EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000019253 (Gene tree)
Gene ID: 109995551
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: mRNA decay activator protein ZFP36L2-B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3363 bases
Position: chrFKLU01000327.1:153567-156929
Accession: 109995551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000025179	zf-CCCH	PF00642.24	2.2e-31	1	4
ENSLBEP00000025179	zf-CCCH	PF00642.24	2.2e-31	2	4
ENSLBEP00000025179	zf-CCCH	PF00642.24	2.2e-31	3	4
ENSLBEP00000025179	zf-CCCH	PF00642.24	2.2e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000026456	-	1766	XM_020649305	ENSLBEP00000025179	316 (aa)	XP_020504961	UPI0009B31CE8

Gene Model

Click here to download ENSLBEG00000019253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019253	cth1	90	71.478	ENSAPOG00000012552	cth1	95	73.239	Acanthochromis_polyacanthus
ENSLBEG00000019253	cth1	88	68.571	ENSACIG00000016026	cth1	99	65.528	Amphilophus_citrinellus
ENSLBEG00000019253	cth1	100	77.673	ENSAOCG00000001644	cth1	100	77.673	Amphiprion_ocellaris
ENSLBEG00000019253	cth1	100	77.673	ENSAPEG00000008930	cth1	100	77.673	Amphiprion_percula
ENSLBEG00000019253	cth1	99	79.755	ENSATEG00000002281	cth1	97	80.368	Anabas_testudineus
ENSLBEG00000019253	cth1	90	63.194	ENSACLG00000015353	cth1	95	63.668	Astatotilapia_calliptera
ENSLBEG00000019253	cth1	97	58.104	ENSAMXG00000025717	cth1	92	59.136	Astyanax_mexicanus
ENSLBEG00000019253	cth1	100	74.383	ENSCSEG00000014617	cth1	100	75.385	Cynoglossus_semilaevis
ENSLBEG00000019253	cth1	100	62.893	ENSCVAG00000001680	cth1	65	60.991	Cyprinodon_variegatus
ENSLBEG00000019253	cth1	91	61.794	ENSDARG00000057328	cth1	90	61.745	Danio_rerio
ENSLBEG00000019253	cth1	99	55.714	ENSELUG00000012738	cth1	89	56.113	Esox_lucius
ENSLBEG00000019253	cth1	100	63.608	ENSFHEG00000022665	cth1	100	61.491	Fundulus_heteroclitus
ENSLBEG00000019253	cth1	99	68.750	ENSGMOG00000007360	cth1	100	68.750	Gadus_morhua
ENSLBEG00000019253	cth1	100	61.180	ENSGAFG00000019288	cth1	100	61.180	Gambusia_affinis
ENSLBEG00000019253	cth1	99	69.841	ENSGACG00000000802	cth1	99	69.524	Gasterosteus_aculeatus
ENSLBEG00000019253	cth1	100	64.062	ENSHBUG00000014400	cth1	100	64.486	Haplochromis_burtoni
ENSLBEG00000019253	cth1	99	54.459	ENSHCOG00000010276	cth1	99	53.185	Hippocampus_comes
ENSLBEG00000019253	cth1	97	61.006	ENSIPUG00000018040	cth1	90	61.333	Ictalurus_punctatus
ENSLBEG00000019253	cth1	100	67.823	ENSKMAG00000005944	cth1	100	68.454	Kryptolebias_marmoratus
ENSLBEG00000019253	cth1	67	50.233	ENSLOCG00000002047	cth1	98	49.767	Lepisosteus_oculatus
ENSLBEG00000019253	cth1	99	60.471	ENSMAMG00000001525	cth1	63	70.464	Mastacembelus_armatus
ENSLBEG00000019253	cth1	100	64.062	ENSMZEG00005022335	cth1	100	64.486	Maylandia_zebra
ENSLBEG00000019253	cth1	94	76.974	ENSMMOG00000020518	cth1	100	77.049	Mola_mola
ENSLBEG00000019253	cth1	100	64.644	ENSMALG00000020738	cth1	58	75.893	Monopterus_albus
ENSLBEG00000019253	cth1	89	62.143	ENSNBRG00000022789	cth1	88	62.278	Neolamprologus_brichardi
ENSLBEG00000019253	cth1	99	66.458	ENSONIG00000021318	cth1	99	63.636	Oreochromis_niloticus
ENSLBEG00000019253	cth1	100	61.514	ENSORLG00000022847	cth1	100	60.815	Oryzias_latipes
ENSLBEG00000019253	cth1	100	61.199	ENSORLG00020011979	cth1	100	60.625	Oryzias_latipes_hni
ENSLBEG00000019253	cth1	100	61.635	ENSORLG00015013084	cth1	100	60.938	Oryzias_latipes_hsok
ENSLBEG00000019253	cth1	100	58.805	ENSOMEG00000005809	cth1	85	59.688	Oryzias_melastigma
ENSLBEG00000019253	cth1	97	54.154	ENSPKIG00000015883	cth1	64	58.667	Paramormyrops_kingsleyae
ENSLBEG00000019253	cth1	99	74.923	ENSPMGG00000004275	cth1	100	74.847	Periophthalmus_magnuspinnatus
ENSLBEG00000019253	cth1	100	63.125	ENSPFOG00000013583	cth1	94	63.043	Poecilia_formosa
ENSLBEG00000019253	cth1	100	63.125	ENSPLAG00000018158	cth1	94	63.043	Poecilia_latipinna
ENSLBEG00000019253	cth1	100	64.241	ENSPMEG00000005744	cth1	100	62.733	Poecilia_mexicana
ENSLBEG00000019253	cth1	99	64.537	ENSPREG00000004099	cth1	99	63.578	Poecilia_reticulata
ENSLBEG00000019253	cth1	90	61.972	ENSPNYG00000016705	cth1	85	61.423	Pundamilia_nyererei
ENSLBEG00000019253	cth1	97	57.975	ENSPNAG00000013147	cth1	90	59.801	Pygocentrus_nattereri
ENSLBEG00000019253	cth1	88	56.357	ENSSFOG00015017190	cth1	62	64.039	Scleropages_formosus
ENSLBEG00000019253	cth1	100	80.495	ENSSMAG00000007977	cth1	100	79.817	Scophthalmus_maximus
ENSLBEG00000019253	cth1	100	83.030	ENSSDUG00000004321	cth1	100	82.121	Seriola_dumerili
ENSLBEG00000019253	cth1	99	81.818	ENSSLDG00000010023	-	100	81.818	Seriola_lalandi_dorsalis
ENSLBEG00000019253	cth1	100	82.175	ENSSLDG00000012760	cth1	100	82.175	Seriola_lalandi_dorsalis
ENSLBEG00000019253	cth1	100	81.571	ENSSLDG00000004516	-	100	81.571	Seriola_lalandi_dorsalis
ENSLBEG00000019253	cth1	100	78.438	ENSSPAG00000018659	cth1	100	77.160	Stegastes_partitus
ENSLBEG00000019253	cth1	100	71.028	ENSTRUG00000012770	cth1	100	70.717	Takifugu_rubripes
ENSLBEG00000019253	cth1	100	67.913	ENSTNIG00000000740	cth1	100	67.913	Tetraodon_nigroviridis
ENSLBEG00000019253	cth1	86	56.250	ENSXCOG00000003710	cth1	82	55.285	Xiphophorus_couchianus
ENSLBEG00000019253	cth1	100	62.975	ENSXMAG00000023885	cth1	100	63.043	Xiphophorus_maculatus