EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018729 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5656 bases
Position: chrFKLU01000041.1:1790347-1796002
Accession: 109982160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000024461	HRDC	PF00570.23	2.4e-13	1	1
ENSLBEP00000024461	DEAD	PF00270.29	1.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025719	-	2877	XM_020631261	ENSLBEP00000024461	846 (aa)	XP_020486917	-

Gene Model

Click here to download ENSLBEG00000018729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018729	blm	67	37.676	ENSLBEG00000023652	recql	80	38.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018729	blm	97	82.509	ENSAPOG00000017966	blm	61	82.509	Acanthochromis_polyacanthus
ENSLBEG00000018729	blm	97	82.524	ENSACIG00000023762	blm	58	82.524	Amphilophus_citrinellus
ENSLBEG00000018729	blm	97	82.509	ENSAOCG00000003318	blm	60	82.509	Amphiprion_ocellaris
ENSLBEG00000018729	blm	97	82.509	ENSAPEG00000018105	blm	59	82.509	Amphiprion_percula
ENSLBEG00000018729	blm	96	84.963	ENSATEG00000006421	blm	60	84.154	Anabas_testudineus
ENSLBEG00000018729	blm	93	61.501	ENSAPLG00000006878	BLM	58	67.098	Anas_platyrhynchos
ENSLBEG00000018729	blm	97	83.293	ENSACLG00000020354	blm	59	83.293	Astatotilapia_calliptera
ENSLBEG00000018729	blm	88	76.147	ENSAMXG00000016970	blm	54	76.147	Astyanax_mexicanus
ENSLBEG00000018729	blm	79	37.723	WBGene00001865	him-6	72	37.723	Caenorhabditis_elegans
ENSLBEG00000018729	blm	61	93.103	ENSCAFG00020016111	BLM	79	69.618	Canis_lupus_dingo
ENSLBEG00000018729	blm	61	93.103	ENSCATG00000040609	BLM	75	76.393	Cercocebus_atys
ENSLBEG00000018729	blm	90	64.175	ENSCPBG00000025000	BLM	65	72.006	Chrysemys_picta_bellii
ENSLBEG00000018729	blm	51	42.956	ENSCING00000021036	-	76	42.956	Ciona_intestinalis
ENSLBEG00000018729	blm	63	40.000	ENSCSAVG00000007521	-	88	40.000	Ciona_savignyi
ENSLBEG00000018729	blm	97	77.033	ENSCSEG00000013483	blm	64	76.196	Cynoglossus_semilaevis
ENSLBEG00000018729	blm	57	82.653	ENSCVAG00000017583	blm	55	82.653	Cyprinodon_variegatus
ENSLBEG00000018729	blm	88	75.328	ENSDARG00000077089	blm	50	79.315	Danio_rerio
ENSLBEG00000018729	blm	80	67.977	ENSDORG00000011033	Blm	66	67.977	Dipodomys_ordii
ENSLBEG00000018729	blm	68	58.834	ENSEBUG00000015743	-	84	58.834	Eptatretus_burgeri
ENSLBEG00000018729	blm	80	66.138	ENSEEUG00000001434	BLM	50	66.138	Erinaceus_europaeus
ENSLBEG00000018729	blm	96	71.429	ENSELUG00000019098	blm	59	71.429	Esox_lucius
ENSLBEG00000018729	blm	83	66.154	ENSFALG00000010981	BLM	54	69.231	Ficedula_albicollis
ENSLBEG00000018729	blm	97	78.110	ENSFHEG00000002553	blm	60	78.469	Fundulus_heteroclitus
ENSLBEG00000018729	blm	96	72.215	ENSGMOG00000016431	blm	83	74.095	Gadus_morhua
ENSLBEG00000018729	blm	53	53.659	ENSGMOG00000010772	-	99	53.659	Gadus_morhua
ENSLBEG00000018729	blm	50	52.778	ENSGMOG00000012988	-	99	52.778	Gadus_morhua
ENSLBEG00000018729	blm	51	50.816	ENSGMOG00000013063	-	99	50.816	Gadus_morhua
ENSLBEG00000018729	blm	51	60.000	ENSGMOG00000010827	-	98	60.000	Gadus_morhua
ENSLBEG00000018729	blm	96	78.762	ENSGAFG00000001117	blm	63	78.365	Gambusia_affinis
ENSLBEG00000018729	blm	96	82.987	ENSGACG00000010863	blm	100	89.015	Gasterosteus_aculeatus
ENSLBEG00000018729	blm	89	62.324	ENSGAGG00000005383	BLM	70	66.813	Gopherus_agassizii
ENSLBEG00000018729	blm	61	93.103	ENSGGOG00000007710	BLM	76	75.570	Gorilla_gorilla
ENSLBEG00000018729	blm	96	83.639	ENSHBUG00000015943	blm	60	83.293	Haplochromis_burtoni
ENSLBEG00000018729	blm	96	75.761	ENSHCOG00000011455	blm	84	75.761	Hippocampus_comes
ENSLBEG00000018729	blm	84	74.756	ENSIPUG00000000529	blm	60	77.219	Ictalurus_punctatus
ENSLBEG00000018729	blm	76	63.060	ENSJJAG00000016322	Blm	60	63.060	Jaculus_jaculus
ENSLBEG00000018729	blm	96	80.411	ENSKMAG00000016608	blm	60	79.736	Kryptolebias_marmoratus
ENSLBEG00000018729	blm	90	69.023	ENSLOCG00000014302	blm	51	73.759	Lepisosteus_oculatus
ENSLBEG00000018729	blm	61	93.103	ENSMFAG00000042982	BLM	75	76.393	Macaca_fascicularis
ENSLBEG00000018729	blm	61	93.103	ENSMMUG00000019526	BLM	75	76.393	Macaca_mulatta
ENSLBEG00000018729	blm	76	71.894	ENSMNEG00000031251	BLM	75	76.066	Macaca_nemestrina
ENSLBEG00000018729	blm	97	82.709	ENSMAMG00000008726	blm	60	82.593	Mastacembelus_armatus
ENSLBEG00000018729	blm	97	83.293	ENSMZEG00005022323	blm	60	83.293	Maylandia_zebra
ENSLBEG00000018729	blm	54	68.053	ENSMGAG00000010473	BLM	78	68.053	Meleagris_gallopavo
ENSLBEG00000018729	blm	97	83.433	ENSMMOG00000006959	blm	60	83.433	Mola_mola
ENSLBEG00000018729	blm	96	83.820	ENSMALG00000007323	blm	60	83.673	Monopterus_albus
ENSLBEG00000018729	blm	80	67.714	ENSNGAG00000001275	Blm	50	67.714	Nannospalax_galili
ENSLBEG00000018729	blm	96	83.516	ENSNBRG00000019702	blm	60	83.172	Neolamprologus_brichardi
ENSLBEG00000018729	blm	61	93.103	ENSNLEG00000012087	BLM	61	66.872	Nomascus_leucogenys
ENSLBEG00000018729	blm	81	62.446	ENSODEG00000015373	BLM	67	62.446	Octodon_degus
ENSLBEG00000018729	blm	96	81.677	ENSONIG00000015193	blm	59	81.354	Oreochromis_niloticus
ENSLBEG00000018729	blm	74	72.684	ENSOANG00000009316	-	81	72.684	Ornithorhynchus_anatinus
ENSLBEG00000018729	blm	97	79.736	ENSORLG00000008110	blm	61	79.736	Oryzias_latipes
ENSLBEG00000018729	blm	97	79.376	ENSORLG00020004812	blm	61	79.257	Oryzias_latipes_hni
ENSLBEG00000018729	blm	97	79.736	ENSORLG00015018640	blm	82	79.557	Oryzias_latipes_hsok
ENSLBEG00000018729	blm	97	79.087	ENSOMEG00000023545	blm	60	79.087	Oryzias_melastigma
ENSLBEG00000018729	blm	61	93.103	ENSPANG00000018572	BLM	75	76.393	Papio_anubis
ENSLBEG00000018729	blm	65	70.856	ENSPSIG00000009792	BLM	98	70.856	Pelodiscus_sinensis
ENSLBEG00000018729	blm	95	74.194	ENSPMGG00000006629	blm	87	73.756	Periophthalmus_magnuspinnatus
ENSLBEG00000018729	blm	75	61.934	ENSPMAG00000000445	blm	86	62.461	Petromyzon_marinus
ENSLBEG00000018729	blm	96	78.277	ENSPFOG00000005059	blm	60	78.365	Poecilia_formosa
ENSLBEG00000018729	blm	98	76.436	ENSPLAG00000017344	blm	62	76.190	Poecilia_latipinna
ENSLBEG00000018729	blm	96	78.277	ENSPMEG00000000321	blm	60	78.365	Poecilia_mexicana
ENSLBEG00000018729	blm	96	78.303	ENSPREG00000007715	blm	60	78.271	Poecilia_reticulata
ENSLBEG00000018729	blm	97	70.979	ENSPNYG00000010956	blm	57	71.256	Pundamilia_nyererei
ENSLBEG00000018729	blm	96	72.118	ENSPNAG00000011714	blm	60	72.118	Pygocentrus_nattereri
ENSLBEG00000018729	blm	61	93.103	ENSRBIG00000029656	BLM	76	75.405	Rhinopithecus_bieti
ENSLBEG00000018729	blm	61	93.103	ENSRROG00000037871	BLM	76	75.405	Rhinopithecus_roxellana
ENSLBEG00000018729	blm	81	67.903	ENSSHAG00000007988	BLM	50	67.903	Sarcophilus_harrisii
ENSLBEG00000018729	blm	91	73.514	ENSSFOG00015015462	blm	55	78.917	Scleropages_formosus
ENSLBEG00000018729	blm	96	82.403	ENSSMAG00000001120	blm	60	82.233	Scophthalmus_maximus
ENSLBEG00000018729	blm	96	83.942	ENSSDUG00000010955	blm	60	83.914	Seriola_dumerili
ENSLBEG00000018729	blm	96	83.758	ENSSLDG00000000634	blm	60	83.433	Seriola_lalandi_dorsalis
ENSLBEG00000018729	blm	91	60.349	ENSSPUG00000000013	BLM	64	64.930	Sphenodon_punctatus
ENSLBEG00000018729	blm	97	83.193	ENSSPAG00000013999	blm	59	83.193	Stegastes_partitus
ENSLBEG00000018729	blm	87	56.782	ENSTGUG00000009959	-	62	59.429	Taeniopygia_guttata
ENSLBEG00000018729	blm	97	78.391	ENSTRUG00000019860	blm	61	78.391	Takifugu_rubripes
ENSLBEG00000018729	blm	96	78.450	ENSTNIG00000019246	blm	61	78.450	Tetraodon_nigroviridis
ENSLBEG00000018729	blm	61	93.103	ENSUMAG00000009105	BLM	85	70.963	Ursus_maritimus
ENSLBEG00000018729	blm	96	74.667	ENSXCOG00000020227	blm	58	74.790	Xiphophorus_couchianus
ENSLBEG00000018729	blm	96	77.455	ENSXMAG00000002951	blm	60	77.551	Xiphophorus_maculatus