EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018509 (Gene tree)
Gene ID: 109976406
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF6-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10409 bases
Position: chrFKLU01004172.1:4745-15153
Accession: 109976406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	1	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	2	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	3	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	4	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	5	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	6	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	7	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	8	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	9	10
ENSLBEP00000024161	zf-C2H2	PF00096.26	2.3e-53	10	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	1	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	2	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	3	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	4	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	5	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	6	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	7	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	8	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	9	10
ENSLBEP00000024154	zf-C2H2	PF00096.26	1.4e-52	10	10
ENSLBEP00000024174	zf-C2H2	PF00096.26	9.3e-44	1	7
ENSLBEP00000024174	zf-C2H2	PF00096.26	9.3e-44	2	7
ENSLBEP00000024174	zf-C2H2	PF00096.26	9.3e-44	3	7
ENSLBEP00000024174	zf-C2H2	PF00096.26	9.3e-44	4	7
ENSLBEP00000024174	zf-C2H2	PF00096.26	9.3e-44	5	7
ENSLBEP00000024174	zf-C2H2	PF00096.26	9.3e-44	6	7
ENSLBEP00000024174	zf-C2H2	PF00096.26	9.3e-44	7	7
ENSLBEP00000024174	zf-met	PF12874.7	2.5e-15	1	3
ENSLBEP00000024174	zf-met	PF12874.7	2.5e-15	2	3
ENSLBEP00000024174	zf-met	PF12874.7	2.5e-15	3	3
ENSLBEP00000024161	zf-met	PF12874.7	1.4e-13	1	2
ENSLBEP00000024161	zf-met	PF12874.7	1.4e-13	2	2
ENSLBEP00000024154	zf-met	PF12874.7	1.6e-12	1	2
ENSLBEP00000024154	zf-met	PF12874.7	1.6e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025428	-	1137	-	ENSLBEP00000024174	378 (aa)	-	-
ENSLBET00000025408	-	3566	XM_020626529	ENSLBEP00000024154	811 (aa)	XP_020482185	-
ENSLBET00000025415	-	3965	XM_020626530	ENSLBEP00000024161	703 (aa)	XP_020482186	UPI0009B4C01C

Gene Model

Click here to download ENSLBEG00000018509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018509	-	96	41.118	ENSLBEG00000002357	-	99	33.876
ENSLBEG00000018509	-	99	39.414	ENSLBEG00000010278	-	96	39.655
ENSLBEG00000018509	-	95	45.977	ENSLBEG00000026457	-	90	45.977
ENSLBEG00000018509	-	90	51.667	ENSLBEG00000006924	-	99	51.667
ENSLBEG00000018509	-	96	41.860	ENSLBEG00000017726	-	85	41.860
ENSLBEG00000018509	-	90	43.972	ENSLBEG00000011289	-	69	37.674
ENSLBEG00000018509	-	93	35.294	ENSLBEG00000025305	-	89	32.189
ENSLBEG00000018509	-	89	42.969	ENSLBEG00000011465	-	89	42.000
ENSLBEG00000018509	-	96	42.152	ENSLBEG00000014211	-	88	44.262
ENSLBEG00000018509	-	97	41.026	ENSLBEG00000024454	-	52	41.026
ENSLBEG00000018509	-	96	38.983	ENSLBEG00000005307	znf236	85	38.983
ENSLBEG00000018509	-	99	37.168	ENSLBEG00000011751	znf526	67	34.211
ENSLBEG00000018509	-	92	40.230	ENSLBEG00000014070	znf384l	54	40.230
ENSLBEG00000018509	-	93	45.968	ENSLBEG00000010165	-	95	37.538
ENSLBEG00000018509	-	86	37.374	ENSLBEG00000006963	-	61	31.707
ENSLBEG00000018509	-	96	31.579	ENSLBEG00000014195	-	52	31.579
ENSLBEG00000018509	-	94	44.048	ENSLBEG00000004867	-	81	40.092
ENSLBEG00000018509	-	98	35.088	ENSLBEG00000008439	znf319b	88	35.088
ENSLBEG00000018509	-	98	41.489	ENSLBEG00000011145	si:cabz01071911.3	80	41.489
ENSLBEG00000018509	-	82	43.000	ENSLBEG00000004805	-	95	40.000
ENSLBEG00000018509	-	89	43.810	ENSLBEG00000024458	-	76	43.810
ENSLBEG00000018509	-	89	39.785	ENSLBEG00000006082	zgc:171929	51	39.785
ENSLBEG00000018509	-	91	39.535	ENSLBEG00000010933	-	59	30.435
ENSLBEG00000018509	-	82	38.723	ENSLBEG00000021260	-	90	38.462
ENSLBEG00000018509	-	93	43.810	ENSLBEG00000007937	-	73	43.333
ENSLBEG00000018509	-	96	33.143	ENSLBEG00000009567	-	76	41.463
ENSLBEG00000018509	-	99	41.967	ENSLBEG00000013570	-	100	41.071
ENSLBEG00000018509	-	96	39.474	ENSLBEG00000005729	znf652	86	34.043
ENSLBEG00000018509	-	89	46.000	ENSLBEG00000016666	znf341	54	38.028
ENSLBEG00000018509	-	90	42.972	ENSLBEG00000007251	-	87	38.194
ENSLBEG00000018509	-	92	41.085	ENSLBEG00000008606	-	97	38.785
ENSLBEG00000018509	-	90	38.235	ENSLBEG00000006161	-	89	36.970
ENSLBEG00000018509	-	94	37.647	ENSLBEG00000024536	-	89	35.065
ENSLBEG00000018509	-	90	33.544	ENSLBEG00000011986	-	89	33.544
ENSLBEG00000018509	-	96	41.797	ENSLBEG00000000369	-	94	41.797
ENSLBEG00000018509	-	88	46.988	ENSLBEG00000008909	-	76	46.988
ENSLBEG00000018509	-	88	45.556	ENSLBEG00000020461	-	50	45.161
ENSLBEG00000018509	-	88	44.720	ENSLBEG00000026552	-	54	39.056
ENSLBEG00000018509	-	91	38.235	ENSLBEG00000017424	-	98	38.235
ENSLBEG00000018509	-	97	35.674	ENSLBEG00000013235	-	84	36.681
ENSLBEG00000018509	-	89	40.523	ENSLBEG00000011250	-	62	39.506
ENSLBEG00000018509	-	94	35.475	ENSLBEG00000024509	-	99	38.056
ENSLBEG00000018509	-	92	43.243	ENSLBEG00000008850	-	52	43.421
ENSLBEG00000018509	-	93	37.415	ENSLBEG00000008320	-	71	36.913
ENSLBEG00000018509	-	94	39.556	ENSLBEG00000007837	-	86	39.556
ENSLBEG00000018509	-	94	40.909	ENSLBEG00000025689	-	67	40.909
ENSLBEG00000018509	-	89	50.000	ENSLBEG00000014282	-	77	50.000
ENSLBEG00000018509	-	89	45.763	ENSLBEG00000001715	-	95	45.763
ENSLBEG00000018509	-	93	46.711	ENSLBEG00000008689	-	86	46.711
ENSLBEG00000018509	-	89	39.881	ENSLBEG00000000393	-	75	39.881
ENSLBEG00000018509	-	98	34.074	ENSLBEG00000000972	snai2	66	39.604
ENSLBEG00000018509	-	93	44.000	ENSLBEG00000024737	-	96	44.000
ENSLBEG00000018509	-	89	36.932	ENSLBEG00000014676	-	58	36.842
ENSLBEG00000018509	-	92	38.411	ENSLBEG00000010132	-	75	38.411
ENSLBEG00000018509	-	99	35.667	ENSLBEG00000009580	-	89	35.000
ENSLBEG00000018509	-	88	36.571	ENSLBEG00000007106	-	95	36.571
ENSLBEG00000018509	-	88	49.057	ENSLBEG00000025139	-	61	49.057
ENSLBEG00000018509	-	89	40.264	ENSLBEG00000028243	-	83	40.264
ENSLBEG00000018509	-	85	38.934	ENSLBEG00000000343	-	78	37.984
ENSLBEG00000018509	-	91	39.493	ENSLBEG00000025696	-	84	36.735
ENSLBEG00000018509	-	95	45.455	ENSLBEG00000002278	-	91	36.190
ENSLBEG00000018509	-	95	50.000	ENSLBEG00000012947	-	97	50.000
ENSLBEG00000018509	-	97	40.171	ENSLBEG00000008115	-	95	41.935
ENSLBEG00000018509	-	98	39.604	ENSLBEG00000015694	-	99	39.456
ENSLBEG00000018509	-	93	33.673	ENSLBEG00000013197	PRDM15	52	33.673
ENSLBEG00000018509	-	99	41.104	ENSLBEG00000006603	gfi1aa	53	41.104
ENSLBEG00000018509	-	90	37.209	ENSLBEG00000012438	ZNF319	97	37.209
ENSLBEG00000018509	-	91	38.095	ENSLBEG00000017407	-	55	32.482
ENSLBEG00000018509	-	88	38.571	ENSLBEG00000026573	-	61	38.571
ENSLBEG00000018509	-	93	36.842	ENSLBEG00000005715	-	78	36.842
ENSLBEG00000018509	-	98	40.123	ENSLBEG00000000435	-	84	38.095
ENSLBEG00000018509	-	98	34.000	ENSLBEG00000016562	znf646	86	32.075
ENSLBEG00000018509	-	92	38.284	ENSLBEG00000011028	-	78	38.284
ENSLBEG00000018509	-	90	35.526	ENSLBEG00000011210	-	56	37.888
ENSLBEG00000018509	-	89	48.438	ENSLBEG00000011588	-	60	48.438
ENSLBEG00000018509	-	89	43.373	ENSLBEG00000026373	e4f1	71	43.373
ENSLBEG00000018509	-	94	40.206	ENSLBEG00000004833	-	89	41.319
ENSLBEG00000018509	-	90	41.034	ENSLBEG00000018970	-	80	41.034
ENSLBEG00000018509	-	91	38.542	ENSLBEG00000011313	-	76	38.542
ENSLBEG00000018509	-	90	40.909	ENSLBEG00000001920	-	96	41.667
ENSLBEG00000018509	-	89	45.833	ENSLBEG00000014263	-	85	46.512
ENSLBEG00000018509	-	89	40.179	ENSLBEG00000017450	-	84	41.176
ENSLBEG00000018509	-	89	49.412	ENSLBEG00000020128	-	95	46.825
ENSLBEG00000018509	-	97	39.521	ENSLBEG00000019067	zbtb47b	83	40.107
ENSLBEG00000018509	-	92	36.364	ENSLBEG00000027993	-	73	36.364
ENSLBEG00000018509	-	91	45.455	ENSLBEG00000022736	prdm5	77	45.455
ENSLBEG00000018509	-	89	42.000	ENSLBEG00000012201	-	61	42.000
ENSLBEG00000018509	-	89	43.359	ENSLBEG00000011349	-	66	43.359
ENSLBEG00000018509	-	91	34.783	ENSLBEG00000012151	zbtb48	51	31.013
ENSLBEG00000018509	-	89	39.000	ENSLBEG00000020747	-	90	39.000
ENSLBEG00000018509	-	94	45.977	ENSLBEG00000009663	-	52	45.545
ENSLBEG00000018509	-	96	39.252	ENSLBEG00000001132	-	97	37.931
ENSLBEG00000018509	-	89	40.642	ENSLBEG00000015264	-	79	40.642
ENSLBEG00000018509	-	91	38.261	ENSLBEG00000023388	-	59	38.261
ENSLBEG00000018509	-	93	41.718	ENSLBEG00000020297	gfi1b	54	41.718
ENSLBEG00000018509	-	99	36.792	ENSLBEG00000020291	si:dkey-89b17.4	78	34.109
ENSLBEG00000018509	-	94	44.554	ENSLBEG00000004892	-	94	41.322
ENSLBEG00000018509	-	99	35.271	ENSLBEG00000028271	-	92	35.472
ENSLBEG00000018509	-	88	38.462	ENSLBEG00000011006	-	50	38.462
ENSLBEG00000018509	-	89	41.549	ENSLBEG00000011040	-	50	41.549
ENSLBEG00000018509	-	89	41.194	ENSLBEG00000000373	-	70	41.194
ENSLBEG00000018509	-	98	39.181	ENSLBEG00000011091	si:cabz01071911.3	96	39.181
ENSLBEG00000018509	-	88	37.681	ENSLBEG00000002594	-	63	37.681
ENSLBEG00000018509	-	95	37.543	ENSLBEG00000001756	-	97	42.647
ENSLBEG00000018509	-	89	51.562	ENSLBEG00000022059	-	79	51.562
ENSLBEG00000018509	-	92	38.528	ENSLBEG00000028628	znf1174	53	38.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018509	-	100	73.314	ENSAPOG00000001563	-	96	73.314	Acanthochromis_polyacanthus
ENSLBEG00000018509	-	93	48.725	ENSACIG00000015411	-	88	60.558	Amphilophus_citrinellus
ENSLBEG00000018509	-	91	82.237	ENSAOCG00000013505	-	94	46.606	Amphiprion_ocellaris
ENSLBEG00000018509	-	89	73.333	ENSAOCG00000013589	-	90	74.894	Amphiprion_ocellaris
ENSLBEG00000018509	-	91	81.579	ENSAPEG00000022756	-	91	47.701	Amphiprion_percula
ENSLBEG00000018509	-	89	71.939	ENSAPEG00000022774	-	88	73.756	Amphiprion_percula
ENSLBEG00000018509	-	89	82.394	ENSATEG00000019261	-	84	80.606	Anabas_testudineus
ENSLBEG00000018509	-	91	79.605	ENSATEG00000019284	-	89	47.550	Anabas_testudineus
ENSLBEG00000018509	-	93	79.054	ENSACLG00000008624	-	89	76.166	Astatotilapia_calliptera
ENSLBEG00000018509	-	91	78.894	ENSACLG00000008606	-	88	78.894	Astatotilapia_calliptera
ENSLBEG00000018509	-	100	71.858	ENSCSEG00000008903	-	99	71.032	Cynoglossus_semilaevis
ENSLBEG00000018509	-	91	77.632	ENSCVAG00000016534	-	50	76.569	Cyprinodon_variegatus
ENSLBEG00000018509	-	92	58.967	ENSGMOG00000000494	-	98	59.887	Gadus_morhua
ENSLBEG00000018509	-	93	72.299	ENSGAFG00000002659	-	90	54.672	Gambusia_affinis
ENSLBEG00000018509	-	92	77.961	ENSGACG00000001377	-	96	77.961	Gasterosteus_aculeatus
ENSLBEG00000018509	-	93	74.359	ENSHBUG00000008502	-	92	74.359	Haplochromis_burtoni
ENSLBEG00000018509	-	92	73.098	ENSHCOG00000000511	-	97	66.250	Hippocampus_comes
ENSLBEG00000018509	-	92	77.686	ENSMAMG00000018137	-	97	54.279	Mastacembelus_armatus
ENSLBEG00000018509	-	93	74.359	ENSMZEG00005002583	-	88	74.359	Maylandia_zebra
ENSLBEG00000018509	-	99	55.116	ENSMMOG00000009733	-	93	60.396	Mola_mola
ENSLBEG00000018509	-	92	53.774	ENSMALG00000019991	-	96	55.455	Monopterus_albus
ENSLBEG00000018509	-	99	79.397	ENSNBRG00000008223	-	92	76.554	Neolamprologus_brichardi
ENSLBEG00000018509	-	92	75.549	ENSONIG00000017233	-	100	77.542	Oreochromis_niloticus
ENSLBEG00000018509	-	99	70.395	ENSOMEG00000016463	-	76	70.395	Oryzias_melastigma
ENSLBEG00000018509	-	90	45.361	ENSPMGG00000002384	-	88	51.923	Periophthalmus_magnuspinnatus
ENSLBEG00000018509	-	100	72.022	ENSPFOG00000006287	-	83	72.022	Poecilia_formosa
ENSLBEG00000018509	-	91	76.230	ENSPLAG00000003412	-	88	46.479	Poecilia_latipinna
ENSLBEG00000018509	-	92	72.022	ENSPMEG00000005897	-	93	54.835	Poecilia_mexicana
ENSLBEG00000018509	-	93	65.922	ENSPREG00000021246	-	98	68.612	Poecilia_reticulata
ENSLBEG00000018509	-	93	76.316	ENSPNYG00000023088	-	92	74.359	Pundamilia_nyererei
ENSLBEG00000018509	-	92	79.006	ENSSDUG00000004892	-	96	59.440	Seriola_dumerili
ENSLBEG00000018509	-	94	73.641	ENSSLDG00000005670	-	94	73.641	Seriola_lalandi_dorsalis
ENSLBEG00000018509	-	89	77.027	ENSSPAG00000022219	-	77	77.027	Stegastes_partitus
ENSLBEG00000018509	-	92	76.522	ENSTNIG00000011188	-	98	76.522	Tetraodon_nigroviridis
ENSLBEG00000018509	-	89	67.568	ENSXCOG00000012645	-	53	67.568	Xiphophorus_couchianus
ENSLBEG00000018509	-	92	72.299	ENSXMAG00000000866	-	84	53.494	Xiphophorus_maculatus