EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000019122 (Gene tree)
Gene ID: 109998838
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6461 bases
Position: chrFKLU01000513.1:283076-289536
Accession: 109998838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000025027	TruB_N	PF01509.18	6.6e-22	1	1
ENSLBEP00000025027	PUA	PF01472.20	3.5e-16	1	1
ENSLBEP00000025027	DKCLD	PF08068.12	8.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000026297	-	1471	XM_020653741	ENSLBEP00000025027	487 (aa)	XP_020509397	-

Gene Model

Click here to download ENSLBEG00000019122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019122's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019122	dkc1	92	78.879	ENSG00000130826	DKC1	99	87.317	Homo_sapiens
ENSLBEG00000019122	dkc1	92	91.333	ENSAPOG00000007799	dkc1	84	92.308	Acanthochromis_polyacanthus
ENSLBEG00000019122	dkc1	90	79.780	ENSAMEG00000002776	DKC1	85	81.860	Ailuropoda_melanoleuca
ENSLBEG00000019122	dkc1	89	90.023	ENSACIG00000022614	dkc1	86	90.187	Amphilophus_citrinellus
ENSLBEG00000019122	dkc1	92	91.333	ENSAOCG00000013159	dkc1	86	90.164	Amphiprion_ocellaris
ENSLBEG00000019122	dkc1	92	91.333	ENSAPEG00000002284	dkc1	87	92.019	Amphiprion_percula
ENSLBEG00000019122	dkc1	90	87.162	ENSATEG00000013682	dkc1	85	87.385	Anabas_testudineus
ENSLBEG00000019122	dkc1	89	80.631	ENSACAG00000015600	DKC1	76	81.777	Anolis_carolinensis
ENSLBEG00000019122	dkc1	92	79.095	ENSANAG00000022732	DKC1	85	80.866	Aotus_nancymaae
ENSLBEG00000019122	dkc1	94	87.118	ENSACLG00000015605	dkc1	80	94.162	Astatotilapia_calliptera
ENSLBEG00000019122	dkc1	93	86.593	ENSAMXG00000017108	dkc1	84	88.318	Astyanax_mexicanus
ENSLBEG00000019122	dkc1	92	78.233	ENSBTAG00000013045	DKC1	86	80.137	Bos_taurus
ENSLBEG00000019122	dkc1	84	63.747	WBGene00010478	K01G5.5	97	61.574	Caenorhabditis_elegans
ENSLBEG00000019122	dkc1	92	79.050	ENSCJAG00000004210	DKC1	85	80.822	Callithrix_jacchus
ENSLBEG00000019122	dkc1	91	70.203	ENSCAFG00000009311	-	79	75.312	Canis_familiaris
ENSLBEG00000019122	dkc1	94	77.802	ENSCAFG00000019620	-	78	85.037	Canis_familiaris
ENSLBEG00000019122	dkc1	81	75.505	ENSCAFG00020009379	-	75	75.443	Canis_lupus_dingo
ENSLBEG00000019122	dkc1	94	77.802	ENSCAFG00020008918	-	78	85.037	Canis_lupus_dingo
ENSLBEG00000019122	dkc1	92	78.233	ENSCHIG00000017392	DKC1	86	80.137	Capra_hircus
ENSLBEG00000019122	dkc1	88	78.936	ENSTSYG00000007681	DKC1	85	78.842	Carlito_syrichta
ENSLBEG00000019122	dkc1	82	80.590	ENSCAPG00000003342	DKC1	92	80.941	Cavia_aperea
ENSLBEG00000019122	dkc1	89	79.910	ENSCPOG00000008825	DKC1	85	80.182	Cavia_porcellus
ENSLBEG00000019122	dkc1	92	70.043	ENSCCAG00000027418	DKC1	84	71.298	Cebus_capucinus
ENSLBEG00000019122	dkc1	92	78.448	ENSCATG00000033602	DKC1	85	80.182	Cercocebus_atys
ENSLBEG00000019122	dkc1	88	81.279	ENSCLAG00000000720	DKC1	86	81.567	Chinchilla_lanigera
ENSLBEG00000019122	dkc1	92	78.448	ENSCSAG00000006706	DKC1	85	80.182	Chlorocebus_sabaeus
ENSLBEG00000019122	dkc1	91	79.464	ENSCPBG00000005858	DKC1	86	86.035	Chrysemys_picta_bellii
ENSLBEG00000019122	dkc1	81	80.759	ENSCING00000004599	-	83	76.027	Ciona_intestinalis
ENSLBEG00000019122	dkc1	84	77.885	ENSCSAVG00000010047	-	94	76.611	Ciona_savignyi
ENSLBEG00000019122	dkc1	92	78.448	ENSCANG00000027987	DKC1	85	80.182	Colobus_angolensis_palliatus
ENSLBEG00000019122	dkc1	80	65.553	ENSCGRG00001016789	-	79	66.848	Cricetulus_griseus_chok1gshd
ENSLBEG00000019122	dkc1	89	79.910	ENSCGRG00001014574	-	85	80.182	Cricetulus_griseus_chok1gshd
ENSLBEG00000019122	dkc1	80	65.553	ENSCGRG00000014809	-	77	66.848	Cricetulus_griseus_crigri
ENSLBEG00000019122	dkc1	89	79.910	ENSCGRG00000016075	-	85	80.182	Cricetulus_griseus_crigri
ENSLBEG00000019122	dkc1	95	86.296	ENSCSEG00000012633	dkc1	89	87.500	Cynoglossus_semilaevis
ENSLBEG00000019122	dkc1	90	88.558	ENSCVAG00000010155	dkc1	83	90.398	Cyprinodon_variegatus
ENSLBEG00000019122	dkc1	89	88.710	ENSDARG00000016484	dkc1	83	89.362	Danio_rerio
ENSLBEG00000019122	dkc1	98	76.782	ENSDNOG00000004218	DKC1	85	80.866	Dasypus_novemcinctus
ENSLBEG00000019122	dkc1	61	70.000	ENSDORG00000013566	-	90	72.364	Dipodomys_ordii
ENSLBEG00000019122	dkc1	93	68.053	FBgn0259937	Nop60B	88	70.352	Drosophila_melanogaster
ENSLBEG00000019122	dkc1	89	77.427	ENSETEG00000016095	DKC1	89	77.677	Echinops_telfairi
ENSLBEG00000019122	dkc1	69	76.190	ENSEBUG00000015962	dkc1	98	81.100	Eptatretus_burgeri
ENSLBEG00000019122	dkc1	92	77.004	ENSEASG00005007484	DKC1	86	78.619	Equus_asinus_asinus
ENSLBEG00000019122	dkc1	95	77.516	ENSECAG00000023524	DKC1	86	78.619	Equus_caballus
ENSLBEG00000019122	dkc1	84	82.100	ENSEEUG00000003323	DKC1	99	82.100	Erinaceus_europaeus
ENSLBEG00000019122	dkc1	93	88.621	ENSELUG00000014538	dkc1	85	90.972	Esox_lucius
ENSLBEG00000019122	dkc1	91	78.742	ENSFCAG00000006577	DKC1	85	80.505	Felis_catus
ENSLBEG00000019122	dkc1	87	81.093	ENSFALG00000011496	DKC1	92	77.593	Ficedula_albicollis
ENSLBEG00000019122	dkc1	88	81.019	ENSFDAG00000002516	DKC1	85	81.308	Fukomys_damarensis
ENSLBEG00000019122	dkc1	92	89.310	ENSFHEG00000004627	dkc1	85	90.164	Fundulus_heteroclitus
ENSLBEG00000019122	dkc1	80	90.537	ENSGMOG00000017277	dkc1	100	90.537	Gadus_morhua
ENSLBEG00000019122	dkc1	91	81.153	ENSGALG00000005054	DKC1	84	82.407	Gallus_gallus
ENSLBEG00000019122	dkc1	89	90.531	ENSGAFG00000011486	dkc1	78	90.110	Gambusia_affinis
ENSLBEG00000019122	dkc1	84	93.902	ENSGACG00000004373	dkc1	96	95.137	Gasterosteus_aculeatus
ENSLBEG00000019122	dkc1	88	82.028	ENSGAGG00000011330	DKC1	84	82.028	Gopherus_agassizii
ENSLBEG00000019122	dkc1	92	78.879	ENSGGOG00000001045	DKC1	85	80.638	Gorilla_gorilla
ENSLBEG00000019122	dkc1	97	90.084	ENSHBUG00000012436	dkc1	90	91.091	Haplochromis_burtoni
ENSLBEG00000019122	dkc1	86	83.019	ENSHGLG00000000649	DKC1	84	79.587	Heterocephalus_glaber_female
ENSLBEG00000019122	dkc1	83	84.864	ENSHGLG00100001153	DKC1	85	79.587	Heterocephalus_glaber_male
ENSLBEG00000019122	dkc1	97	86.345	ENSHCOG00000021099	dkc1	85	90.187	Hippocampus_comes
ENSLBEG00000019122	dkc1	92	85.996	ENSIPUG00000010309	dkc1	84	87.356	Ictalurus_punctatus
ENSLBEG00000019122	dkc1	92	77.849	ENSSTOG00000001074	-	90	79.545	Ictidomys_tridecemlineatus
ENSLBEG00000019122	dkc1	92	67.811	ENSSTOG00000011904	-	81	69.161	Ictidomys_tridecemlineatus
ENSLBEG00000019122	dkc1	92	72.185	ENSSTOG00000020149	-	84	73.893	Ictidomys_tridecemlineatus
ENSLBEG00000019122	dkc1	57	72.563	ENSJJAG00000010086	-	91	72.364	Jaculus_jaculus
ENSLBEG00000019122	dkc1	92	87.333	ENSKMAG00000008010	dkc1	86	88.318	Kryptolebias_marmoratus
ENSLBEG00000019122	dkc1	92	81.375	ENSLACG00000014025	DKC1	90	87.310	Latimeria_chalumnae
ENSLBEG00000019122	dkc1	92	86.784	ENSLOCG00000013713	dkc1	88	89.362	Lepisosteus_oculatus
ENSLBEG00000019122	dkc1	89	79.458	ENSLAFG00000000221	DKC1	85	79.954	Loxodonta_africana
ENSLBEG00000019122	dkc1	92	78.664	ENSMFAG00000032398	DKC1	73	80.410	Macaca_fascicularis
ENSLBEG00000019122	dkc1	92	78.448	ENSMMUG00000005768	DKC1	85	80.182	Macaca_mulatta
ENSLBEG00000019122	dkc1	92	78.448	ENSMNEG00000034503	DKC1	85	80.182	Macaca_nemestrina
ENSLBEG00000019122	dkc1	92	78.448	ENSMLEG00000034422	DKC1	85	80.182	Mandrillus_leucophaeus
ENSLBEG00000019122	dkc1	84	92.647	ENSMAMG00000005427	dkc1	89	93.233	Mastacembelus_armatus
ENSLBEG00000019122	dkc1	97	90.295	ENSMZEG00005014503	dkc1	90	91.314	Maylandia_zebra
ENSLBEG00000019122	dkc1	78	84.872	ENSMGAG00000009238	DKC1	87	83.750	Meleagris_gallopavo
ENSLBEG00000019122	dkc1	61	69.333	ENSMAUG00000016454	-	90	71.636	Mesocricetus_auratus
ENSLBEG00000019122	dkc1	92	77.948	ENSMICG00000038751	-	86	79.677	Microcebus_murinus
ENSLBEG00000019122	dkc1	81	72.861	ENSMICG00000002818	-	99	75.824	Microcebus_murinus
ENSLBEG00000019122	dkc1	61	67.000	ENSMOCG00000001169	-	90	69.091	Microtus_ochrogaster
ENSLBEG00000019122	dkc1	84	93.154	ENSMMOG00000020348	dkc1	86	94.162	Mola_mola
ENSLBEG00000019122	dkc1	82	85.750	ENSMODG00000009243	DKC1	70	85.750	Monodelphis_domestica
ENSLBEG00000019122	dkc1	89	90.762	ENSMALG00000009454	dkc1	84	90.824	Monopterus_albus
ENSLBEG00000019122	dkc1	92	68.230	MGP_CAROLIEiJ_G0033191	Dkc1	84	83.065	Mus_caroli
ENSLBEG00000019122	dkc1	86	83.255	ENSMUSG00000031403	Dkc1	78	85.714	Mus_musculus
ENSLBEG00000019122	dkc1	86	82.783	MGP_PahariEiJ_G0031735	Dkc1	78	85.000	Mus_pahari
ENSLBEG00000019122	dkc1	86	83.255	MGP_SPRETEiJ_G0034351	Dkc1	78	85.714	Mus_spretus
ENSLBEG00000019122	dkc1	91	80.135	ENSMPUG00000016136	DKC1	77	83.173	Mustela_putorius_furo
ENSLBEG00000019122	dkc1	89	76.169	ENSMLUG00000011918	DKC1	77	82.294	Myotis_lucifugus
ENSLBEG00000019122	dkc1	61	70.569	ENSNGAG00000015724	-	91	72.364	Nannospalax_galili
ENSLBEG00000019122	dkc1	82	94.710	ENSNBRG00000005638	dkc1	80	94.670	Neolamprologus_brichardi
ENSLBEG00000019122	dkc1	92	78.664	ENSNLEG00000014323	DKC1	85	80.410	Nomascus_leucogenys
ENSLBEG00000019122	dkc1	83	81.481	ENSMEUG00000001066	DKC1	88	82.045	Notamacropus_eugenii
ENSLBEG00000019122	dkc1	71	79.023	ENSOPRG00000005248	DKC1	69	79.191	Ochotona_princeps
ENSLBEG00000019122	dkc1	83	86.420	ENSODEG00000011816	-	85	81.839	Octodon_degus
ENSLBEG00000019122	dkc1	61	70.000	ENSODEG00000000549	-	90	72.000	Octodon_degus
ENSLBEG00000019122	dkc1	92	91.759	ENSONIG00000013889	dkc1	89	91.759	Oreochromis_niloticus
ENSLBEG00000019122	dkc1	58	62.046	ENSOANG00000022295	-	84	62.171	Ornithorhynchus_anatinus
ENSLBEG00000019122	dkc1	86	82.558	ENSOANG00000008713	-	88	82.558	Ornithorhynchus_anatinus
ENSLBEG00000019122	dkc1	92	78.017	ENSOCUG00000012646	DKC1	86	80.182	Oryctolagus_cuniculus
ENSLBEG00000019122	dkc1	93	85.088	ENSORLG00000018748	dkc1	84	86.417	Oryzias_latipes
ENSLBEG00000019122	dkc1	91	86.652	ENSOMEG00000005786	dkc1	81	89.451	Oryzias_melastigma
ENSLBEG00000019122	dkc1	92	77.215	ENSOGAG00000003399	DKC1	86	78.842	Otolemur_garnettii
ENSLBEG00000019122	dkc1	89	79.910	ENSOARG00000003047	DKC1	86	80.365	Ovis_aries
ENSLBEG00000019122	dkc1	92	79.095	ENSPPAG00000023820	DKC1	85	80.866	Pan_paniscus
ENSLBEG00000019122	dkc1	91	78.742	ENSPPRG00000009104	DKC1	85	80.505	Panthera_pardus
ENSLBEG00000019122	dkc1	88	81.542	ENSPTIG00000017469	DKC1	85	81.840	Panthera_tigris_altaica
ENSLBEG00000019122	dkc1	92	78.879	ENSPTRG00000043416	-	74	80.638	Pan_troglodytes
ENSLBEG00000019122	dkc1	92	78.879	ENSPTRG00000022449	DKC1	85	80.638	Pan_troglodytes
ENSLBEG00000019122	dkc1	92	78.448	ENSPANG00000011978	DKC1	85	80.182	Papio_anubis
ENSLBEG00000019122	dkc1	92	86.504	ENSPKIG00000008443	dkc1	91	86.079	Paramormyrops_kingsleyae
ENSLBEG00000019122	dkc1	74	88.827	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSLBEG00000019122	dkc1	81	87.374	ENSPMGG00000004097	dkc1	72	87.563	Periophthalmus_magnuspinnatus
ENSLBEG00000019122	dkc1	71	84.000	ENSPEMG00000013348	Dkc1	82	84.118	Peromyscus_maniculatus_bairdii
ENSLBEG00000019122	dkc1	83	85.185	ENSPCIG00000016706	DKC1	68	85.786	Phascolarctos_cinereus
ENSLBEG00000019122	dkc1	93	88.962	ENSPFOG00000018653	dkc1	91	90.330	Poecilia_formosa
ENSLBEG00000019122	dkc1	93	88.962	ENSPLAG00000003272	dkc1	82	90.330	Poecilia_latipinna
ENSLBEG00000019122	dkc1	93	88.742	ENSPMEG00000010413	dkc1	91	90.110	Poecilia_mexicana
ENSLBEG00000019122	dkc1	93	88.962	ENSPREG00000004100	dkc1	89	88.621	Poecilia_reticulata
ENSLBEG00000019122	dkc1	89	80.361	ENSPPYG00000020892	DKC1	86	80.638	Pongo_abelii
ENSLBEG00000019122	dkc1	77	86.327	ENSPCAG00000015034	DKC1	73	86.327	Procavia_capensis
ENSLBEG00000019122	dkc1	92	78.017	ENSPCOG00000026874	DKC1	85	79.954	Propithecus_coquereli
ENSLBEG00000019122	dkc1	89	80.742	ENSPVAG00000009222	DKC1	85	81.030	Pteropus_vampyrus
ENSLBEG00000019122	dkc1	88	88.235	ENSPNYG00000020063	dkc1	87	88.182	Pundamilia_nyererei
ENSLBEG00000019122	dkc1	93	84.314	ENSPNAG00000005780	dkc1	85	87.150	Pygocentrus_nattereri
ENSLBEG00000019122	dkc1	89	75.676	ENSRNOG00000055562	Dkc1	86	76.136	Rattus_norvegicus
ENSLBEG00000019122	dkc1	92	78.448	ENSRBIG00000028457	DKC1	73	80.182	Rhinopithecus_bieti
ENSLBEG00000019122	dkc1	92	78.448	ENSRROG00000044780	DKC1	85	80.182	Rhinopithecus_roxellana
ENSLBEG00000019122	dkc1	81	68.274	YLR175W	-	87	66.110	Saccharomyces_cerevisiae
ENSLBEG00000019122	dkc1	92	78.879	ENSSBOG00000033746	DKC1	85	80.638	Saimiri_boliviensis_boliviensis
ENSLBEG00000019122	dkc1	87	82.176	ENSSHAG00000002463	DKC1	92	81.755	Sarcophilus_harrisii
ENSLBEG00000019122	dkc1	95	83.191	ENSSFOG00015009585	dkc1	88	85.235	Scleropages_formosus
ENSLBEG00000019122	dkc1	92	89.087	ENSSMAG00000002552	dkc1	84	90.421	Scophthalmus_maximus
ENSLBEG00000019122	dkc1	99	89.375	ENSSDUG00000009963	dkc1	89	91.091	Seriola_dumerili
ENSLBEG00000019122	dkc1	88	89.486	ENSSLDG00000019342	dkc1	86	89.252	Seriola_lalandi_dorsalis
ENSLBEG00000019122	dkc1	88	76.082	ENSSARG00000001822	DKC1	87	76.092	Sorex_araneus
ENSLBEG00000019122	dkc1	94	76.033	ENSSPUG00000018907	DKC1	92	75.770	Sphenodon_punctatus
ENSLBEG00000019122	dkc1	89	90.023	ENSSPAG00000002585	dkc1	81	90.421	Stegastes_partitus
ENSLBEG00000019122	dkc1	82	85.464	ENSSSCG00000012823	DKC1	84	84.406	Sus_scrofa
ENSLBEG00000019122	dkc1	79	86.822	ENSTGUG00000006781	DKC1	88	83.416	Taeniopygia_guttata
ENSLBEG00000019122	dkc1	89	89.791	ENSTRUG00000004413	dkc1	86	90.187	Takifugu_rubripes
ENSLBEG00000019122	dkc1	93	70.259	ENSTNIG00000002582	dkc1	86	71.655	Tetraodon_nigroviridis
ENSLBEG00000019122	dkc1	57	84.783	ENSTBEG00000011262	DKC1	85	78.641	Tupaia_belangeri
ENSLBEG00000019122	dkc1	57	85.921	ENSTTRG00000008089	DKC1	55	85.921	Tursiops_truncatus
ENSLBEG00000019122	dkc1	92	79.372	ENSUAMG00000022721	DKC1	87	83.413	Ursus_americanus
ENSLBEG00000019122	dkc1	92	78.924	ENSUMAG00000016899	DKC1	97	83.375	Ursus_maritimus
ENSLBEG00000019122	dkc1	83	83.252	ENSVVUG00000020734	-	70	83.578	Vulpes_vulpes
ENSLBEG00000019122	dkc1	83	69.727	ENSVVUG00000021671	-	74	70.000	Vulpes_vulpes
ENSLBEG00000019122	dkc1	98	78.151	ENSXETG00000032517	DKC1	84	83.803	Xenopus_tropicalis
ENSLBEG00000019122	dkc1	90	89.245	ENSXCOG00000005498	dkc1	91	89.930	Xiphophorus_couchianus
ENSLBEG00000019122	dkc1	93	89.404	ENSXMAG00000004919	dkc1	86	91.101	Xiphophorus_maculatus