EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018376 (Gene tree)
Gene ID: -
Gene Symbol: sb:cb81
Alias: LOC100334443|cb81
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 1843 bases
Position: chrFKLU01001114.1:61131-62973
Accession: 110003050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023981	zf-CCCH	PF00642.24	1.3e-22	1	2
ENSLBEP00000023981	zf-CCCH	PF00642.24	1.3e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025225	-	1227	XM_020658747	ENSLBEP00000023981	408 (aa)	XP_020514403	-

Gene Model

Click here to download ENSLBEG00000018376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018376	sb:cb81	66	38.176	ENSLBEG00000018387	zgc:114130	50	39.669
ENSLBEG00000018376	sb:cb81	97	34.735	ENSLBEG00000018380	zgc:162730	56	36.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018376	sb:cb81	67	37.580	ENSAPOG00000014912	zgc:114130	51	38.735	Acanthochromis_polyacanthus
ENSLBEG00000018376	sb:cb81	82	35.641	ENSAPOG00000014920	zgc:162730	53	36.735	Acanthochromis_polyacanthus
ENSLBEG00000018376	sb:cb81	96	64.286	ENSAPOG00000011209	sb:cb81	99	64.039	Acanthochromis_polyacanthus
ENSLBEG00000018376	sb:cb81	100	73.023	ENSACIG00000009027	sb:cb81	100	71.395	Amphilophus_citrinellus
ENSLBEG00000018376	sb:cb81	51	39.496	ENSACIG00000017366	zgc:162730	96	37.156	Amphilophus_citrinellus
ENSLBEG00000018376	sb:cb81	82	35.641	ENSAOCG00000002001	zgc:162730	53	36.929	Amphiprion_ocellaris
ENSLBEG00000018376	sb:cb81	67	37.987	ENSAOCG00000022227	zgc:114130	51	39.921	Amphiprion_ocellaris
ENSLBEG00000018376	sb:cb81	100	65.728	ENSAOCG00000024158	sb:cb81	100	65.493	Amphiprion_ocellaris
ENSLBEG00000018376	sb:cb81	67	37.419	ENSAPEG00000015497	zgc:114130	64	38.511	Amphiprion_percula
ENSLBEG00000018376	sb:cb81	100	65.493	ENSAPEG00000022405	sb:cb81	100	65.728	Amphiprion_percula
ENSLBEG00000018376	sb:cb81	66	39.203	ENSATEG00000008781	zgc:114130	51	38.525	Anabas_testudineus
ENSLBEG00000018376	sb:cb81	100	72.374	ENSATEG00000003462	sb:cb81	100	70.046	Anabas_testudineus
ENSLBEG00000018376	sb:cb81	66	37.838	ENSACLG00000022113	zgc:114130	52	39.749	Astatotilapia_calliptera
ENSLBEG00000018376	sb:cb81	100	74.074	ENSACLG00000013759	sb:cb81	100	72.685	Astatotilapia_calliptera
ENSLBEG00000018376	sb:cb81	100	37.079	ENSAMXG00000038581	zgc:114130	95	34.842	Astyanax_mexicanus
ENSLBEG00000018376	sb:cb81	100	51.376	ENSAMXG00000034874	sb:cb81	100	49.241	Astyanax_mexicanus
ENSLBEG00000018376	sb:cb81	100	37.170	ENSCPBG00000021516	ZFP36L1	53	40.000	Chrysemys_picta_bellii
ENSLBEG00000018376	sb:cb81	97	33.879	ENSCSEG00000018283	zgc:162730	97	33.184	Cynoglossus_semilaevis
ENSLBEG00000018376	sb:cb81	100	65.618	ENSCSEG00000014426	sb:cb81	86	64.480	Cynoglossus_semilaevis
ENSLBEG00000018376	sb:cb81	75	36.286	ENSCVAG00000018571	zgc:162730	65	39.636	Cyprinodon_variegatus
ENSLBEG00000018376	sb:cb81	60	45.455	ENSCVAG00000008482	zfp36l1a	63	47.431	Cyprinodon_variegatus
ENSLBEG00000018376	sb:cb81	100	67.667	ENSCVAG00000009207	sb:cb81	100	66.282	Cyprinodon_variegatus
ENSLBEG00000018376	sb:cb81	100	51.852	ENSDARG00000040503	sb:cb81	100	51.157	Danio_rerio
ENSLBEG00000018376	sb:cb81	100	34.597	ENSDARG00000040725	zgc:114130	96	34.383	Danio_rerio
ENSLBEG00000018376	sb:cb81	59	48.047	ENSDARG00000016154	zfp36l1a	62	43.529	Danio_rerio
ENSLBEG00000018376	sb:cb81	59	44.177	ENSDARG00000103720	zgc:162730	72	41.564	Danio_rerio
ENSLBEG00000018376	sb:cb81	83	36.975	ENSELUG00000013158	zgc:162730	70	39.326	Esox_lucius
ENSLBEG00000018376	sb:cb81	100	54.147	ENSELUG00000013045	sb:cb81	100	51.030	Esox_lucius
ENSLBEG00000018376	sb:cb81	100	37.674	ENSELUG00000013151	zgc:114130	97	38.407	Esox_lucius
ENSLBEG00000018376	sb:cb81	89	39.566	ENSFALG00000015146	ZFP36L1	92	38.587	Ficedula_albicollis
ENSLBEG00000018376	sb:cb81	76	38.398	ENSFHEG00000013710	zgc:162730	84	34.908	Fundulus_heteroclitus
ENSLBEG00000018376	sb:cb81	100	69.932	ENSFHEG00000022187	sb:cb81	100	68.192	Fundulus_heteroclitus
ENSLBEG00000018376	sb:cb81	59	45.783	ENSFHEG00000001313	zfp36l1a	62	47.791	Fundulus_heteroclitus
ENSLBEG00000018376	sb:cb81	60	52.060	ENSGMOG00000016803	sb:cb81	93	54.982	Gadus_morhua
ENSLBEG00000018376	sb:cb81	100	37.260	ENSGALG00000039228	ZFP36L1	53	40.833	Gallus_gallus
ENSLBEG00000018376	sb:cb81	99	63.830	ENSGAFG00000015700	sb:cb81	100	60.284	Gambusia_affinis
ENSLBEG00000018376	sb:cb81	64	46.097	ENSGAFG00000018711	zfp36l1a	64	45.312	Gambusia_affinis
ENSLBEG00000018376	sb:cb81	79	68.661	ENSGACG00000013400	sb:cb81	100	68.286	Gasterosteus_aculeatus
ENSLBEG00000018376	sb:cb81	100	37.500	ENSGAGG00000007315	ZFP36L1	53	40.417	Gopherus_agassizii
ENSLBEG00000018376	sb:cb81	66	37.793	ENSHBUG00000015051	zgc:114130	52	39.834	Haplochromis_burtoni
ENSLBEG00000018376	sb:cb81	100	74.769	ENSHBUG00000002383	sb:cb81	100	73.272	Haplochromis_burtoni
ENSLBEG00000018376	sb:cb81	100	48.018	ENSHCOG00000000792	sb:cb81	96	46.813	Hippocampus_comes
ENSLBEG00000018376	sb:cb81	65	59.630	ENSIPUG00000011378	sb:cb81	100	46.047	Ictalurus_punctatus
ENSLBEG00000018376	sb:cb81	100	71.262	ENSKMAG00000009884	sb:cb81	100	66.667	Kryptolebias_marmoratus
ENSLBEG00000018376	sb:cb81	67	39.806	ENSKMAG00000019287	zgc:114130	62	40.134	Kryptolebias_marmoratus
ENSLBEG00000018376	sb:cb81	100	45.940	ENSLACG00000015732	sb:cb81	100	46.154	Latimeria_chalumnae
ENSLBEG00000018376	sb:cb81	99	35.981	ENSLACG00000015980	-	100	33.174	Latimeria_chalumnae
ENSLBEG00000018376	sb:cb81	100	52.304	ENSLOCG00000014587	sb:cb81	100	49.652	Lepisosteus_oculatus
ENSLBEG00000018376	sb:cb81	82	36.212	ENSLOCG00000014597	zgc:162730	69	40.602	Lepisosteus_oculatus
ENSLBEG00000018376	sb:cb81	100	68.046	ENSMAMG00000020144	sb:cb81	90	66.667	Mastacembelus_armatus
ENSLBEG00000018376	sb:cb81	100	33.121	ENSMAMG00000007511	zgc:114130	50	37.600	Mastacembelus_armatus
ENSLBEG00000018376	sb:cb81	59	40.972	ENSMAMG00000007516	zgc:162730	53	36.863	Mastacembelus_armatus
ENSLBEG00000018376	sb:cb81	66	37.838	ENSMZEG00005014410	zgc:114130	52	39.749	Maylandia_zebra
ENSLBEG00000018376	sb:cb81	100	74.592	ENSMZEG00005016001	-	100	73.193	Maylandia_zebra
ENSLBEG00000018376	sb:cb81	100	74.473	ENSMZEG00005024684	sb:cb81	100	72.960	Maylandia_zebra
ENSLBEG00000018376	sb:cb81	52	38.683	ENSMMOG00000011506	zgc:162730	99	36.100	Mola_mola
ENSLBEG00000018376	sb:cb81	100	57.143	ENSMMOG00000010073	sb:cb81	100	55.035	Mola_mola
ENSLBEG00000018376	sb:cb81	50	62.780	ENSMALG00000021140	-	96	57.255	Monopterus_albus
ENSLBEG00000018376	sb:cb81	97	33.860	ENSMALG00000002348	zgc:162730	54	39.216	Monopterus_albus
ENSLBEG00000018376	sb:cb81	100	69.321	ENSNBRG00000006231	sb:cb81	100	68.065	Neolamprologus_brichardi
ENSLBEG00000018376	sb:cb81	100	74.074	ENSONIG00000001259	sb:cb81	100	73.041	Oreochromis_niloticus
ENSLBEG00000018376	sb:cb81	61	41.852	ENSONIG00000005003	zgc:162730	99	37.273	Oreochromis_niloticus
ENSLBEG00000018376	sb:cb81	100	62.587	ENSORLG00000024026	sb:cb81	86	58.430	Oryzias_latipes
ENSLBEG00000018376	sb:cb81	100	61.176	ENSORLG00020021084	sb:cb81	100	60.739	Oryzias_latipes_hni
ENSLBEG00000018376	sb:cb81	100	62.353	ENSORLG00015010105	sb:cb81	100	58.661	Oryzias_latipes_hsok
ENSLBEG00000018376	sb:cb81	100	63.810	ENSOMEG00000020565	sb:cb81	100	60.427	Oryzias_melastigma
ENSLBEG00000018376	sb:cb81	100	37.170	ENSPSIG00000008151	ZFP36L1	53	40.417	Pelodiscus_sinensis
ENSLBEG00000018376	sb:cb81	60	47.710	ENSPMGG00000009232	sb:cb81	80	46.565	Periophthalmus_magnuspinnatus
ENSLBEG00000018376	sb:cb81	76	36.236	ENSPFOG00000003665	zgc:162730	80	41.199	Poecilia_formosa
ENSLBEG00000018376	sb:cb81	100	62.736	ENSPFOG00000013806	sb:cb81	100	59.765	Poecilia_formosa
ENSLBEG00000018376	sb:cb81	88	62.234	ENSPLAG00000020158	sb:cb81	96	59.416	Poecilia_latipinna
ENSLBEG00000018376	sb:cb81	100	62.736	ENSPMEG00000022425	sb:cb81	100	59.765	Poecilia_mexicana
ENSLBEG00000018376	sb:cb81	76	36.517	ENSPMEG00000000341	zgc:162730	99	33.636	Poecilia_mexicana
ENSLBEG00000018376	sb:cb81	100	62.850	ENSPREG00000017495	sb:cb81	100	60.748	Poecilia_reticulata
ENSLBEG00000018376	sb:cb81	76	36.517	ENSPREG00000021263	zgc:162730	54	39.256	Poecilia_reticulata
ENSLBEG00000018376	sb:cb81	66	37.966	ENSPNYG00000015546	zgc:114130	52	39.749	Pundamilia_nyererei
ENSLBEG00000018376	sb:cb81	100	69.767	ENSPNYG00000007502	sb:cb81	100	69.213	Pundamilia_nyererei
ENSLBEG00000018376	sb:cb81	100	50.115	ENSPNAG00000030063	sb:cb81	100	52.113	Pygocentrus_nattereri
ENSLBEG00000018376	sb:cb81	100	35.135	ENSPNAG00000023029	zgc:114130	61	34.680	Pygocentrus_nattereri
ENSLBEG00000018376	sb:cb81	100	33.333	ENSSFOG00015020649	ZFP36L1	68	42.460	Scleropages_formosus
ENSLBEG00000018376	sb:cb81	99	46.262	ENSSFOG00015003179	sb:cb81	99	44.811	Scleropages_formosus
ENSLBEG00000018376	sb:cb81	50	71.491	ENSSMAG00000004403	sb:cb81	94	69.298	Scophthalmus_maximus
ENSLBEG00000018376	sb:cb81	97	33.953	ENSSDUG00000002247	zgc:162730	99	31.235	Seriola_dumerili
ENSLBEG00000018376	sb:cb81	100	75.566	ENSSDUG00000004426	sb:cb81	100	73.409	Seriola_dumerili
ENSLBEG00000018376	sb:cb81	72	37.864	ENSSLDG00000011048	zfp36l1b	61	43.529	Seriola_lalandi_dorsalis
ENSLBEG00000018376	sb:cb81	64	38.699	ENSSLDG00000008496	zgc:114130	50	37.759	Seriola_lalandi_dorsalis
ENSLBEG00000018376	sb:cb81	100	76.364	ENSSLDG00000018035	sb:cb81	100	73.973	Seriola_lalandi_dorsalis
ENSLBEG00000018376	sb:cb81	97	33.721	ENSSLDG00000008502	zgc:162730	99	31.469	Seriola_lalandi_dorsalis
ENSLBEG00000018376	sb:cb81	100	37.799	ENSSPUG00000002037	ZFP36L1	100	37.170	Sphenodon_punctatus
ENSLBEG00000018376	sb:cb81	100	66.589	ENSSPAG00000013546	sb:cb81	100	66.821	Stegastes_partitus
ENSLBEG00000018376	sb:cb81	82	35.751	ENSSPAG00000006851	zgc:162730	53	36.929	Stegastes_partitus
ENSLBEG00000018376	sb:cb81	100	63.170	ENSTRUG00000020720	sb:cb81	100	61.305	Takifugu_rubripes
ENSLBEG00000018376	sb:cb81	81	37.838	ENSTRUG00000021229	zgc:162730	84	35.294	Takifugu_rubripes
ENSLBEG00000018376	sb:cb81	76	58.559	ENSTNIG00000019802	sb:cb81	94	57.958	Tetraodon_nigroviridis
ENSLBEG00000018376	sb:cb81	100	37.352	ENSXETG00000016987	zfp36l1	100	33.649	Xenopus_tropicalis
ENSLBEG00000018376	sb:cb81	63	58.929	ENSXETG00000030723	-	54	61.224	Xenopus_tropicalis
ENSLBEG00000018376	sb:cb81	60	47.431	ENSXCOG00000001799	zfp36l1a	62	47.036	Xiphophorus_couchianus
ENSLBEG00000018376	sb:cb81	75	38.202	ENSXCOG00000012791	zgc:162730	67	40.138	Xiphophorus_couchianus
ENSLBEG00000018376	sb:cb81	70	60.251	ENSXCOG00000010688	sb:cb81	99	57.563	Xiphophorus_couchianus
ENSLBEG00000018376	sb:cb81	75	38.202	ENSXMAG00000018206	zgc:162730	67	39.519	Xiphophorus_maculatus
ENSLBEG00000018376	sb:cb81	60	47.431	ENSXMAG00000022234	zfp36l1a	62	47.036	Xiphophorus_maculatus
ENSLBEG00000018376	sb:cb81	100	63.208	ENSXMAG00000004681	sb:cb81	99	59.434	Xiphophorus_maculatus