EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018812 (Gene tree)
Gene ID: 109976427
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7915 bases
Position: chrFKLU01004188.1:8071-15985
Accession: 109976427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000024587	MMR_HSR1	PF01926.23	2.7e-05	1	1
ENSLBEP00000024602	MMR_HSR1	PF01926.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025851	RAB29-201	1763	XM_020626543	ENSLBEP00000024587	205 (aa)	XP_020482199	UPI0009B467B6
ENSLBET00000025866	RAB29-202	579	-	ENSLBEP00000024602	192 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000018812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018812	RAB29	84	37.654	ENSLBEG00000005128	-	78	36.571
ENSLBEG00000018812	RAB29	98	33.333	ENSLBEG00000003748	rab6a	94	33.333
ENSLBEG00000018812	RAB29	88	31.214	ENSLBEG00000014885	rheb	93	31.319
ENSLBEG00000018812	RAB29	84	37.423	ENSLBEG00000001313	RAB39B	78	35.882
ENSLBEG00000018812	RAB29	98	36.816	ENSLBEG00000020582	rab9a	97	36.816
ENSLBEG00000018812	RAB29	52	41.414	ENSLBEG00000003369	-	82	41.414
ENSLBEG00000018812	RAB29	85	35.119	ENSLBEG00000013176	rab23	76	38.323
ENSLBEG00000018812	RAB29	86	33.533	ENSLBEG00000002367	rab25a	75	33.533
ENSLBEG00000018812	RAB29	82	37.342	ENSLBEG00000004128	rab5c	69	37.342
ENSLBEG00000018812	RAB29	98	34.574	ENSLBEG00000011478	rab9b	84	34.574
ENSLBEG00000018812	RAB29	99	43.689	ENSLBEG00000005018	rab32b	95	43.689
ENSLBEG00000018812	RAB29	97	31.156	ENSLBEG00000019428	rab18b	93	31.156
ENSLBEG00000018812	RAB29	60	30.508	ENSLBEG00000025705	si:ch73-116o1.2	76	30.909
ENSLBEG00000018812	RAB29	79	30.061	ENSLBEG00000016218	rasl11a	60	30.061
ENSLBEG00000018812	RAB29	99	31.863	ENSLBEG00000021040	rab1ba	98	31.863
ENSLBEG00000018812	RAB29	84	38.037	ENSLBEG00000022630	-	79	36.416
ENSLBEG00000018812	RAB29	91	32.000	ENSLBEG00000004172	-	78	32.000
ENSLBEG00000018812	RAB29	82	36.709	ENSLBEG00000010408	-	69	36.709
ENSLBEG00000018812	RAB29	98	32.394	ENSLBEG00000026790	-	96	32.394
ENSLBEG00000018812	RAB29	99	32.843	ENSLBEG00000028426	RAB1A	98	32.843
ENSLBEG00000018812	RAB29	98	31.343	ENSLBEG00000026930	rab6ba	94	31.343
ENSLBEG00000018812	RAB29	80	37.500	ENSLBEG00000018063	-	63	38.217
ENSLBEG00000018812	RAB29	85	32.530	ENSLBEG00000019137	rhebl1	82	32.934
ENSLBEG00000018812	RAB29	99	30.909	ENSLBEG00000002926	si:dkey-34d22.5	97	30.909
ENSLBEG00000018812	RAB29	83	34.783	ENSLBEG00000020796	rab2a	98	31.373
ENSLBEG00000018812	RAB29	84	34.969	ENSLBEG00000027226	-	70	34.118
ENSLBEG00000018812	RAB29	84	35.802	ENSLBEG00000026989	RAB15	78	34.884
ENSLBEG00000018812	RAB29	91	32.000	ENSLBEG00000015248	rab11bb	78	32.000
ENSLBEG00000018812	RAB29	97	30.653	ENSLBEG00000005861	rab18a	91	30.653
ENSLBEG00000018812	RAB29	97	36.406	ENSLBEG00000026777	rab33ba	87	36.406
ENSLBEG00000018812	RAB29	86	39.157	ENSLBEG00000026779	rab13	83	38.012
ENSLBEG00000018812	RAB29	94	35.567	ENSLBEG00000013463	rab15	84	35.567
ENSLBEG00000018812	RAB29	82	32.500	ENSLBEG00000003235	rab22a	78	32.716
ENSLBEG00000018812	RAB29	91	30.286	ENSLBEG00000005981	-	85	30.216
ENSLBEG00000018812	RAB29	90	33.871	ENSLBEG00000008746	RAB41	85	33.871
ENSLBEG00000018812	RAB29	83	32.099	ENSLBEG00000003644	rabl2	67	32.099
ENSLBEG00000018812	RAB29	91	34.659	ENSLBEG00000001193	rab42a	79	34.659
ENSLBEG00000018812	RAB29	83	39.375	ENSLBEG00000007681	si:dkey-16l2.16	97	33.971
ENSLBEG00000018812	RAB29	99	30.660	ENSLBEG00000026857	rab11a	95	30.660
ENSLBEG00000018812	RAB29	85	37.805	ENSLBEG00000013756	rab12	83	35.071
ENSLBEG00000018812	RAB29	98	31.905	ENSLBEG00000019435	rab14	95	31.905
ENSLBEG00000018812	RAB29	100	100.000	ENSLBEG00000006152	-	100	100.000
ENSLBEG00000018812	RAB29	85	30.952	ENSLBEG00000028391	dnajc27	60	30.952
ENSLBEG00000018812	RAB29	96	34.500	ENSLBEG00000025798	zgc:101559	83	34.500
ENSLBEG00000018812	RAB29	87	35.714	ENSLBEG00000027781	rab1ab	80	36.095
ENSLBEG00000018812	RAB29	98	34.158	ENSLBEG00000017798	-	96	34.158
ENSLBEG00000018812	RAB29	58	32.143	ENSLBEG00000019016	arl8bb	57	32.143
ENSLBEG00000018812	RAB29	82	37.975	ENSLBEG00000002516	rab5aa	67	37.975
ENSLBEG00000018812	RAB29	89	36.022	ENSLBEG00000001146	rab30	89	36.022
ENSLBEG00000018812	RAB29	84	35.185	ENSLBEG00000005791	-	76	34.320
ENSLBEG00000018812	RAB29	90	32.184	ENSLBEG00000019372	rab6bb	83	34.807
ENSLBEG00000018812	RAB29	96	32.663	ENSLBEG00000027539	-	86	32.663
ENSLBEG00000018812	RAB29	92	32.203	ENSLBEG00000006087	rab11ba	79	32.203
ENSLBEG00000018812	RAB29	90	34.595	ENSLBEG00000003101	rab4a	83	34.595
ENSLBEG00000018812	RAB29	88	33.728	ENSLBEG00000016446	rab25b	78	33.728
ENSLBEG00000018812	RAB29	88	37.143	ENSLBEG00000014427	rab33a	74	37.143
ENSLBEG00000018812	RAB29	99	34.314	ENSLBEG00000001618	rab35b	98	34.314
ENSLBEG00000018812	RAB29	71	30.147	ENSLBEG00000022310	arl8ba	59	30.147
ENSLBEG00000018812	RAB29	98	34.158	ENSLBEG00000001796	RAB7A	96	34.158
ENSLBEG00000018812	RAB29	82	36.905	ENSLBEG00000018180	si:dkey-13a21.4	82	36.905
ENSLBEG00000018812	RAB29	92	32.768	ENSLBEG00000016417	rab11al	80	32.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018812	RAB29	100	82.524	ENSATEG00000024739	RAB29	100	82.524	Anabas_testudineus
ENSLBEG00000018812	RAB29	85	86.503	ENSACLG00000008602	RAB29	100	86.061	Astatotilapia_calliptera
ENSLBEG00000018812	RAB29	100	74.146	ENSCVAG00000014038	RAB29	99	74.146	Cyprinodon_variegatus
ENSLBEG00000018812	RAB29	98	53.465	ENSEBUG00000002259	RAB29	96	53.465	Eptatretus_burgeri
ENSLBEG00000018812	RAB29	84	77.778	ENSFHEG00000015993	RAB29	96	67.857	Fundulus_heteroclitus
ENSLBEG00000018812	RAB29	85	79.878	ENSGMOG00000018475	RAB29	99	79.878	Gadus_morhua
ENSLBEG00000018812	RAB29	100	73.786	ENSGAFG00000000629	RAB29	100	73.786	Gambusia_affinis
ENSLBEG00000018812	RAB29	100	78.049	ENSGACG00000010473	RAB29	99	78.049	Gasterosteus_aculeatus
ENSLBEG00000018812	RAB29	100	78.744	ENSHBUG00000012594	RAB29	99	78.744	Haplochromis_burtoni
ENSLBEG00000018812	RAB29	99	70.443	ENSKMAG00000017150	-	91	70.443	Kryptolebias_marmoratus
ENSLBEG00000018812	RAB29	99	55.610	ENSLACG00000002523	RAB29	98	55.610	Latimeria_chalumnae
ENSLBEG00000018812	RAB29	100	78.537	ENSMAMG00000006963	RAB29	100	78.537	Mastacembelus_armatus
ENSLBEG00000018812	RAB29	100	77.778	ENSMZEG00005026799	RAB29	99	77.778	Maylandia_zebra
ENSLBEG00000018812	RAB29	100	80.583	ENSMALG00000018436	RAB29	90	80.583	Monopterus_albus
ENSLBEG00000018812	RAB29	85	86.503	ENSNBRG00000008714	RAB29	71	86.957	Neolamprologus_brichardi
ENSLBEG00000018812	RAB29	100	77.404	ENSONIG00000014892	RAB29	100	77.404	Oreochromis_niloticus
ENSLBEG00000018812	RAB29	100	75.122	ENSORLG00000027892	RAB29	99	75.122	Oryzias_latipes
ENSLBEG00000018812	RAB29	100	73.171	ENSORLG00020005240	RAB29	99	73.171	Oryzias_latipes_hni
ENSLBEG00000018812	RAB29	100	74.146	ENSORLG00015020441	-	99	74.146	Oryzias_latipes_hsok
ENSLBEG00000018812	RAB29	100	75.122	ENSOMEG00000000336	RAB29	100	75.122	Oryzias_melastigma
ENSLBEG00000018812	RAB29	100	69.268	ENSPMGG00000008290	-	100	69.268	Periophthalmus_magnuspinnatus
ENSLBEG00000018812	RAB29	100	67.961	ENSPFOG00000013066	RAB29	99	67.961	Poecilia_formosa
ENSLBEG00000018812	RAB29	99	67.980	ENSPLAG00000002600	RAB29	95	67.980	Poecilia_latipinna
ENSLBEG00000018812	RAB29	100	68.932	ENSPMEG00000021807	RAB29	100	68.932	Poecilia_mexicana
ENSLBEG00000018812	RAB29	100	69.903	ENSPREG00000020276	RAB29	100	69.903	Poecilia_reticulata
ENSLBEG00000018812	RAB29	100	77.778	ENSPNYG00000015355	RAB29	99	77.778	Pundamilia_nyererei
ENSLBEG00000018812	RAB29	100	79.227	ENSSDUG00000006543	RAB29	100	79.227	Seriola_dumerili
ENSLBEG00000018812	RAB29	99	55.665	ENSSPUG00000015007	RAB29	98	55.665	Sphenodon_punctatus
ENSLBEG00000018812	RAB29	100	76.214	ENSSPAG00000002062	RAB29	100	76.214	Stegastes_partitus
ENSLBEG00000018812	RAB29	100	71.359	ENSXCOG00000016370	RAB29	100	71.359	Xiphophorus_couchianus
ENSLBEG00000018812	RAB29	100	72.330	ENSXMAG00000029823	RAB29	100	72.330	Xiphophorus_maculatus