933	ENSGALG00000002531	SF3B3	100	92.933	Gallus_gallus
ENSLBEG00000018302	sf3b3	100	98.028	ENSGAFG00000015206	sf3b3	100	98.028	Gambusia_affinis
ENSLBEG00000018302	sf3b3	100	97.783	ENSGACG00000002646	sf3b3	100	97.783	Gasterosteus_aculeatus
ENSLBEG00000018302	sf3b3	99	91.924	ENSGAGG00000006746	SF3B3	97	92.741	Gopherus_agassizii
ENSLBEG00000018302	sf3b3	100	92.933	ENSGGOG00000003246	SF3B3	100	92.933	Gorilla_gorilla
ENSLBEG00000018302	sf3b3	92	91.071	ENSHBUG00000005960	sf3b3	100	91.071	Haplochromis_burtoni
ENSLBEG00000018302	sf3b3	100	92.933	ENSHGLG00000010135	SF3B3	100	92.933	Heterocephalus_glaber_female
ENSLBEG00000018302	sf3b3	100	90.835	ENSHGLG00100011148	SF3B3	100	90.835	Heterocephalus_glaber_male
ENSLBEG00000018302	sf3b3	100	97.535	ENSHCOG00000011981	sf3b3	100	97.535	Hippocampus_comes
ENSLBEG00000018302	sf3b3	100	97.124	ENSIPUG00000020435	sf3b3	100	97.124	Ictalurus_punctatus
ENSLBEG00000018302	sf3b3	100	92.933	ENSSTOG00000007065	SF3B3	100	92.933	Ictidomys_tridecemlineatus
ENSLBEG00000018302	sf3b3	100	92.933	ENSJJAG00000003948	Sf3b3	100	92.933	Jaculus_jaculus
ENSLBEG00000018302	sf3b3	99	96.733	ENSKMAG00000004066	sf3b3	99	97.694	Kryptolebias_marmoratus
ENSLBEG00000018302	sf3b3	98	89.784	ENSLACG00000012501	SF3B3	99	89.784	Latimeria_chalumnae
ENSLBEG00000018302	sf3b3	100	96.552	ENSLOCG00000007566	sf3b3	100	96.552	Lepisosteus_oculatus
ENSLBEG00000018302	sf3b3	100	93.016	ENSLAFG00000012219	SF3B3	100	93.016	Loxodonta_africana
ENSLBEG00000018302	sf3b3	100	92.933	ENSMFAG00000045487	SF3B3	100	92.933	Macaca_fascicularis
ENSLBEG00000018302	sf3b3	100	92.933	ENSMMUG00000017812	SF3B3	100	92.933	Macaca_mulatta
ENSLBEG00000018302	sf3b3	100	92.933	ENSMNEG00000033385	SF3B3	100	92.933	Macaca_nemestrina
ENSLBEG00000018302	sf3b3	100	89.400	ENSMLEG00000043891	SF3B3	100	89.400	Mandrillus_leucophaeus
ENSLBEG00000018302	sf3b3	100	98.439	ENSMAMG00000016837	sf3b3	100	98.439	Mastacembelus_armatus
ENSLBEG00000018302	sf3b3	100	97.946	ENSMZEG00005010836	sf3b3	100	97.946	Maylandia_zebra
ENSLBEG00000018302	sf3b3	89	95.005	ENSMZEG00005026015	sf3b3	99	95.005	Maylandia_zebra
ENSLBEG00000018302	sf3b3	100	92.933	ENSMGAG00000001597	SF3B3	100	92.933	Meleagris_gallopavo
ENSLBEG00000018302	sf3b3	81	76.529	ENSMAUG00000013618	Sf3b3	95	76.904	Mesocricetus_auratus
ENSLBEG00000018302	sf3b3	100	91.961	ENSMICG00000001363	SF3B3	100	91.961	Microcebus_murinus
ENSLBEG00000018302	sf3b3	100	92.851	ENSMOCG00000006108	Sf3b3	100	92.851	Microtus_ochrogaster
ENSLBEG00000018302	sf3b3	89	95.560	ENSMMOG00000002598	sf3b3	97	95.560	Mola_mola
ENSLBEG00000018302	sf3b3	100	88.916	ENSMODG00000014363	SF3B3	100	88.916	Monodelphis_domestica
ENSLBEG00000018302	sf3b3	100	97.617	ENSMALG00000008014	sf3b3	100	97.617	Monopterus_albus
ENSLBEG00000018302	sf3b3	100	92.933	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.933	Mus_caroli
ENSLBEG00000018302	sf3b3	100	92.851	ENSMUSG00000033732	Sf3b3	100	92.851	Mus_musculus
ENSLBEG00000018302	sf3b3	100	92.851	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.851	Mus_spretus
ENSLBEG00000018302	sf3b3	100	93.016	ENSMPUG00000010277	SF3B3	100	93.016	Mustela_putorius_furo
ENSLBEG00000018302	sf3b3	100	92.851	ENSMLUG00000014607	SF3B3	100	92.851	Myotis_lucifugus
ENSLBEG00000018302	sf3b3	100	92.933	ENSNGAG00000021903	Sf3b3	100	92.933	Nannospalax_galili
ENSLBEG00000018302	sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSLBEG00000018302	sf3b3	100	91.461	ENSNLEG00000016127	SF3B3	100	91.461	Nomascus_leucogenys
ENSLBEG00000018302	sf3b3	92	88.874	ENSMEUG00000004479	SF3B3	94	88.874	Notamacropus_eugenii
ENSLBEG00000018302	sf3b3	98	89.858	ENSOPRG00000009847	SF3B3	100	89.858	Ochotona_princeps
ENSLBEG00000018302	sf3b3	100	92.933	ENSODEG00000014154	SF3B3	100	92.933	Octodon_degus
ENSLBEG00000018302	sf3b3	100	97.864	ENSONIG00000011198	sf3b3	100	97.864	Oreochromis_niloticus
ENSLBEG00000018302	sf3b3	100	93.098	ENSOANG00000001161	-	100	93.098	Ornithorhynchus_anatinus
ENSLBEG00000018302	sf3b3	100	90.961	ENSOCUG00000004139	SF3B3	100	90.961	Oryctolagus_cuniculus
ENSLBEG00000018302	sf3b3	100	97.946	ENSORLG00000013472	sf3b3	100	97.946	Oryzias_latipes
ENSLBEG00000018302	sf3b3	100	97.946	ENSORLG00020017473	sf3b3	100	97.946	Oryzias_latipes_hni
ENSLBEG00000018302	sf3b3	100	97.946	ENSORLG00015007710	sf3b3	100	97.946	Oryzias_latipes_hsok
ENSLBEG00000018302	sf3b3	100	97.781	ENSOMEG00000014483	sf3b3	100	97.781	Oryzias_melastigma
ENSLBEG00000018302	sf3b3	100	92.623	ENSOGAG00000016051	SF3B3	100	92.623	Otolemur_garnettii
ENSLBEG00000018302	sf3b3	100	92.787	ENSOARG00000004816	SF3B3	100	92.787	Ovis_aries
ENSLBEG00000018302	sf3b3	100	92.933	ENSPPAG00000026807	SF3B3	100	92.933	Pan_paniscus
ENSLBEG00000018302	sf3b3	100	93.016	ENSPPRG00000001686	SF3B3	100	93.016	Panthera_pardus
ENSLBEG00000018302	sf3b3	89	90.340	ENSPTIG00000020382	SF3B3	100	90.340	Panthera_tigris_altaica
ENSLBEG00000018302	sf3b3	100	92.933	ENSPTRG00000008308	SF3B3	100	92.933	Pan_troglodytes
ENSLBEG00000018302	sf3b3	100	92.933	ENSPANG00000024075	SF3B3	100	92.933	Papio_anubis
ENSLBEG00000018302	sf3b3	100	96.549	ENSPKIG00000002712	sf3b3	100	96.549	Paramormyrops_kingsleyae
ENSLBEG00000018302	sf3b3	89	93.192	ENSPSIG00000002232	SF3B3	100	93.192	Pelodiscus_sinensis
ENSLBEG00000018302	sf3b3	100	92.851	ENSPEMG00000008603	Sf3b3	100	92.851	Peromyscus_maniculatus_bairdii
ENSLBEG00000018302	sf3b3	100	90.304	ENSPMAG00000001793	sf3b3	100	90.304	Petromyzon_marinus
ENSLBEG00000018302	sf3b3	100	93.098	ENSPCIG00000014927	SF3B3	100	93.098	Phascolarctos_cinereus
ENSLBEG00000018302	sf3b3	100	98.110	ENSPFOG00000015516	sf3b3	100	98.110	Poecilia_formosa
ENSLBEG00000018302	sf3b3	100	98.110	ENSPLAG00000014330	sf3b3	100	98.110	Poecilia_latipinna
ENSLBEG00000018302	sf3b3	100	98.192	ENSPMEG00000019856	sf3b3	100	98.192	Poecilia_mexicana
ENSLBEG00000018302	sf3b3	89	98.171	ENSPREG00000019669	sf3b3	97	98.171	Poecilia_reticulata
ENSLBEG00000018302	sf3b3	95	92.795	ENSPPYG00000007539	SF3B3	100	92.795	Pongo_abelii
ENSLBEG00000018302	sf3b3	100	72.145	ENSPCAG00000002623	SF3B3	100	72.145	Procavia_capensis
ENSLBEG00000018302	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSLBEG00000018302	sf3b3	100	92.933	ENSPVAG00000000684	SF3B3	100	92.933	Pteropus_vampyrus
ENSLBEG00000018302	sf3b3	100	97.864	ENSPNYG00000003528	sf3b3	100	97.864	Pundamilia_nyererei
ENSLBEG00000018302	sf3b3	100	96.960	ENSPNAG00000015419	sf3b3	100	96.960	Pygocentrus_nattereri
ENSLBEG00000018302	sf3b3	100	92.851	ENSRNOG00000017724	Sf3b3	100	92.851	Rattus_norvegicus
ENSLBEG00000018302	sf3b3	100	92.933	ENSRBIG00000021904	SF3B3	100	92.933	Rhinopithecus_bieti
ENSLBEG00000018302	sf3b3	100	92.933	ENSRROG00000045703	SF3B3	100	92.933	Rhinopithecus_roxellana
ENSLBEG00000018302	sf3b3	100	92.933	ENSSBOG00000029156	SF3B3	100	92.933	Saimiri_boliviensis_boliviensis
ENSLBEG00000018302	sf3b3	100	93.098	ENSSHAG00000000372	SF3B3	100	93.098	Sarcophilus_harrisii
ENSLBEG00000018302	sf3b3	100	96.795	ENSSFOG00015012877	sf3b3	100	96.795	Scleropages_formosus
ENSLBEG00000018302	sf3b3	100	97.371	ENSSMAG00000014386	sf3b3	100	97.371	Scophthalmus_maximus
ENSLBEG00000018302	sf3b3	100	98.357	ENSSDUG00000021201	sf3b3	100	98.357	Seriola_dumerili
ENSLBEG00000018302	sf3b3	100	98.274	ENSSLDG00000017532	sf3b3	100	98.274	Seriola_lalandi_dorsalis
ENSLBEG00000018302	sf3b3	98	93.015	ENSSARG00000006917	SF3B3	93	93.015	Sorex_araneus
ENSLBEG00000018302	sf3b3	100	92.769	ENSSPUG00000006253	SF3B3	100	92.769	Sphenodon_punctatus
ENSLBEG00000018302	sf3b3	100	90.468	ENSSPAG00000003125	sf3b3	100	90.468	Stegastes_partitus
ENSLBEG00000018302	sf3b3	100	93.016	ENSSSCG00000025323	SF3B3	100	93.016	Sus_scrofa
ENSLBEG00000018302	sf3b3	100	92.857	ENSTGUG00000006082	SF3B3	100	92.857	Taeniopygia_guttata
ENSLBEG00000018302	sf3b3	53	87.015	ENSTRUG00000015623	sf3b3	88	87.015	Takifugu_rubripes
ENSLBEG00000018302	sf3b3	98	97.243	ENSTNIG00000004857	sf3b3	100	97.243	Tetraodon_nigroviridis
ENSLBEG00000018302	sf3b3	99	77.495	ENSTBEG00000002946	SF3B3	100	78.873	Tupaia_belangeri
ENSLBEG00000018302	sf3b3	100	92.194	ENSTTRG00000005855	SF3B3	100	92.194	Tursiops_truncatus
ENSLBEG00000018302	sf3b3	100	93.016	ENSUAMG00000006780	SF3B3	100	93.016	Ursus_americanus
ENSLBEG00000018302	sf3b3	100	93.016	ENSUMAG00000017757	SF3B3	100	93.016	Ursus_maritimus
ENSLBEG00000018302	sf3b3	100	77.896	ENSVPAG00000003202	SF3B3	100	77.896	Vicugna_pacos
ENSLBEG00000018302	sf3b3	100	93.016	ENSVVUG00000017922	SF3B3	100	93.016	Vulpes_vulpes
ENSLBEG00000018302	sf3b3	100	93.591	ENSXETG00000032869	SF3B3	100	93.591	Xenopus_tropicalis
ENSLBEG00000018302	sf3b3	85	98.195	ENSXCOG00000013628	sf3b3	97	98.195	Xiphophorus_couchianus
ENSLBEG00000018302	sf3b3	100	97.946	ENSXMAG00000006334	sf3b3	100	97.946	Xiphophorus_maculatus