EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000018831 (Gene tree)
Gene ID: 109998257
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4603 bases
Position: chrFKLU01000012.1:2670273-2674875
Accession: 109998257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000024608	tRNA_Me_trans	PF03054.16	2.5e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025872	-	2560	XM_020653041	ENSLBEP00000024608	416 (aa)	XP_020508697	UPI0009B403A6

Gene Model

Click here to download ENSLBEG00000018831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018831	trmu	99	68.765	ENSG00000100416	TRMU	96	76.101	Homo_sapiens
ENSLBEG00000018831	trmu	100	87.290	ENSAPOG00000014458	trmu	100	87.290	Acanthochromis_polyacanthus
ENSLBEG00000018831	trmu	96	69.576	ENSAMEG00000003319	TRMU	96	69.576	Ailuropoda_melanoleuca
ENSLBEG00000018831	trmu	100	85.337	ENSACIG00000002101	trmu	100	85.337	Amphilophus_citrinellus
ENSLBEG00000018831	trmu	100	88.010	ENSAOCG00000013155	trmu	100	88.010	Amphiprion_ocellaris
ENSLBEG00000018831	trmu	100	87.770	ENSAPEG00000013350	trmu	100	87.770	Amphiprion_percula
ENSLBEG00000018831	trmu	100	84.375	ENSATEG00000007814	trmu	100	84.375	Anabas_testudineus
ENSLBEG00000018831	trmu	94	69.152	ENSAPLG00000016380	TRMU	99	69.152	Anas_platyrhynchos
ENSLBEG00000018831	trmu	99	69.734	ENSACAG00000007720	TRMU	99	69.734	Anolis_carolinensis
ENSLBEG00000018831	trmu	99	69.249	ENSANAG00000038053	TRMU	98	69.249	Aotus_nancymaae
ENSLBEG00000018831	trmu	100	86.058	ENSACLG00000005395	trmu	100	86.058	Astatotilapia_calliptera
ENSLBEG00000018831	trmu	98	76.773	ENSAMXG00000005282	trmu	99	76.773	Astyanax_mexicanus
ENSLBEG00000018831	trmu	99	68.447	ENSBTAG00000005595	TRMU	99	68.447	Bos_taurus
ENSLBEG00000018831	trmu	92	42.199	WBGene00007114	mttu-1	98	42.199	Caenorhabditis_elegans
ENSLBEG00000018831	trmu	99	67.554	ENSCJAG00000000198	TRMU	98	67.554	Callithrix_jacchus
ENSLBEG00000018831	trmu	97	69.136	ENSCAFG00000000779	TRMU	95	69.136	Canis_familiaris
ENSLBEG00000018831	trmu	97	69.136	ENSCAFG00020009184	TRMU	95	69.136	Canis_lupus_dingo
ENSLBEG00000018831	trmu	100	67.703	ENSCHIG00000017074	TRMU	100	67.703	Capra_hircus
ENSLBEG00000018831	trmu	97	69.877	ENSTSYG00000003853	TRMU	96	69.877	Carlito_syrichta
ENSLBEG00000018831	trmu	94	65.526	ENSCAPG00000013034	TRMU	96	65.526	Cavia_aperea
ENSLBEG00000018831	trmu	97	69.479	ENSCPOG00000020780	TRMU	96	69.479	Cavia_porcellus
ENSLBEG00000018831	trmu	99	68.039	ENSCCAG00000021641	TRMU	98	68.039	Cebus_capucinus
ENSLBEG00000018831	trmu	96	69.925	ENSCATG00000032800	TRMU	95	69.925	Cercocebus_atys
ENSLBEG00000018831	trmu	98	69.608	ENSCLAG00000017269	TRMU	97	69.608	Chinchilla_lanigera
ENSLBEG00000018831	trmu	96	69.925	ENSCSAG00000005279	TRMU	95	69.925	Chlorocebus_sabaeus
ENSLBEG00000018831	trmu	89	70.699	ENSCPBG00000011621	TRMU	93	70.699	Chrysemys_picta_bellii
ENSLBEG00000018831	trmu	95	46.717	ENSCING00000019371	-	97	46.717	Ciona_intestinalis
ENSLBEG00000018831	trmu	96	69.925	ENSCANG00000041645	TRMU	95	69.925	Colobus_angolensis_palliatus
ENSLBEG00000018831	trmu	97	68.395	ENSCGRG00001001739	Trmu	97	68.395	Cricetulus_griseus_chok1gshd
ENSLBEG00000018831	trmu	97	63.210	ENSCGRG00000002781	Trmu	97	63.210	Cricetulus_griseus_crigri
ENSLBEG00000018831	trmu	99	79.710	ENSCSEG00000012382	trmu	99	79.710	Cynoglossus_semilaevis
ENSLBEG00000018831	trmu	100	84.856	ENSCVAG00000001366	trmu	100	84.856	Cyprinodon_variegatus
ENSLBEG00000018831	trmu	100	76.202	ENSDARG00000043734	trmu	100	76.202	Danio_rerio
ENSLBEG00000018831	trmu	62	56.371	ENSDNOG00000047245	-	91	56.371	Dasypus_novemcinctus
ENSLBEG00000018831	trmu	96	70.927	ENSDORG00000007455	Trmu	97	70.927	Dipodomys_ordii
ENSLBEG00000018831	trmu	93	44.819	FBgn0040337	CG3021	95	44.819	Drosophila_melanogaster
ENSLBEG00000018831	trmu	93	58.312	ENSEBUG00000007454	trmu	99	56.812	Eptatretus_burgeri
ENSLBEG00000018831	trmu	97	69.877	ENSEASG00005021725	TRMU	96	69.877	Equus_asinus_asinus
ENSLBEG00000018831	trmu	97	69.877	ENSECAG00000000467	TRMU	96	69.877	Equus_caballus
ENSLBEG00000018831	trmu	69	53.147	ENSEEUG00000000074	-	68	53.147	Erinaceus_europaeus
ENSLBEG00000018831	trmu	100	79.137	ENSELUG00000009464	trmu	99	80.978	Esox_lucius
ENSLBEG00000018831	trmu	96	70.677	ENSFCAG00000006533	TRMU	95	70.677	Felis_catus
ENSLBEG00000018831	trmu	94	67.758	ENSFALG00000010035	TRMU	100	67.758	Ficedula_albicollis
ENSLBEG00000018831	trmu	91	67.895	ENSFDAG00000017472	TRMU	97	67.895	Fukomys_damarensis
ENSLBEG00000018831	trmu	100	84.135	ENSFHEG00000003162	trmu	100	84.135	Fundulus_heteroclitus
ENSLBEG00000018831	trmu	97	73.219	ENSGMOG00000001323	trmu	100	73.219	Gadus_morhua
ENSLBEG00000018831	trmu	99	69.048	ENSGALG00000031922	TRMU	99	69.048	Gallus_gallus
ENSLBEG00000018831	trmu	98	85.330	ENSGAFG00000013331	trmu	98	85.330	Gambusia_affinis
ENSLBEG00000018831	trmu	100	84.634	ENSGACG00000019024	trmu	100	84.634	Gasterosteus_aculeatus
ENSLBEG00000018831	trmu	99	68.765	ENSGGOG00000000203	TRMU	98	68.765	Gorilla_gorilla
ENSLBEG00000018831	trmu	100	85.577	ENSHBUG00000023421	trmu	100	85.577	Haplochromis_burtoni
ENSLBEG00000018831	trmu	97	68.657	ENSHGLG00000009278	TRMU	95	68.657	Heterocephalus_glaber_female
ENSLBEG00000018831	trmu	97	68.657	ENSHGLG00100018863	TRMU	95	68.657	Heterocephalus_glaber_male
ENSLBEG00000018831	trmu	99	83.614	ENSHCOG00000013459	trmu	99	83.614	Hippocampus_comes
ENSLBEG00000018831	trmu	100	78.365	ENSIPUG00000009785	trmu	100	78.365	Ictalurus_punctatus
ENSLBEG00000018831	trmu	99	67.788	ENSSTOG00000010993	TRMU	99	67.788	Ictidomys_tridecemlineatus
ENSLBEG00000018831	trmu	99	67.386	ENSJJAG00000000667	Trmu	100	67.386	Jaculus_jaculus
ENSLBEG00000018831	trmu	100	83.413	ENSKMAG00000008516	trmu	100	83.413	Kryptolebias_marmoratus
ENSLBEG00000018831	trmu	99	73.317	ENSLACG00000013713	TRMU	99	73.317	Latimeria_chalumnae
ENSLBEG00000018831	trmu	96	78.000	ENSLOCG00000016066	trmu	96	78.000	Lepisosteus_oculatus
ENSLBEG00000018831	trmu	99	60.628	ENSLAFG00000005129	TRMU	99	60.628	Loxodonta_africana
ENSLBEG00000018831	trmu	96	70.175	ENSMFAG00000039767	TRMU	95	70.175	Macaca_fascicularis
ENSLBEG00000018831	trmu	96	70.175	ENSMMUG00000000807	TRMU	95	70.175	Macaca_mulatta
ENSLBEG00000018831	trmu	96	70.175	ENSMNEG00000028164	TRMU	95	70.175	Macaca_nemestrina
ENSLBEG00000018831	trmu	96	69.925	ENSMLEG00000033884	TRMU	95	69.925	Mandrillus_leucophaeus
ENSLBEG00000018831	trmu	100	85.096	ENSMAMG00000004717	trmu	100	85.096	Mastacembelus_armatus
ENSLBEG00000018831	trmu	100	86.058	ENSMZEG00005015797	trmu	100	86.058	Maylandia_zebra
ENSLBEG00000018831	trmu	81	67.347	ENSMGAG00000007550	TRMU	100	67.347	Meleagris_gallopavo
ENSLBEG00000018831	trmu	96	68.672	ENSMAUG00000022282	Trmu	96	68.672	Mesocricetus_auratus
ENSLBEG00000018831	trmu	96	69.674	ENSMICG00000029046	TRMU	97	69.674	Microcebus_murinus
ENSLBEG00000018831	trmu	96	69.173	ENSMOCG00000014641	Trmu	96	69.173	Microtus_ochrogaster
ENSLBEG00000018831	trmu	100	81.490	ENSMMOG00000007229	trmu	100	81.490	Mola_mola
ENSLBEG00000018831	trmu	98	65.049	ENSMODG00000007433	TRMU	96	65.049	Monodelphis_domestica
ENSLBEG00000018831	trmu	100	83.894	ENSMALG00000007721	trmu	100	83.894	Monopterus_albus
ENSLBEG00000018831	trmu	97	68.642	MGP_CAROLIEiJ_G0020134	Trmu	97	68.642	Mus_caroli
ENSLBEG00000018831	trmu	97	68.889	ENSMUSG00000022386	Trmu	97	68.889	Mus_musculus
ENSLBEG00000018831	trmu	97	68.642	MGP_PahariEiJ_G0020139	Trmu	97	68.642	Mus_pahari
ENSLBEG00000018831	trmu	97	68.889	MGP_SPRETEiJ_G0021031	Trmu	97	68.889	Mus_spretus
ENSLBEG00000018831	trmu	97	69.383	ENSMPUG00000002523	TRMU	96	69.383	Mustela_putorius_furo
ENSLBEG00000018831	trmu	99	67.874	ENSNGAG00000005132	Trmu	99	67.874	Nannospalax_galili
ENSLBEG00000018831	trmu	100	86.058	ENSNBRG00000022690	trmu	100	86.058	Neolamprologus_brichardi
ENSLBEG00000018831	trmu	99	68.765	ENSNLEG00000015773	TRMU	98	68.765	Nomascus_leucogenys
ENSLBEG00000018831	trmu	79	58.537	ENSMEUG00000000216	TRMU	99	58.537	Notamacropus_eugenii
ENSLBEG00000018831	trmu	97	69.975	ENSODEG00000014745	TRMU	97	69.630	Octodon_degus
ENSLBEG00000018831	trmu	100	85.817	ENSONIG00000009821	trmu	100	85.817	Oreochromis_niloticus
ENSLBEG00000018831	trmu	93	66.154	ENSOANG00000001891	TRMU	99	66.154	Ornithorhynchus_anatinus
ENSLBEG00000018831	trmu	91	69.841	ENSOCUG00000003664	TRMU	96	67.830	Oryctolagus_cuniculus
ENSLBEG00000018831	trmu	99	79.759	ENSORLG00000019015	trmu	99	79.759	Oryzias_latipes
ENSLBEG00000018831	trmu	99	80.241	ENSORLG00020006830	trmu	99	80.241	Oryzias_latipes_hni
ENSLBEG00000018831	trmu	99	80.241	ENSORLG00015003907	trmu	99	80.241	Oryzias_latipes_hsok
ENSLBEG00000018831	trmu	56	86.580	ENSOMEG00000015541	trmu	83	86.580	Oryzias_melastigma
ENSLBEG00000018831	trmu	97	68.642	ENSOGAG00000008096	TRMU	97	68.642	Otolemur_garnettii
ENSLBEG00000018831	trmu	100	64.029	ENSOARG00000019475	TRMU	100	64.029	Ovis_aries
ENSLBEG00000018831	trmu	99	68.523	ENSPPAG00000033944	TRMU	98	68.523	Pan_paniscus
ENSLBEG00000018831	trmu	96	70.677	ENSPPRG00000004197	TRMU	95	70.677	Panthera_pardus
ENSLBEG00000018831	trmu	67	72.563	ENSPTIG00000014122	TRMU	97	74.242	Panthera_tigris_altaica
ENSLBEG00000018831	trmu	99	68.523	ENSPTRG00000014510	TRMU	98	68.523	Pan_troglodytes
ENSLBEG00000018831	trmu	95	70.127	ENSPANG00000023074	TRMU	97	67.671	Papio_anubis
ENSLBEG00000018831	trmu	100	75.721	ENSPKIG00000002849	trmu	100	75.721	Paramormyrops_kingsleyae
ENSLBEG00000018831	trmu	92	68.668	ENSPSIG00000013020	TRMU	100	68.668	Pelodiscus_sinensis
ENSLBEG00000018831	trmu	100	82.692	ENSPMGG00000004083	trmu	100	82.692	Periophthalmus_magnuspinnatus
ENSLBEG00000018831	trmu	100	67.548	ENSPEMG00000014007	Trmu	98	67.548	Peromyscus_maniculatus_bairdii
ENSLBEG00000018831	trmu	96	65.250	ENSPCIG00000009923	TRMU	95	65.347	Phascolarctos_cinereus
ENSLBEG00000018831	trmu	96	81.841	ENSPFOG00000008197	trmu	90	81.841	Poecilia_formosa
ENSLBEG00000018831	trmu	99	83.816	ENSPLAG00000008414	trmu	99	83.816	Poecilia_latipinna
ENSLBEG00000018831	trmu	100	83.894	ENSPMEG00000004326	trmu	100	83.894	Poecilia_mexicana
ENSLBEG00000018831	trmu	99	83.855	ENSPREG00000007980	trmu	99	83.855	Poecilia_reticulata
ENSLBEG00000018831	trmu	99	68.765	ENSPPYG00000011949	TRMU	98	68.765	Pongo_abelii
ENSLBEG00000018831	trmu	93	62.371	ENSPCAG00000013462	TRMU	99	62.371	Procavia_capensis
ENSLBEG00000018831	trmu	97	68.642	ENSPCOG00000016539	TRMU	97	68.642	Propithecus_coquereli
ENSLBEG00000018831	trmu	97	63.951	ENSPVAG00000013202	TRMU	97	63.951	Pteropus_vampyrus
ENSLBEG00000018831	trmu	100	85.577	ENSPNYG00000005629	trmu	100	85.577	Pundamilia_nyererei
ENSLBEG00000018831	trmu	99	78.345	ENSPNAG00000006339	trmu	96	78.345	Pygocentrus_nattereri
ENSLBEG00000018831	trmu	97	67.901	ENSRNOG00000016465	Trmu	97	67.901	Rattus_norvegicus
ENSLBEG00000018831	trmu	96	69.173	ENSRBIG00000038973	TRMU	95	69.173	Rhinopithecus_bieti
ENSLBEG00000018831	trmu	96	69.424	ENSRROG00000004267	TRMU	95	69.424	Rhinopithecus_roxellana
ENSLBEG00000018831	trmu	92	32.927	YDL033C	SLM3	93	32.927	Saccharomyces_cerevisiae
ENSLBEG00000018831	trmu	97	69.727	ENSSBOG00000030184	TRMU	96	69.727	Saimiri_boliviensis_boliviensis
ENSLBEG00000018831	trmu	91	74.934	ENSSFOG00015020664	trmu	99	74.934	Scleropages_formosus
ENSLBEG00000018831	trmu	100	84.615	ENSSMAG00000019450	trmu	100	84.615	Scophthalmus_maximus
ENSLBEG00000018831	trmu	100	87.019	ENSSDUG00000011913	trmu	100	87.019	Seriola_dumerili
ENSLBEG00000018831	trmu	100	87.019	ENSSLDG00000011684	trmu	100	87.019	Seriola_lalandi_dorsalis
ENSLBEG00000018831	trmu	99	58.454	ENSSPUG00000017123	TRMU	98	58.454	Sphenodon_punctatus
ENSLBEG00000018831	trmu	100	85.337	ENSSPAG00000021875	trmu	100	85.337	Stegastes_partitus
ENSLBEG00000018831	trmu	97	68.889	ENSSSCG00000000007	TRMU	96	68.889	Sus_scrofa
ENSLBEG00000018831	trmu	89	70.509	ENSTGUG00000003663	-	100	70.509	Taeniopygia_guttata
ENSLBEG00000018831	trmu	99	85.472	ENSTRUG00000001231	trmu	100	85.472	Takifugu_rubripes
ENSLBEG00000018831	trmu	99	84.173	ENSTNIG00000010484	trmu	98	84.173	Tetraodon_nigroviridis
ENSLBEG00000018831	trmu	72	54.622	ENSTBEG00000011276	-	77	54.622	Tupaia_belangeri
ENSLBEG00000018831	trmu	95	71.392	ENSTTRG00000004160	TRMU	94	71.392	Tursiops_truncatus
ENSLBEG00000018831	trmu	71	72.542	ENSUAMG00000024825	TRMU	98	72.542	Ursus_americanus
ENSLBEG00000018831	trmu	95	59.698	ENSUMAG00000019079	TRMU	97	73.541	Ursus_maritimus
ENSLBEG00000018831	trmu	53	63.470	ENSVPAG00000000685	-	100	63.470	Vicugna_pacos
ENSLBEG00000018831	trmu	97	68.395	ENSVVUG00000024963	TRMU	96	68.395	Vulpes_vulpes
ENSLBEG00000018831	trmu	97	73.399	ENSXETG00000023304	trmu	95	73.399	Xenopus_tropicalis
ENSLBEG00000018831	trmu	99	82.536	ENSXCOG00000015105	trmu	99	82.536	Xiphophorus_couchianus
ENSLBEG00000018831	trmu	99	84.819	ENSXMAG00000006697	trmu	99	84.819	Xiphophorus_maculatus