EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000018878 (Gene tree)
Gene ID: 109989169
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 18943 bases
Position: chrFKLU01000154.1:139350-158292
Accession: 109989169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000024698	RRM_1	PF00076.22	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000025962	-	4477	XM_020640820	ENSLBEP00000024698	250 (aa)	XP_020496476	UPI0009B3A3A1

Gene Model

Click here to download ENSLBEG00000018878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000018878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000018878	rbm38	62	68.750	ENSLBEG00000000774	rbm24b	100	55.378
ENSLBEG00000018878	rbm38	98	63.745	ENSLBEG00000016163	RBM38	100	64.062
ENSLBEG00000018878	rbm38	70	34.483	ENSLBEG00000000569	dazap1	79	34.091
ENSLBEG00000018878	rbm38	54	75.556	ENSLBEG00000003025	rbm24a	100	55.466

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000018878	rbm38	91	58.369	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSLBEG00000018878	rbm38	100	92.400	ENSAPOG00000003301	rbm38	100	92.400	Acanthochromis_polyacanthus
ENSLBEG00000018878	rbm38	98	65.098	ENSAPOG00000009939	-	100	66.270	Acanthochromis_polyacanthus
ENSLBEG00000018878	rbm38	100	89.200	ENSACIG00000000010	rbm38	100	89.200	Amphilophus_citrinellus
ENSLBEG00000018878	rbm38	98	64.683	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSLBEG00000018878	rbm38	95	65.417	ENSAOCG00000012559	RBM38	98	66.667	Amphiprion_ocellaris
ENSLBEG00000018878	rbm38	100	92.800	ENSAOCG00000013497	-	100	92.800	Amphiprion_ocellaris
ENSLBEG00000018878	rbm38	100	92.800	ENSAPEG00000013137	rbm38	100	92.800	Amphiprion_percula
ENSLBEG00000018878	rbm38	98	64.286	ENSAPEG00000023581	-	100	65.476	Amphiprion_percula
ENSLBEG00000018878	rbm38	98	62.698	ENSATEG00000016710	-	100	63.529	Anabas_testudineus
ENSLBEG00000018878	rbm38	100	89.200	ENSATEG00000016366	rbm38	100	89.200	Anabas_testudineus
ENSLBEG00000018878	rbm38	93	56.723	ENSACAG00000016238	RBM38	90	56.723	Anolis_carolinensis
ENSLBEG00000018878	rbm38	91	58.798	ENSANAG00000031959	RBM38	81	85.859	Aotus_nancymaae
ENSLBEG00000018878	rbm38	98	63.889	ENSACLG00000019514	-	100	63.889	Astatotilapia_calliptera
ENSLBEG00000018878	rbm38	98	62.000	ENSAMXG00000015601	-	100	62.000	Astyanax_mexicanus
ENSLBEG00000018878	rbm38	95	55.882	ENSAMXG00000038120	rbm38	96	55.882	Astyanax_mexicanus
ENSLBEG00000018878	rbm38	91	58.798	ENSBTAG00000008105	RBM38	89	58.798	Bos_taurus
ENSLBEG00000018878	rbm38	58	56.849	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSLBEG00000018878	rbm38	91	57.940	ENSCJAG00000019139	RBM38	81	85.859	Callithrix_jacchus
ENSLBEG00000018878	rbm38	91	58.369	ENSCAFG00020021943	RBM38	89	58.369	Canis_lupus_dingo
ENSLBEG00000018878	rbm38	91	57.940	ENSCHIG00000002609	RBM38	89	57.940	Capra_hircus
ENSLBEG00000018878	rbm38	91	59.227	ENSCPOG00000012781	RBM38	89	59.227	Cavia_porcellus
ENSLBEG00000018878	rbm38	91	57.940	ENSCCAG00000036872	RBM38	81	85.859	Cebus_capucinus
ENSLBEG00000018878	rbm38	91	59.227	ENSCATG00000032133	RBM38	81	85.859	Cercocebus_atys
ENSLBEG00000018878	rbm38	91	58.798	ENSCLAG00000005906	RBM38	92	58.798	Chinchilla_lanigera
ENSLBEG00000018878	rbm38	91	59.227	ENSCSAG00000015503	RBM38	89	59.227	Chlorocebus_sabaeus
ENSLBEG00000018878	rbm38	93	55.882	ENSCPBG00000024059	RBM38	100	55.882	Chrysemys_picta_bellii
ENSLBEG00000018878	rbm38	60	60.897	ENSCING00000025102	-	66	60.897	Ciona_intestinalis
ENSLBEG00000018878	rbm38	61	59.509	ENSCSAVG00000001132	-	58	59.509	Ciona_savignyi
ENSLBEG00000018878	rbm38	94	46.610	ENSCANG00000030105	-	80	46.610	Colobus_angolensis_palliatus
ENSLBEG00000018878	rbm38	72	65.574	ENSCGRG00001012928	Rbm38	89	58.369	Cricetulus_griseus_chok1gshd
ENSLBEG00000018878	rbm38	98	62.353	ENSCSEG00000004701	-	100	63.137	Cynoglossus_semilaevis
ENSLBEG00000018878	rbm38	84	70.335	ENSCSEG00000020943	rbm38	68	70.335	Cynoglossus_semilaevis
ENSLBEG00000018878	rbm38	98	62.302	ENSCVAG00000005472	-	100	63.095	Cyprinodon_variegatus
ENSLBEG00000018878	rbm38	100	82.800	ENSCVAG00000015952	rbm38	100	82.800	Cyprinodon_variegatus
ENSLBEG00000018878	rbm38	98	62.249	ENSDARG00000058818	rbm38	100	62.249	Danio_rerio
ENSLBEG00000018878	rbm38	91	56.710	ENSDNOG00000032004	RBM38	98	56.710	Dasypus_novemcinctus
ENSLBEG00000018878	rbm38	91	58.369	ENSECAG00000007700	RBM38	89	58.369	Equus_caballus
ENSLBEG00000018878	rbm38	91	57.511	ENSEEUG00000013489	RBM38	89	58.369	Erinaceus_europaeus
ENSLBEG00000018878	rbm38	92	70.435	ENSELUG00000000585	-	100	70.435	Esox_lucius
ENSLBEG00000018878	rbm38	98	63.529	ENSELUG00000005849	-	100	63.529	Esox_lucius
ENSLBEG00000018878	rbm38	91	57.940	ENSFCAG00000042916	RBM38	81	84.848	Felis_catus
ENSLBEG00000018878	rbm38	70	68.927	ENSFALG00000010805	RBM38	90	68.927	Ficedula_albicollis
ENSLBEG00000018878	rbm38	98	61.753	ENSFHEG00000006160	-	100	61.328	Fundulus_heteroclitus
ENSLBEG00000018878	rbm38	100	84.462	ENSFHEG00000017748	rbm38	100	84.462	Fundulus_heteroclitus
ENSLBEG00000018878	rbm38	75	69.110	ENSGMOG00000016655	-	100	71.728	Gadus_morhua
ENSLBEG00000018878	rbm38	93	56.540	ENSGALG00000026081	RBM38	100	57.563	Gallus_gallus
ENSLBEG00000018878	rbm38	93	80.687	ENSGACG00000015224	rbm38	100	80.687	Gasterosteus_aculeatus
ENSLBEG00000018878	rbm38	93	63.713	ENSGACG00000009873	-	100	63.713	Gasterosteus_aculeatus
ENSLBEG00000018878	rbm38	93	55.882	ENSGAGG00000001187	RBM38	100	55.882	Gopherus_agassizii
ENSLBEG00000018878	rbm38	100	88.800	ENSHBUG00000012058	rbm38	100	88.800	Haplochromis_burtoni
ENSLBEG00000018878	rbm38	98	63.889	ENSHBUG00000011778	-	100	63.889	Haplochromis_burtoni
ENSLBEG00000018878	rbm38	91	58.798	ENSHGLG00000015077	RBM38	89	58.798	Heterocephalus_glaber_female
ENSLBEG00000018878	rbm38	86	66.667	ENSHCOG00000005622	-	60	66.667	Hippocampus_comes
ENSLBEG00000018878	rbm38	100	62.151	ENSHCOG00000019040	rbm38	100	62.151	Hippocampus_comes
ENSLBEG00000018878	rbm38	98	60.400	ENSIPUG00000019349	-	100	60.400	Ictalurus_punctatus
ENSLBEG00000018878	rbm38	91	73.191	ENSKMAG00000012402	rbm38	99	73.191	Kryptolebias_marmoratus
ENSLBEG00000018878	rbm38	98	64.113	ENSLOCG00000003456	rbm38	100	64.113	Lepisosteus_oculatus
ENSLBEG00000018878	rbm38	91	59.227	ENSMFAG00000043808	RBM38	81	85.859	Macaca_fascicularis
ENSLBEG00000018878	rbm38	91	59.227	ENSMMUG00000031391	RBM38	81	85.859	Macaca_mulatta
ENSLBEG00000018878	rbm38	91	59.227	ENSMNEG00000034683	RBM38	81	85.859	Macaca_nemestrina
ENSLBEG00000018878	rbm38	100	91.200	ENSMAMG00000024135	rbm38	100	91.200	Mastacembelus_armatus
ENSLBEG00000018878	rbm38	98	65.600	ENSMAMG00000020499	RBM38	100	64.961	Mastacembelus_armatus
ENSLBEG00000018878	rbm38	98	63.889	ENSMZEG00005000849	-	100	63.889	Maylandia_zebra
ENSLBEG00000018878	rbm38	100	88.800	ENSMZEG00005026036	rbm38	100	88.800	Maylandia_zebra
ENSLBEG00000018878	rbm38	72	66.120	ENSMAUG00000021211	Rbm38	89	59.227	Mesocricetus_auratus
ENSLBEG00000018878	rbm38	91	57.940	ENSMICG00000038011	RBM38	98	57.940	Microcebus_murinus
ENSLBEG00000018878	rbm38	72	66.120	ENSMOCG00000008715	Rbm38	89	59.227	Microtus_ochrogaster
ENSLBEG00000018878	rbm38	98	64.286	ENSMMOG00000020051	-	100	64.706	Mola_mola
ENSLBEG00000018878	rbm38	95	56.198	ENSMODG00000016458	RBM38	94	57.025	Monodelphis_domestica
ENSLBEG00000018878	rbm38	100	76.000	ENSMALG00000022327	rbm38	100	76.800	Monopterus_albus
ENSLBEG00000018878	rbm38	75	73.684	ENSMALG00000004680	RBM38	81	66.972	Monopterus_albus
ENSLBEG00000018878	rbm38	91	58.369	MGP_CAROLIEiJ_G0024745	Rbm38	89	58.369	Mus_caroli
ENSLBEG00000018878	rbm38	91	58.369	ENSMUSG00000027510	Rbm38	89	58.369	Mus_musculus
ENSLBEG00000018878	rbm38	91	58.369	MGP_PahariEiJ_G0026186	Rbm38	89	58.369	Mus_pahari
ENSLBEG00000018878	rbm38	91	58.369	MGP_SPRETEiJ_G0025665	Rbm38	89	58.369	Mus_spretus
ENSLBEG00000018878	rbm38	74	64.894	ENSMPUG00000006518	RBM38	95	63.265	Mustela_putorius_furo
ENSLBEG00000018878	rbm38	91	57.940	ENSMLUG00000011140	RBM38	98	57.940	Myotis_lucifugus
ENSLBEG00000018878	rbm38	100	88.400	ENSNBRG00000022685	rbm38	100	88.400	Neolamprologus_brichardi
ENSLBEG00000018878	rbm38	98	63.889	ENSNBRG00000022545	-	100	63.095	Neolamprologus_brichardi
ENSLBEG00000018878	rbm38	91	59.657	ENSODEG00000007980	RBM38	89	59.657	Octodon_degus
ENSLBEG00000018878	rbm38	98	63.745	ENSONIG00000020324	-	100	62.948	Oreochromis_niloticus
ENSLBEG00000018878	rbm38	98	89.388	ENSONIG00000017073	rbm38	100	89.388	Oreochromis_niloticus
ENSLBEG00000018878	rbm38	77	61.224	ENSOANG00000009259	RBM38	74	62.245	Ornithorhynchus_anatinus
ENSLBEG00000018878	rbm38	98	62.205	ENSORLG00000027180	-	100	62.598	Oryzias_latipes
ENSLBEG00000018878	rbm38	100	80.876	ENSORLG00000012154	rbm38	100	80.876	Oryzias_latipes
ENSLBEG00000018878	rbm38	100	81.673	ENSORLG00020017871	rbm38	100	81.673	Oryzias_latipes_hni
ENSLBEG00000018878	rbm38	100	61.628	ENSORLG00020020751	-	100	62.598	Oryzias_latipes_hni
ENSLBEG00000018878	rbm38	100	81.673	ENSORLG00015012606	rbm38	100	81.673	Oryzias_latipes_hsok
ENSLBEG00000018878	rbm38	98	62.846	ENSORLG00015017040	-	100	62.500	Oryzias_latipes_hsok
ENSLBEG00000018878	rbm38	100	81.673	ENSOMEG00000006805	rbm38	100	81.673	Oryzias_melastigma
ENSLBEG00000018878	rbm38	98	62.698	ENSOMEG00000023912	-	100	63.492	Oryzias_melastigma
ENSLBEG00000018878	rbm38	91	58.798	ENSOGAG00000029136	RBM38	88	58.798	Otolemur_garnettii
ENSLBEG00000018878	rbm38	91	57.940	ENSPPRG00000009507	RBM38	81	84.848	Panthera_pardus
ENSLBEG00000018878	rbm38	77	63.776	ENSPTRG00000013661	RBM38	81	85.859	Pan_troglodytes
ENSLBEG00000018878	rbm38	52	78.295	ENSPTRG00000045845	-	70	78.295	Pan_troglodytes
ENSLBEG00000018878	rbm38	91	59.227	ENSPANG00000020919	-	81	85.859	Papio_anubis
ENSLBEG00000018878	rbm38	95	47.325	ENSPANG00000033127	-	93	47.325	Papio_anubis
ENSLBEG00000018878	rbm38	98	59.921	ENSPKIG00000025417	rbm38	100	60.392	Paramormyrops_kingsleyae
ENSLBEG00000018878	rbm38	98	59.600	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSLBEG00000018878	rbm38	93	55.932	ENSPSIG00000011649	RBM38	92	55.932	Pelodiscus_sinensis
ENSLBEG00000018878	rbm38	98	61.417	ENSPMGG00000017094	-	100	61.417	Periophthalmus_magnuspinnatus
ENSLBEG00000018878	rbm38	98	79.184	ENSPMGG00000011343	rbm38	98	82.041	Periophthalmus_magnuspinnatus
ENSLBEG00000018878	rbm38	95	55.785	ENSPCIG00000013648	RBM38	94	55.785	Phascolarctos_cinereus
ENSLBEG00000018878	rbm38	100	84.646	ENSPFOG00000011658	rbm38	100	84.646	Poecilia_formosa
ENSLBEG00000018878	rbm38	98	61.753	ENSPLAG00000002500	-	100	61.753	Poecilia_latipinna
ENSLBEG00000018878	rbm38	100	84.252	ENSPLAG00000005218	rbm38	100	84.252	Poecilia_latipinna
ENSLBEG00000018878	rbm38	100	84.252	ENSPMEG00000015770	rbm38	100	84.252	Poecilia_mexicana
ENSLBEG00000018878	rbm38	100	84.252	ENSPREG00000007398	rbm38	100	84.252	Poecilia_reticulata
ENSLBEG00000018878	rbm38	91	58.369	ENSPCOG00000026201	RBM38	84	83.495	Propithecus_coquereli
ENSLBEG00000018878	rbm38	75	40.314	ENSPVAG00000006457	RBM38	92	38.589	Pteropus_vampyrus
ENSLBEG00000018878	rbm38	100	88.400	ENSPNYG00000021373	rbm38	100	88.400	Pundamilia_nyererei
ENSLBEG00000018878	rbm38	98	63.889	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSLBEG00000018878	rbm38	98	62.800	ENSPNAG00000015123	-	91	82.203	Pygocentrus_nattereri
ENSLBEG00000018878	rbm38	95	61.925	ENSPNAG00000010596	rbm38	96	61.925	Pygocentrus_nattereri
ENSLBEG00000018878	rbm38	91	59.227	ENSRNOG00000006420	Rbm38	89	59.227	Rattus_norvegicus
ENSLBEG00000018878	rbm38	93	51.489	ENSRROG00000036388	-	89	51.489	Rhinopithecus_roxellana
ENSLBEG00000018878	rbm38	91	57.940	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSLBEG00000018878	rbm38	98	57.600	ENSSFOG00015004453	rbm38	100	61.600	Scleropages_formosus
ENSLBEG00000018878	rbm38	98	64.286	ENSSDUG00000021082	RBM38	100	65.098	Seriola_dumerili
ENSLBEG00000018878	rbm38	100	92.800	ENSSDUG00000022611	rbm38	100	92.800	Seriola_dumerili
ENSLBEG00000018878	rbm38	98	64.286	ENSSLDG00000011778	RBM38	100	65.098	Seriola_lalandi_dorsalis
ENSLBEG00000018878	rbm38	100	92.800	ENSSLDG00000010845	rbm38	100	92.800	Seriola_lalandi_dorsalis
ENSLBEG00000018878	rbm38	98	64.683	ENSSPAG00000020989	RBM38	100	65.873	Stegastes_partitus
ENSLBEG00000018878	rbm38	100	92.800	ENSSPAG00000011113	rbm38	100	92.800	Stegastes_partitus
ENSLBEG00000018878	rbm38	91	58.798	ENSSSCG00000007504	RBM38	89	58.798	Sus_scrofa
ENSLBEG00000018878	rbm38	100	85.200	ENSTRUG00000024954	rbm38	100	85.600	Takifugu_rubripes
ENSLBEG00000018878	rbm38	98	63.492	ENSTRUG00000019869	-	100	63.492	Takifugu_rubripes
ENSLBEG00000018878	rbm38	93	68.067	ENSTNIG00000007093	-	100	68.067	Tetraodon_nigroviridis
ENSLBEG00000018878	rbm38	91	58.369	ENSUAMG00000019780	RBM38	89	58.798	Ursus_americanus
ENSLBEG00000018878	rbm38	91	58.369	ENSVVUG00000017246	RBM38	89	58.369	Vulpes_vulpes
ENSLBEG00000018878	rbm38	77	61.538	ENSXETG00000011268	rbm38	99	56.017	Xenopus_tropicalis
ENSLBEG00000018878	rbm38	52	75.735	ENSXCOG00000017324	-	62	75.735	Xiphophorus_couchianus
ENSLBEG00000018878	rbm38	100	85.600	ENSXMAG00000023662	rbm38	100	85.600	Xiphophorus_maculatus