EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000019228 (Gene tree)
Gene ID: 109993230
Gene Symbol: gars (1 of many)
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycine--tRNA ligase
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10144 bases
Position: chrFKLU01000009.1:2610061-2620204
Accession: 109993230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000025237	HGTP_anticodon	PF03129.20	2.5e-21	1	1
ENSLBEP00000025274	HGTP_anticodon	PF03129.20	2.6e-21	1	1
ENSLBEP00000025237	tRNA-synt_2b	PF00587.25	5.9e-11	1	1
ENSLBEP00000025274	tRNA-synt_2b	PF00587.25	6.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000026552	-	3366	-	ENSLBEP00000025274	756 (aa)	-	-
ENSLBET00000026514	-	3537	XM_020646117	ENSLBEP00000025237	749 (aa)	XP_020501773	UPI0009B313E5

Gene Model

Click here to download ENSLBEG00000019228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000019228	gars	90	84.911	ENSLBEG00000019179	gars	100	84.911
ENSLBEG00000019228	gars	52	81.443	ENSLBEG00000013122	-	100	81.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019228	gars	92	85.507	ENSG00000106105	GARS	99	80.533	Homo_sapiens
ENSLBEG00000019228	gars	100	94.126	ENSAPOG00000019999	gars	99	94.126	Acanthochromis_polyacanthus
ENSLBEG00000019228	gars	91	82.353	ENSAPOG00000020089	gars	99	82.353	Acanthochromis_polyacanthus
ENSLBEG00000019228	gars	92	86.377	ENSAMEG00000006652	GARS	94	86.377	Ailuropoda_melanoleuca
ENSLBEG00000019228	gars	100	92.657	ENSACIG00000020744	gars	99	92.657	Amphilophus_citrinellus
ENSLBEG00000019228	gars	90	84.763	ENSACIG00000020797	gars	99	84.763	Amphilophus_citrinellus
ENSLBEG00000019228	gars	100	94.526	ENSAOCG00000009108	gars	99	94.526	Amphiprion_ocellaris
ENSLBEG00000019228	gars	68	87.255	ENSAOCG00000002479	gars	100	87.255	Amphiprion_ocellaris
ENSLBEG00000019228	gars	91	82.774	ENSAPEG00000018903	gars	99	82.774	Amphiprion_percula
ENSLBEG00000019228	gars	100	94.126	ENSAPEG00000018850	gars	99	94.126	Amphiprion_percula
ENSLBEG00000019228	gars	100	93.113	ENSATEG00000008784	gars	100	95.448	Anabas_testudineus
ENSLBEG00000019228	gars	62	88.362	ENSAPLG00000015638	-	100	88.362	Anas_platyrhynchos
ENSLBEG00000019228	gars	91	85.569	ENSACAG00000005601	GARS	100	85.569	Anolis_carolinensis
ENSLBEG00000019228	gars	91	86.423	ENSANAG00000022536	GARS	100	86.423	Aotus_nancymaae
ENSLBEG00000019228	gars	100	92.123	ENSACLG00000027174	gars	99	92.123	Astatotilapia_calliptera
ENSLBEG00000019228	gars	90	83.628	ENSACLG00000027158	gars	99	83.628	Astatotilapia_calliptera
ENSLBEG00000019228	gars	100	80.641	ENSAMXG00000014895	gars	96	90.787	Astyanax_mexicanus
ENSLBEG00000019228	gars	94	84.375	ENSBTAG00000018972	GARS	99	80.293	Bos_taurus
ENSLBEG00000019228	gars	90	57.504	WBGene00001744	gars-1	99	57.504	Caenorhabditis_elegans
ENSLBEG00000019228	gars	92	85.652	ENSCJAG00000008595	GARS	95	84.783	Callithrix_jacchus
ENSLBEG00000019228	gars	91	86.618	ENSCAFG00000003086	GARS	91	80.831	Canis_familiaris
ENSLBEG00000019228	gars	91	86.618	ENSCAFG00020004272	GARS	98	86.618	Canis_lupus_dingo
ENSLBEG00000019228	gars	94	83.807	ENSCHIG00000016912	GARS	100	87.175	Capra_hircus
ENSLBEG00000019228	gars	92	86.377	ENSTSYG00000008538	GARS	93	86.377	Carlito_syrichta
ENSLBEG00000019228	gars	84	68.038	ENSCAPG00000007526	GARS	100	68.038	Cavia_aperea
ENSLBEG00000019228	gars	90	85.185	ENSCPOG00000007547	GARS	93	85.185	Cavia_porcellus
ENSLBEG00000019228	gars	92	85.797	ENSCCAG00000011512	GARS	100	81.175	Cebus_capucinus
ENSLBEG00000019228	gars	95	83.754	ENSCATG00000036699	GARS	100	81.175	Cercocebus_atys
ENSLBEG00000019228	gars	92	85.797	ENSCLAG00000007985	GARS	97	85.797	Chinchilla_lanigera
ENSLBEG00000019228	gars	92	86.087	ENSCSAG00000014588	GARS	100	81.041	Chlorocebus_sabaeus
ENSLBEG00000019228	gars	91	74.490	ENSCHOG00000003253	GARS	92	74.490	Choloepus_hoffmanni
ENSLBEG00000019228	gars	89	87.145	ENSCPBG00000019482	GARS	92	87.145	Chrysemys_picta_bellii
ENSLBEG00000019228	gars	90	62.815	ENSCING00000008937	-	99	62.815	Ciona_intestinalis
ENSLBEG00000019228	gars	92	85.942	ENSCANG00000027727	GARS	99	81.067	Colobus_angolensis_palliatus
ENSLBEG00000019228	gars	92	86.357	ENSCGRG00001020450	Gars	94	86.357	Cricetulus_griseus_chok1gshd
ENSLBEG00000019228	gars	89	87.538	ENSCGRG00000008342	Gars	94	87.538	Cricetulus_griseus_crigri
ENSLBEG00000019228	gars	100	91.333	ENSCSEG00000017671	gars	99	91.333	Cynoglossus_semilaevis
ENSLBEG00000019228	gars	90	77.729	ENSCSEG00000017654	gars	98	77.729	Cynoglossus_semilaevis
ENSLBEG00000019228	gars	100	92.133	ENSCVAG00000007149	gars	99	92.133	Cyprinodon_variegatus
ENSLBEG00000019228	gars	92	92.319	ENSDARG00000059070	gars	100	92.319	Danio_rerio
ENSLBEG00000019228	gars	91	87.172	ENSDNOG00000046478	GARS	100	88.012	Dasypus_novemcinctus
ENSLBEG00000019228	gars	96	81.856	ENSDORG00000002672	Gars	99	81.856	Dipodomys_ordii
ENSLBEG00000019228	gars	93	60.402	FBgn0027088	GlyRS	99	61.630	Drosophila_melanogaster
ENSLBEG00000019228	gars	84	84.579	ENSETEG00000012196	GARS	98	84.579	Echinops_telfairi
ENSLBEG00000019228	gars	64	79.583	ENSEBUG00000002254	gars	89	79.583	Eptatretus_burgeri
ENSLBEG00000019228	gars	63	75.105	ENSEBUG00000002654	gars	86	75.105	Eptatretus_burgeri
ENSLBEG00000019228	gars	92	86.397	ENSEASG00005000388	GARS	99	81.200	Equus_asinus_asinus
ENSLBEG00000019228	gars	92	86.541	ENSECAG00000019373	GARS	99	81.333	Equus_caballus
ENSLBEG00000019228	gars	100	89.733	ENSELUG00000003692	gars	100	89.733	Esox_lucius
ENSLBEG00000019228	gars	92	86.522	ENSFCAG00000011415	GARS	81	86.522	Felis_catus
ENSLBEG00000019228	gars	82	87.662	ENSFALG00000006550	GARS	100	87.662	Ficedula_albicollis
ENSLBEG00000019228	gars	89	86.767	ENSFDAG00000014466	GARS	100	86.767	Fukomys_damarensis
ENSLBEG00000019228	gars	100	92.000	ENSFHEG00000013189	gars	99	92.000	Fundulus_heteroclitus
ENSLBEG00000019228	gars	83	80.449	ENSGMOG00000008856	-	100	80.449	Gadus_morhua
ENSLBEG00000019228	gars	100	87.850	ENSGMOG00000010728	gars	100	87.850	Gadus_morhua
ENSLBEG00000019228	gars	91	86.277	ENSGALG00000005694	GARS	100	86.277	Gallus_gallus
ENSLBEG00000019228	gars	100	92.000	ENSGAFG00000005228	gars	99	92.000	Gambusia_affinis
ENSLBEG00000019228	gars	100	91.722	ENSGACG00000003410	gars	100	91.722	Gasterosteus_aculeatus
ENSLBEG00000019228	gars	82	88.331	ENSGAGG00000017755	GARS	99	88.331	Gopherus_agassizii
ENSLBEG00000019228	gars	92	85.797	ENSGGOG00000004916	GARS	99	80.800	Gorilla_gorilla
ENSLBEG00000019228	gars	100	92.390	ENSHBUG00000016481	gars	99	92.390	Haplochromis_burtoni
ENSLBEG00000019228	gars	90	83.038	ENSHBUG00000000815	gars	99	83.038	Haplochromis_burtoni
ENSLBEG00000019228	gars	92	86.087	ENSHGLG00000016342	GARS	93	86.087	Heterocephalus_glaber_female
ENSLBEG00000019228	gars	92	85.217	ENSHGLG00100006787	GARS	97	85.217	Heterocephalus_glaber_male
ENSLBEG00000019228	gars	91	89.927	ENSHCOG00000005261	gars	100	89.927	Hippocampus_comes
ENSLBEG00000019228	gars	50	70.292	ENSHCOG00000005286	gars	96	70.292	Hippocampus_comes
ENSLBEG00000019228	gars	100	82.243	ENSIPUG00000011443	gars	100	82.243	Ictalurus_punctatus
ENSLBEG00000019228	gars	92	85.366	ENSSTOG00000015493	GARS	92	85.366	Ictidomys_tridecemlineatus
ENSLBEG00000019228	gars	91	85.569	ENSJJAG00000022474	Gars	99	85.569	Jaculus_jaculus
ENSLBEG00000019228	gars	100	90.305	ENSKMAG00000010428	gars	99	90.173	Kryptolebias_marmoratus
ENSLBEG00000019228	gars	69	87.115	ENSLACG00000002810	GARS	100	87.115	Latimeria_chalumnae
ENSLBEG00000019228	gars	100	86.248	ENSLOCG00000009688	gars	99	86.248	Lepisosteus_oculatus
ENSLBEG00000019228	gars	91	86.277	ENSLAFG00000002496	GARS	99	84.971	Loxodonta_africana
ENSLBEG00000019228	gars	95	83.754	ENSMFAG00000038863	GARS	100	81.175	Macaca_fascicularis
ENSLBEG00000019228	gars	95	83.754	ENSMMUG00000004719	GARS	100	81.175	Macaca_mulatta
ENSLBEG00000019228	gars	95	77.731	ENSMNEG00000043203	GARS	100	75.434	Macaca_nemestrina
ENSLBEG00000019228	gars	95	83.754	ENSMLEG00000044430	GARS	100	81.175	Mandrillus_leucophaeus
ENSLBEG00000019228	gars	98	92.402	ENSMAMG00000001894	gars	99	93.253	Mastacembelus_armatus
ENSLBEG00000019228	gars	100	92.123	ENSMZEG00005019740	gars	99	92.123	Maylandia_zebra
ENSLBEG00000019228	gars	90	84.024	ENSMZEG00005019754	gars	100	84.024	Maylandia_zebra
ENSLBEG00000019228	gars	92	85.962	ENSMGAG00000003162	GARS	93	85.962	Meleagris_gallopavo
ENSLBEG00000019228	gars	92	86.357	ENSMAUG00000016852	Gars	94	86.357	Mesocricetus_auratus
ENSLBEG00000019228	gars	91	86.715	ENSMICG00000046006	GARS	100	86.715	Microcebus_murinus
ENSLBEG00000019228	gars	97	82.740	ENSMOCG00000017680	Gars	99	82.740	Microtus_ochrogaster
ENSLBEG00000019228	gars	100	87.899	ENSMMOG00000009695	gars	100	87.899	Mola_mola
ENSLBEG00000019228	gars	100	92.390	ENSMALG00000006592	gars	93	92.390	Monopterus_albus
ENSLBEG00000019228	gars	99	81.561	MGP_CAROLIEiJ_G0028410	Gars	99	81.561	Mus_caroli
ENSLBEG00000019228	gars	92	86.212	ENSMUSG00000029777	Gars	94	86.212	Mus_musculus
ENSLBEG00000019228	gars	92	85.631	MGP_PahariEiJ_G0022160	Gars	94	85.631	Mus_pahari
ENSLBEG00000019228	gars	92	86.212	MGP_SPRETEiJ_G0029412	Gars	99	87.692	Mus_spretus
ENSLBEG00000019228	gars	92	86.522	ENSMPUG00000005116	GARS	99	81.467	Mustela_putorius_furo
ENSLBEG00000019228	gars	91	86.589	ENSMLUG00000002043	GARS	93	86.589	Myotis_lucifugus
ENSLBEG00000019228	gars	91	86.257	ENSNGAG00000021844	Gars	95	85.776	Nannospalax_galili
ENSLBEG00000019228	gars	100	92.657	ENSNBRG00000018585	gars	99	92.657	Neolamprologus_brichardi
ENSLBEG00000019228	gars	52	82.262	ENSNBRG00000018643	gars	100	82.262	Neolamprologus_brichardi
ENSLBEG00000019228	gars	92	86.087	ENSNLEG00000015152	GARS	99	81.067	Nomascus_leucogenys
ENSLBEG00000019228	gars	89	77.711	ENSMEUG00000001741	GARS	100	77.711	Notamacropus_eugenii
ENSLBEG00000019228	gars	80	87.245	ENSOPRG00000005342	GARS	81	87.245	Ochotona_princeps
ENSLBEG00000019228	gars	92	85.180	ENSODEG00000008246	GARS	88	85.180	Octodon_degus
ENSLBEG00000019228	gars	89	80.896	ENSOANG00000006262	GARS	91	80.896	Ornithorhynchus_anatinus
ENSLBEG00000019228	gars	91	86.745	ENSOCUG00000005295	GARS	99	86.745	Oryctolagus_cuniculus
ENSLBEG00000019228	gars	100	88.682	ENSORLG00000009470	gars	99	88.682	Oryzias_latipes
ENSLBEG00000019228	gars	95	90.268	ENSORLG00020013036	gars	100	89.950	Oryzias_latipes_hni
ENSLBEG00000019228	gars	100	89.987	ENSORLG00015012886	gars	99	89.987	Oryzias_latipes_hsok
ENSLBEG00000019228	gars	52	80.711	ENSOMEG00000000133	gars	100	80.711	Oryzias_melastigma
ENSLBEG00000019228	gars	92	85.942	ENSOGAG00000013321	GARS	93	85.942	Otolemur_garnettii
ENSLBEG00000019228	gars	94	83.807	ENSOARG00000008017	GARS	99	80.027	Ovis_aries
ENSLBEG00000019228	gars	92	85.797	ENSPPAG00000037266	GARS	94	85.797	Pan_paniscus
ENSLBEG00000019228	gars	92	86.522	ENSPPRG00000001917	GARS	93	86.522	Panthera_pardus
ENSLBEG00000019228	gars	91	87.334	ENSPTIG00000016096	GARS	99	87.334	Panthera_tigris_altaica
ENSLBEG00000019228	gars	92	85.797	ENSPTRG00000019042	GARS	99	80.723	Pan_troglodytes
ENSLBEG00000019228	gars	95	83.754	ENSPANG00000026231	GARS	100	81.175	Papio_anubis
ENSLBEG00000019228	gars	99	86.497	ENSPKIG00000014863	gars	97	86.497	Paramormyrops_kingsleyae
ENSLBEG00000019228	gars	89	87.688	ENSPSIG00000010935	GARS	99	88.474	Pelodiscus_sinensis
ENSLBEG00000019228	gars	52	79.949	ENSPMGG00000023648	gars	99	79.949	Periophthalmus_magnuspinnatus
ENSLBEG00000019228	gars	99	86.225	ENSPMGG00000023644	gars	99	86.225	Periophthalmus_magnuspinnatus
ENSLBEG00000019228	gars	89	87.368	ENSPEMG00000019930	Gars	100	87.368	Peromyscus_maniculatus_bairdii
ENSLBEG00000019228	gars	91	77.452	ENSPMAG00000006586	gars	98	77.452	Petromyzon_marinus
ENSLBEG00000019228	gars	92	81.977	ENSPCIG00000017010	GARS	90	81.977	Phascolarctos_cinereus
ENSLBEG00000019228	gars	100	91.867	ENSPFOG00000004593	gars	99	91.867	Poecilia_formosa
ENSLBEG00000019228	gars	100	91.600	ENSPLAG00000008038	gars	99	91.600	Poecilia_latipinna
ENSLBEG00000019228	gars	100	92.000	ENSPMEG00000005901	gars	99	92.000	Poecilia_mexicana
ENSLBEG00000019228	gars	99	92.369	ENSPREG00000020960	gars	97	92.369	Poecilia_reticulata
ENSLBEG00000019228	gars	92	85.444	ENSPPYG00000017673	GARS	93	85.217	Pongo_abelii
ENSLBEG00000019228	gars	100	78.933	ENSPCAG00000007199	GARS	93	83.913	Procavia_capensis
ENSLBEG00000019228	gars	92	83.188	ENSPCOG00000008887	GARS	93	83.188	Propithecus_coquereli
ENSLBEG00000019228	gars	100	81.333	ENSPVAG00000013565	GARS	99	81.333	Pteropus_vampyrus
ENSLBEG00000019228	gars	100	91.722	ENSPNYG00000005017	gars	99	91.722	Pundamilia_nyererei
ENSLBEG00000019228	gars	90	83.038	ENSPNYG00000004960	gars	99	83.038	Pundamilia_nyererei
ENSLBEG00000019228	gars	99	84.750	ENSPNAG00000020164	gars	99	84.750	Pygocentrus_nattereri
ENSLBEG00000019228	gars	92	86.067	ENSRNOG00000011052	Gars	95	86.067	Rattus_norvegicus
ENSLBEG00000019228	gars	92	83.188	ENSRBIG00000040287	GARS	99	78.400	Rhinopithecus_bieti
ENSLBEG00000019228	gars	92	85.507	ENSRROG00000044600	GARS	99	80.533	Rhinopithecus_roxellana
ENSLBEG00000019228	gars	82	47.859	YBR121C	GRS1	98	48.165	Saccharomyces_cerevisiae
ENSLBEG00000019228	gars	78	49.915	YPR081C	-	94	49.915	Saccharomyces_cerevisiae
ENSLBEG00000019228	gars	92	85.362	ENSSBOG00000022287	GARS	93	85.362	Saimiri_boliviensis_boliviensis
ENSLBEG00000019228	gars	91	77.681	ENSSHAG00000003419	GARS	100	77.681	Sarcophilus_harrisii
ENSLBEG00000019228	gars	95	86.245	ENSSFOG00015000573	gars	99	83.617	Scleropages_formosus
ENSLBEG00000019228	gars	100	94.674	ENSSMAG00000013672	gars	99	94.674	Scophthalmus_maximus
ENSLBEG00000019228	gars	90	85.037	ENSSMAG00000013709	gars	99	85.037	Scophthalmus_maximus
ENSLBEG00000019228	gars	100	95.594	ENSSDUG00000016795	gars	99	95.594	Seriola_dumerili
ENSLBEG00000019228	gars	90	74.631	ENSSDUG00000016758	gars	100	74.631	Seriola_dumerili
ENSLBEG00000019228	gars	90	85.651	ENSSLDG00000014238	gars	100	85.651	Seriola_lalandi_dorsalis
ENSLBEG00000019228	gars	100	95.327	ENSSLDG00000014279	gars	99	95.327	Seriola_lalandi_dorsalis
ENSLBEG00000019228	gars	69	77.143	ENSSARG00000008410	GARS	82	77.143	Sorex_araneus
ENSLBEG00000019228	gars	91	86.657	ENSSPUG00000001815	-	92	86.317	Sphenodon_punctatus
ENSLBEG00000019228	gars	100	87.984	ENSSPAG00000012003	gars	99	87.984	Stegastes_partitus
ENSLBEG00000019228	gars	91	86.423	ENSSSCG00000016677	GARS	99	80.667	Sus_scrofa
ENSLBEG00000019228	gars	89	84.478	ENSTGUG00000000364	GARS	100	84.478	Taeniopygia_guttata
ENSLBEG00000019228	gars	100	91.067	ENSTRUG00000017557	gars	100	91.067	Takifugu_rubripes
ENSLBEG00000019228	gars	95	91.842	ENSTNIG00000012738	gars	100	91.842	Tetraodon_nigroviridis
ENSLBEG00000019228	gars	85	80.408	ENSTBEG00000008972	GARS	86	80.408	Tupaia_belangeri
ENSLBEG00000019228	gars	89	85.994	ENSTTRG00000000334	GARS	99	85.994	Tursiops_truncatus
ENSLBEG00000019228	gars	91	87.299	ENSUAMG00000016756	GARS	99	81.600	Ursus_americanus
ENSLBEG00000019228	gars	89	87.087	ENSUMAG00000002158	GARS	100	88.474	Ursus_maritimus
ENSLBEG00000019228	gars	92	79.130	ENSVPAG00000009438	GARS	95	79.130	Vicugna_pacos
ENSLBEG00000019228	gars	91	86.618	ENSVVUG00000020981	GARS	88	86.131	Vulpes_vulpes
ENSLBEG00000019228	gars	99	79.735	ENSXETG00000018474	gars	98	79.735	Xenopus_tropicalis
ENSLBEG00000019228	gars	100	90.318	ENSXCOG00000010005	gars	99	90.318	Xiphophorus_couchianus
ENSLBEG00000019228	gars	100	91.600	ENSXMAG00000009402	gars	98	91.600	Xiphophorus_maculatus