EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018380 (Gene tree)
Gene ID: 109988487
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: mRNA decay activator protein ZFP36-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6425 bases
Position: chrFKLU01000140.1:693067-699491
Accession: 109988487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000023972	zf-CCCH	PF00642.24	9.5e-21	1	2
ENSLBEP00000023972	zf-CCCH	PF00642.24	9.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025216	-	5764	XM_020639999	ENSLBEP00000023972	423 (aa)	XP_020495655	UPI0009B40DED

Gene Model

Click here to download ENSLBEG00000018380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018380	zgc:162730	56	36.719	ENSLBEG00000018376	sb:cb81	97	34.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018380	zgc:162730	100	77.829	ENSAPOG00000014920	zgc:162730	100	78.291	Acanthochromis_polyacanthus
ENSLBEG00000018380	zgc:162730	57	69.959	ENSACIG00000017366	zgc:162730	96	68.724	Amphilophus_citrinellus
ENSLBEG00000018380	zgc:162730	68	39.159	ENSACIG00000009027	sb:cb81	97	35.333	Amphilophus_citrinellus
ENSLBEG00000018380	zgc:162730	100	78.422	ENSAOCG00000002001	zgc:162730	100	78.886	Amphiprion_ocellaris
ENSLBEG00000018380	zgc:162730	87	33.763	ENSAOCG00000024158	sb:cb81	87	35.696	Amphiprion_ocellaris
ENSLBEG00000018380	zgc:162730	94	79.115	ENSAPEG00000015490	zgc:162730	99	79.607	Amphiprion_percula
ENSLBEG00000018380	zgc:162730	87	32.558	ENSAPEG00000022405	sb:cb81	87	35.696	Amphiprion_percula
ENSLBEG00000018380	zgc:162730	99	35.371	ENSATEG00000003462	sb:cb81	97	34.292	Anabas_testudineus
ENSLBEG00000018380	zgc:162730	100	74.134	ENSATEG00000008790	zgc:162730	100	76.443	Anabas_testudineus
ENSLBEG00000018380	zgc:162730	100	71.963	ENSACLG00000022112	zgc:162730	100	72.430	Astatotilapia_calliptera
ENSLBEG00000018380	zgc:162730	68	37.582	ENSACLG00000013759	sb:cb81	97	35.398	Astatotilapia_calliptera
ENSLBEG00000018380	zgc:162730	69	39.809	ENSAMXG00000034874	sb:cb81	97	36.080	Astyanax_mexicanus
ENSLBEG00000018380	zgc:162730	100	44.860	ENSAMXG00000035945	zgc:162730	99	46.136	Astyanax_mexicanus
ENSLBEG00000018380	zgc:162730	98	70.283	ENSCSEG00000018283	zgc:162730	95	68.880	Cynoglossus_semilaevis
ENSLBEG00000018380	zgc:162730	84	36.483	ENSCSEG00000014426	sb:cb81	83	35.604	Cynoglossus_semilaevis
ENSLBEG00000018380	zgc:162730	100	68.140	ENSCVAG00000018571	zgc:162730	100	67.442	Cyprinodon_variegatus
ENSLBEG00000018380	zgc:162730	83	48.580	ENSDARG00000103720	zgc:162730	89	51.136	Danio_rerio
ENSLBEG00000018380	zgc:162730	60	39.080	ENSDARG00000040503	sb:cb81	97	34.091	Danio_rerio
ENSLBEG00000018380	zgc:162730	100	52.358	ENSELUG00000013158	zgc:162730	100	52.830	Esox_lucius
ENSLBEG00000018380	zgc:162730	99	36.465	ENSELUG00000013045	sb:cb81	97	36.303	Esox_lucius
ENSLBEG00000018380	zgc:162730	100	69.606	ENSFHEG00000013710	zgc:162730	100	68.910	Fundulus_heteroclitus
ENSLBEG00000018380	zgc:162730	65	40.845	ENSFHEG00000022187	sb:cb81	97	35.111	Fundulus_heteroclitus
ENSLBEG00000018380	zgc:162730	79	65.396	ENSGMOG00000017242	zgc:162730	100	66.862	Gadus_morhua
ENSLBEG00000018380	zgc:162730	100	70.070	ENSGAFG00000009953	zgc:162730	100	69.374	Gambusia_affinis
ENSLBEG00000018380	zgc:162730	79	74.561	ENSGACG00000008351	zgc:162730	100	74.854	Gasterosteus_aculeatus
ENSLBEG00000018380	zgc:162730	79	38.596	ENSGACG00000013400	sb:cb81	80	40.956	Gasterosteus_aculeatus
ENSLBEG00000018380	zgc:162730	68	36.928	ENSHBUG00000002383	sb:cb81	97	34.945	Haplochromis_burtoni
ENSLBEG00000018380	zgc:162730	100	72.196	ENSHBUG00000015057	zgc:162730	100	72.664	Haplochromis_burtoni
ENSLBEG00000018380	zgc:162730	100	71.264	ENSHCOG00000015801	zgc:162730	100	71.034	Hippocampus_comes
ENSLBEG00000018380	zgc:162730	65	40.071	ENSIPUG00000023681	ZFP36L1	62	37.857	Ictalurus_punctatus
ENSLBEG00000018380	zgc:162730	100	46.370	ENSIPUG00000018248	zgc:162730	100	47.775	Ictalurus_punctatus
ENSLBEG00000018380	zgc:162730	65	38.596	ENSIPUG00000011378	sb:cb81	73	38.411	Ictalurus_punctatus
ENSLBEG00000018380	zgc:162730	100	70.968	ENSKMAG00000019277	zgc:162730	100	70.507	Kryptolebias_marmoratus
ENSLBEG00000018380	zgc:162730	84	37.270	ENSKMAG00000009884	sb:cb81	97	35.135	Kryptolebias_marmoratus
ENSLBEG00000018380	zgc:162730	99	36.891	ENSLACG00000015732	sb:cb81	97	36.891	Latimeria_chalumnae
ENSLBEG00000018380	zgc:162730	88	38.363	ENSLACG00000015980	-	91	37.922	Latimeria_chalumnae
ENSLBEG00000018380	zgc:162730	99	39.408	ENSLOCG00000014587	sb:cb81	97	40.319	Lepisosteus_oculatus
ENSLBEG00000018380	zgc:162730	100	46.047	ENSLOCG00000014597	zgc:162730	100	46.279	Lepisosteus_oculatus
ENSLBEG00000018380	zgc:162730	100	75.289	ENSMAMG00000007516	zgc:162730	99	77.136	Mastacembelus_armatus
ENSLBEG00000018380	zgc:162730	65	42.308	ENSMAMG00000020144	sb:cb81	62	39.688	Mastacembelus_armatus
ENSLBEG00000018380	zgc:162730	100	64.019	ENSMZEG00005014415	zgc:162730	96	68.724	Maylandia_zebra
ENSLBEG00000018380	zgc:162730	68	37.377	ENSMZEG00005024684	sb:cb81	97	35.477	Maylandia_zebra
ENSLBEG00000018380	zgc:162730	68	38.033	ENSMZEG00005016001	-	97	35.778	Maylandia_zebra
ENSLBEG00000018380	zgc:162730	65	40.288	ENSMMOG00000010073	sb:cb81	66	40.942	Mola_mola
ENSLBEG00000018380	zgc:162730	59	78.088	ENSMMOG00000011506	zgc:162730	99	78.486	Mola_mola
ENSLBEG00000018380	zgc:162730	65	66.667	ENSMALG00000021140	-	96	32.143	Monopterus_albus
ENSLBEG00000018380	zgc:162730	100	72.748	ENSMALG00000002348	zgc:162730	100	73.441	Monopterus_albus
ENSLBEG00000018380	zgc:162730	52	41.304	ENSNBRG00000006231	sb:cb81	97	36.073	Neolamprologus_brichardi
ENSLBEG00000018380	zgc:162730	100	71.963	ENSNBRG00000013701	zgc:162730	100	72.430	Neolamprologus_brichardi
ENSLBEG00000018380	zgc:162730	68	37.785	ENSONIG00000001259	sb:cb81	97	35.111	Oreochromis_niloticus
ENSLBEG00000018380	zgc:162730	83	65.625	ENSONIG00000005003	zgc:162730	100	67.330	Oreochromis_niloticus
ENSLBEG00000018380	zgc:162730	99	57.077	ENSORLG00000027149	zgc:162730	100	58.933	Oryzias_latipes
ENSLBEG00000018380	zgc:162730	99	34.038	ENSORLG00000024026	sb:cb81	63	39.024	Oryzias_latipes
ENSLBEG00000018380	zgc:162730	99	57.077	ENSORLG00020020289	zgc:162730	100	58.933	Oryzias_latipes_hni
ENSLBEG00000018380	zgc:162730	99	33.726	ENSORLG00020021084	sb:cb81	70	39.752	Oryzias_latipes_hni
ENSLBEG00000018380	zgc:162730	99	57.407	ENSORLG00015001519	zgc:162730	100	59.028	Oryzias_latipes_hsok
ENSLBEG00000018380	zgc:162730	99	33.333	ENSORLG00015010105	sb:cb81	73	39.752	Oryzias_latipes_hsok
ENSLBEG00000018380	zgc:162730	99	59.674	ENSOMEG00000017752	zgc:162730	100	61.072	Oryzias_melastigma
ENSLBEG00000018380	zgc:162730	87	37.302	ENSOMEG00000020565	sb:cb81	70	40.514	Oryzias_melastigma
ENSLBEG00000018380	zgc:162730	100	69.374	ENSPFOG00000003665	zgc:162730	100	70.308	Poecilia_formosa
ENSLBEG00000018380	zgc:162730	100	70.766	ENSPLAG00000000946	zgc:162730	100	70.070	Poecilia_latipinna
ENSLBEG00000018380	zgc:162730	100	69.838	ENSPMEG00000000341	zgc:162730	100	70.534	Poecilia_mexicana
ENSLBEG00000018380	zgc:162730	51	42.466	ENSPREG00000017495	sb:cb81	69	39.809	Poecilia_reticulata
ENSLBEG00000018380	zgc:162730	100	70.998	ENSPREG00000021263	zgc:162730	100	70.302	Poecilia_reticulata
ENSLBEG00000018380	zgc:162730	100	71.963	ENSPNYG00000015553	zgc:162730	100	72.430	Pundamilia_nyererei
ENSLBEG00000018380	zgc:162730	52	40.693	ENSPNYG00000007502	sb:cb81	68	39.535	Pundamilia_nyererei
ENSLBEG00000018380	zgc:162730	100	45.305	ENSPNAG00000023018	zgc:162730	100	47.406	Pygocentrus_nattereri
ENSLBEG00000018380	zgc:162730	99	36.682	ENSPNAG00000030063	sb:cb81	97	36.866	Pygocentrus_nattereri
ENSLBEG00000018380	zgc:162730	79	38.914	ENSSFOG00015003179	sb:cb81	97	31.696	Scleropages_formosus
ENSLBEG00000018380	zgc:162730	100	76.267	ENSSMAG00000018612	zgc:162730	100	76.728	Scophthalmus_maximus
ENSLBEG00000018380	zgc:162730	57	38.340	ENSSMAG00000004403	sb:cb81	94	37.500	Scophthalmus_maximus
ENSLBEG00000018380	zgc:162730	83	38.058	ENSSDUG00000004426	sb:cb81	97	35.541	Seriola_dumerili
ENSLBEG00000018380	zgc:162730	100	81.609	ENSSDUG00000002247	zgc:162730	100	81.379	Seriola_dumerili
ENSLBEG00000018380	zgc:162730	100	81.609	ENSSLDG00000008502	zgc:162730	100	81.379	Seriola_lalandi_dorsalis
ENSLBEG00000018380	zgc:162730	83	38.058	ENSSLDG00000018035	sb:cb81	97	35.698	Seriola_lalandi_dorsalis
ENSLBEG00000018380	zgc:162730	50	36.406	ENSSPAG00000013546	sb:cb81	97	35.520	Stegastes_partitus
ENSLBEG00000018380	zgc:162730	100	79.535	ENSSPAG00000006851	zgc:162730	100	79.302	Stegastes_partitus
ENSLBEG00000018380	zgc:162730	64	37.543	ENSTRUG00000022473	zgc:114130	63	36.332	Takifugu_rubripes
ENSLBEG00000018380	zgc:162730	79	34.821	ENSTRUG00000020720	sb:cb81	62	36.996	Takifugu_rubripes
ENSLBEG00000018380	zgc:162730	100	73.944	ENSTRUG00000021229	zgc:162730	100	74.178	Takifugu_rubripes
ENSLBEG00000018380	zgc:162730	96	65.848	ENSTNIG00000000183	zgc:162730	100	68.305	Tetraodon_nigroviridis
ENSLBEG00000018380	zgc:162730	100	69.697	ENSXCOG00000012791	zgc:162730	100	68.998	Xiphophorus_couchianus
ENSLBEG00000018380	zgc:162730	100	70.163	ENSXMAG00000018206	zgc:162730	100	69.464	Xiphophorus_maculatus