EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000019428 (Gene tree)
Gene ID: 109997791
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5678 bases
Position: chrFKLU01000438.1:28585-34262
Accession: 109997791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000025457	MMR_HSR1	PF01926.23	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000026761	-	3000	-	ENSLBEP00000025473	190 (aa)	-	-
ENSLBET00000026745	-	3186	XM_020652400	ENSLBEP00000025457	205 (aa)	XP_020508056	UPI0009B3054C

Gene Model

Click here to download ENSLBEG00000019428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000019428	rab18b	89	47.340	ENSLBEG00000020796	rab2a	97	45.455
ENSLBEG00000019428	rab18b	80	45.455	ENSLBEG00000004128	rab5c	75	45.455
ENSLBEG00000019428	rab18b	79	48.171	ENSLBEG00000013756	rab12	67	48.171
ENSLBEG00000019428	rab18b	87	32.222	ENSLBEG00000028450	kras	95	32.222
ENSLBEG00000019428	rab18b	71	42.857	ENSLBEG00000025798	zgc:101559	63	42.857
ENSLBEG00000019428	rab18b	94	39.175	ENSLBEG00000003235	rab22a	98	39.175
ENSLBEG00000019428	rab18b	93	31.156	ENSLBEG00000006152	-	97	31.156
ENSLBEG00000019428	rab18b	79	50.311	ENSLBEG00000027226	-	68	50.311
ENSLBEG00000019428	rab18b	86	39.888	ENSLBEG00000003748	rab6a	84	39.888
ENSLBEG00000019428	rab18b	80	46.341	ENSLBEG00000026779	rab13	82	46.341
ENSLBEG00000019428	rab18b	91	38.860	ENSLBEG00000026777	rab33ba	80	38.860
ENSLBEG00000019428	rab18b	80	46.341	ENSLBEG00000004172	-	75	46.341
ENSLBEG00000019428	rab18b	73	36.667	ENSLBEG00000000119	rras2	83	36.686
ENSLBEG00000019428	rab18b	72	41.830	ENSLBEG00000018063	-	63	41.830
ENSLBEG00000019428	rab18b	79	32.927	ENSLBEG00000027628	si:cabz01085950.1	81	32.927
ENSLBEG00000019428	rab18b	80	41.317	ENSLBEG00000002926	si:dkey-34d22.5	76	41.317
ENSLBEG00000019428	rab18b	83	44.444	ENSLBEG00000006087	rab11ba	75	45.732
ENSLBEG00000019428	rab18b	87	47.802	ENSLBEG00000027781	rab1ab	89	47.802
ENSLBEG00000019428	rab18b	79	31.325	ENSLBEG00000028391	dnajc27	61	31.325
ENSLBEG00000019428	rab18b	79	36.747	ENSLBEG00000011478	rab9b	76	36.747
ENSLBEG00000019428	rab18b	77	31.481	ENSLBEG00000014885	rheb	85	31.481
ENSLBEG00000019428	rab18b	83	45.614	ENSLBEG00000003101	rab4a	80	45.614
ENSLBEG00000019428	rab18b	83	48.256	ENSLBEG00000001618	rab35b	100	42.857
ENSLBEG00000019428	rab18b	95	46.193	ENSLBEG00000028426	RAB1A	96	46.193
ENSLBEG00000019428	rab18b	85	33.146	ENSLBEG00000026006	rab34a	67	33.146
ENSLBEG00000019428	rab18b	83	40.351	ENSLBEG00000026930	rab6ba	80	40.351
ENSLBEG00000019428	rab18b	95	33.166	ENSLBEG00000017798	-	96	33.166
ENSLBEG00000019428	rab18b	83	39.766	ENSLBEG00000008746	RAB41	79	39.766
ENSLBEG00000019428	rab18b	95	33.668	ENSLBEG00000001796	RAB7A	96	33.668
ENSLBEG00000019428	rab18b	87	31.148	ENSLBEG00000003132	rras	92	32.474
ENSLBEG00000019428	rab18b	82	46.154	ENSLBEG00000026989	RAB15	78	46.154
ENSLBEG00000019428	rab18b	79	50.311	ENSLBEG00000005791	-	75	50.311
ENSLBEG00000019428	rab18b	84	45.977	ENSLBEG00000016446	rab25b	83	45.977
ENSLBEG00000019428	rab18b	81	35.882	ENSLBEG00000027691	RAB17	73	35.882
ENSLBEG00000019428	rab18b	83	40.698	ENSLBEG00000022630	-	81	40.698
ENSLBEG00000019428	rab18b	83	36.628	ENSLBEG00000013176	rab23	75	36.364
ENSLBEG00000019428	rab18b	87	37.989	ENSLBEG00000019372	rab6bb	84	37.989
ENSLBEG00000019428	rab18b	80	40.964	ENSLBEG00000018180	si:dkey-13a21.4	82	40.964
ENSLBEG00000019428	rab18b	81	33.133	ENSLBEG00000001905	hrasb	87	33.133
ENSLBEG00000019428	rab18b	93	31.156	ENSLBEG00000018812	RAB29	97	31.156
ENSLBEG00000019428	rab18b	79	44.444	ENSLBEG00000016417	rab11al	75	44.654
ENSLBEG00000019428	rab18b	83	40.116	ENSLBEG00000001313	RAB39B	81	40.116
ENSLBEG00000019428	rab18b	82	44.379	ENSLBEG00000002367	rab25a	79	44.379
ENSLBEG00000019428	rab18b	83	35.838	ENSLBEG00000025705	si:ch73-116o1.2	83	35.838
ENSLBEG00000019428	rab18b	79	46.296	ENSLBEG00000026857	rab11a	75	46.296
ENSLBEG00000019428	rab18b	57	37.069	ENSLBEG00000027819	rab34b	58	37.069
ENSLBEG00000019428	rab18b	80	41.212	ENSLBEG00000001193	rab42a	76	41.212
ENSLBEG00000019428	rab18b	80	46.951	ENSLBEG00000015248	rab11bb	75	46.951
ENSLBEG00000019428	rab18b	71	45.578	ENSLBEG00000014427	rab33a	66	45.578
ENSLBEG00000019428	rab18b	81	48.214	ENSLBEG00000013463	rab15	77	48.214
ENSLBEG00000019428	rab18b	79	42.857	ENSLBEG00000027539	-	77	42.857
ENSLBEG00000019428	rab18b	80	42.683	ENSLBEG00000005981	-	64	52.427
ENSLBEG00000019428	rab18b	81	42.262	ENSLBEG00000002516	rab5aa	74	42.262
ENSLBEG00000019428	rab18b	99	45.813	ENSLBEG00000001146	rab30	98	45.813
ENSLBEG00000019428	rab18b	99	83.333	ENSLBEG00000005861	rab18a	95	83.333
ENSLBEG00000019428	rab18b	85	34.463	ENSLBEG00000003644	rabl2	78	34.463
ENSLBEG00000019428	rab18b	80	46.951	ENSLBEG00000019435	rab14	76	46.951
ENSLBEG00000019428	rab18b	79	39.157	ENSLBEG00000005128	-	74	39.157
ENSLBEG00000019428	rab18b	80	45.732	ENSLBEG00000026790	-	76	45.732
ENSLBEG00000019428	rab18b	95	45.918	ENSLBEG00000021040	rab1ba	96	45.918
ENSLBEG00000019428	rab18b	93	34.872	ENSLBEG00000020582	rab9a	97	34.872
ENSLBEG00000019428	rab18b	87	32.796	ENSLBEG00000005018	rab32b	88	32.796
ENSLBEG00000019428	rab18b	58	32.231	ENSLBEG00000011152	arl4d	60	32.231
ENSLBEG00000019428	rab18b	80	46.951	ENSLBEG00000007681	si:dkey-16l2.16	86	44.565
ENSLBEG00000019428	rab18b	80	45.455	ENSLBEG00000010408	-	75	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019428	rab18b	99	85.854	ENSG00000099246	RAB18	99	88.889	Homo_sapiens
ENSLBEG00000019428	rab18b	100	93.171	ENSAPOG00000019881	rab18b	100	93.171	Acanthochromis_polyacanthus
ENSLBEG00000019428	rab18b	99	74.894	ENSAMEG00000015990	RAB18	99	75.319	Ailuropoda_melanoleuca
ENSLBEG00000019428	rab18b	100	93.659	ENSACIG00000008102	rab18b	100	93.659	Amphilophus_citrinellus
ENSLBEG00000019428	rab18b	100	92.683	ENSAOCG00000013479	rab18b	100	92.683	Amphiprion_ocellaris
ENSLBEG00000019428	rab18b	100	92.195	ENSAPEG00000022923	rab18b	100	92.195	Amphiprion_percula
ENSLBEG00000019428	rab18b	100	90.244	ENSATEG00000002952	rab18b	100	90.244	Anabas_testudineus
ENSLBEG00000019428	rab18b	99	85.854	ENSANAG00000035856	RAB18	99	86.341	Aotus_nancymaae
ENSLBEG00000019428	rab18b	100	93.171	ENSACLG00000015289	rab18b	100	93.171	Astatotilapia_calliptera
ENSLBEG00000019428	rab18b	99	86.765	ENSAMXG00000042073	rab18b	99	86.765	Astyanax_mexicanus
ENSLBEG00000019428	rab18b	99	85.854	ENSBTAG00000009871	RAB18	88	86.341	Bos_taurus
ENSLBEG00000019428	rab18b	99	84.878	ENSBTAG00000050873	-	99	84.878	Bos_taurus
ENSLBEG00000019428	rab18b	99	85.854	ENSCJAG00000045749	RAB18	99	86.341	Callithrix_jacchus
ENSLBEG00000019428	rab18b	99	85.854	ENSCAFG00020003253	RAB18	99	86.341	Canis_lupus_dingo
ENSLBEG00000019428	rab18b	99	85.854	ENSCHIG00000008749	RAB18	99	86.341	Capra_hircus
ENSLBEG00000019428	rab18b	99	85.366	ENSTSYG00000013092	RAB18	99	85.854	Carlito_syrichta
ENSLBEG00000019428	rab18b	99	86.408	ENSCPOG00000032827	RAB18	99	86.408	Cavia_porcellus
ENSLBEG00000019428	rab18b	99	85.854	ENSCCAG00000006762	RAB18	99	86.341	Cebus_capucinus
ENSLBEG00000019428	rab18b	99	85.854	ENSCATG00000009672	RAB18	99	86.341	Cercocebus_atys
ENSLBEG00000019428	rab18b	99	85.854	ENSCSAG00000011749	RAB18	99	86.341	Chlorocebus_sabaeus
ENSLBEG00000019428	rab18b	99	85.854	ENSCANG00000035397	RAB18	99	86.341	Colobus_angolensis_palliatus
ENSLBEG00000019428	rab18b	99	86.408	ENSCGRG00001017519	Rab18	99	86.408	Cricetulus_griseus_chok1gshd
ENSLBEG00000019428	rab18b	99	86.408	ENSCGRG00000017201	Rab18	99	86.408	Cricetulus_griseus_crigri
ENSLBEG00000019428	rab18b	95	93.333	ENSCSEG00000016803	rab18b	99	93.333	Cynoglossus_semilaevis
ENSLBEG00000019428	rab18b	99	86.275	ENSDARG00000098344	rab18b	99	86.275	Danio_rerio
ENSLBEG00000019428	rab18b	56	87.719	ENSDNOG00000038845	-	75	87.719	Dasypus_novemcinctus
ENSLBEG00000019428	rab18b	99	85.854	ENSDNOG00000047713	RAB18	99	86.341	Dasypus_novemcinctus
ENSLBEG00000019428	rab18b	85	82.759	ENSDORG00000029360	-	83	82.759	Dipodomys_ordii
ENSLBEG00000019428	rab18b	99	85.922	ENSDORG00000028596	-	99	85.922	Dipodomys_ordii
ENSLBEG00000019428	rab18b	99	85.854	ENSEASG00005007164	RAB18	99	86.341	Equus_asinus_asinus
ENSLBEG00000019428	rab18b	99	85.854	ENSECAG00000017521	RAB18	88	86.341	Equus_caballus
ENSLBEG00000019428	rab18b	100	83.981	ENSELUG00000016450	rab18b	100	83.981	Esox_lucius
ENSLBEG00000019428	rab18b	99	85.854	ENSFCAG00000027161	RAB18	99	86.341	Felis_catus
ENSLBEG00000019428	rab18b	94	86.458	ENSFALG00000007160	RAB18	99	85.437	Ficedula_albicollis
ENSLBEG00000019428	rab18b	100	90.732	ENSFHEG00000020035	rab18b	100	90.732	Fundulus_heteroclitus
ENSLBEG00000019428	rab18b	100	85.366	ENSGMOG00000016608	rab18b	100	85.366	Gadus_morhua
ENSLBEG00000019428	rab18b	99	85.854	ENSGALG00000007435	RAB18	99	86.341	Gallus_gallus
ENSLBEG00000019428	rab18b	100	91.220	ENSGAFG00000008560	rab18b	100	91.220	Gambusia_affinis
ENSLBEG00000019428	rab18b	100	90.732	ENSGACG00000016395	rab18b	100	90.732	Gasterosteus_aculeatus
ENSLBEG00000019428	rab18b	99	85.854	ENSGGOG00000008086	RAB18	99	86.341	Gorilla_gorilla
ENSLBEG00000019428	rab18b	100	93.171	ENSHBUG00000003696	rab18b	100	93.171	Haplochromis_burtoni
ENSLBEG00000019428	rab18b	99	74.510	ENSHGLG00000007301	-	95	74.510	Heterocephalus_glaber_female
ENSLBEG00000019428	rab18b	99	86.341	ENSHGLG00000004365	RAB18	99	86.341	Heterocephalus_glaber_female
ENSLBEG00000019428	rab18b	99	74.510	ENSHGLG00100009117	-	95	74.510	Heterocephalus_glaber_male
ENSLBEG00000019428	rab18b	99	86.341	ENSHGLG00100013089	-	99	86.341	Heterocephalus_glaber_male
ENSLBEG00000019428	rab18b	100	92.683	ENSHCOG00000002217	rab18b	100	92.683	Hippocampus_comes
ENSLBEG00000019428	rab18b	99	84.314	ENSIPUG00000010859	rab18b	99	84.314	Ictalurus_punctatus
ENSLBEG00000019428	rab18b	99	86.408	ENSSTOG00000014560	-	99	86.408	Ictidomys_tridecemlineatus
ENSLBEG00000019428	rab18b	100	91.220	ENSKMAG00000007364	rab18b	100	91.220	Kryptolebias_marmoratus
ENSLBEG00000019428	rab18b	99	76.471	ENSLACG00000011256	rab18b	99	76.471	Latimeria_chalumnae
ENSLBEG00000019428	rab18b	94	86.979	ENSLAFG00000015582	RAB18	99	86.341	Loxodonta_africana
ENSLBEG00000019428	rab18b	99	85.854	ENSMFAG00000006430	RAB18	99	86.341	Macaca_fascicularis
ENSLBEG00000019428	rab18b	98	86.070	ENSMMUG00000046971	RAB18	73	86.070	Macaca_mulatta
ENSLBEG00000019428	rab18b	99	85.854	ENSMNEG00000038180	RAB18	99	86.341	Macaca_nemestrina
ENSLBEG00000019428	rab18b	99	85.854	ENSMLEG00000033595	RAB18	99	86.341	Mandrillus_leucophaeus
ENSLBEG00000019428	rab18b	99	90.196	ENSMAMG00000018445	rab18b	99	90.196	Mastacembelus_armatus
ENSLBEG00000019428	rab18b	100	93.171	ENSMZEG00005008244	rab18b	100	93.171	Maylandia_zebra
ENSLBEG00000019428	rab18b	99	75.490	ENSMAUG00000020698	-	99	75.490	Mesocricetus_auratus
ENSLBEG00000019428	rab18b	94	86.979	ENSMICG00000017280	RAB18	99	86.341	Microcebus_murinus
ENSLBEG00000019428	rab18b	99	86.408	ENSMOCG00000013044	Rab18	99	86.408	Microtus_ochrogaster
ENSLBEG00000019428	rab18b	100	76.959	ENSMMOG00000017849	rab18b	100	77.419	Mola_mola
ENSLBEG00000019428	rab18b	99	78.922	ENSMODG00000024936	-	99	78.922	Monodelphis_domestica
ENSLBEG00000019428	rab18b	99	86.275	ENSMODG00000008253	RAB18	99	86.275	Monodelphis_domestica
ENSLBEG00000019428	rab18b	99	90.686	ENSMALG00000005069	rab18b	99	90.686	Monopterus_albus
ENSLBEG00000019428	rab18b	99	85.854	MGP_CAROLIEiJ_G0021978	Rab18	99	85.854	Mus_caroli
ENSLBEG00000019428	rab18b	99	85.854	ENSMUSG00000073639	Rab18	99	85.854	Mus_musculus
ENSLBEG00000019428	rab18b	99	85.854	MGP_PahariEiJ_G0018716	Rab18	99	85.854	Mus_pahari
ENSLBEG00000019428	rab18b	99	85.854	MGP_SPRETEiJ_G0022894	Rab18	99	85.854	Mus_spretus
ENSLBEG00000019428	rab18b	99	85.854	ENSMPUG00000010592	RAB18	99	86.341	Mustela_putorius_furo
ENSLBEG00000019428	rab18b	99	74.894	ENSMLUG00000027295	RAB18	99	75.319	Myotis_lucifugus
ENSLBEG00000019428	rab18b	99	86.408	ENSNGAG00000001465	Rab18	99	86.408	Nannospalax_galili
ENSLBEG00000019428	rab18b	100	92.683	ENSNBRG00000008137	rab18b	100	92.683	Neolamprologus_brichardi
ENSLBEG00000019428	rab18b	99	85.854	ENSNLEG00000016970	RAB18	99	86.341	Nomascus_leucogenys
ENSLBEG00000019428	rab18b	99	86.408	ENSODEG00000004150	-	99	86.408	Octodon_degus
ENSLBEG00000019428	rab18b	100	92.683	ENSONIG00000018673	rab18b	100	92.683	Oreochromis_niloticus
ENSLBEG00000019428	rab18b	91	89.305	ENSOANG00000021391	RAB18	99	87.379	Ornithorhynchus_anatinus
ENSLBEG00000019428	rab18b	99	84.878	ENSOCUG00000022307	RAB18	99	84.878	Oryctolagus_cuniculus
ENSLBEG00000019428	rab18b	100	90.732	ENSORLG00000009609	rab18b	100	90.732	Oryzias_latipes
ENSLBEG00000019428	rab18b	100	90.732	ENSORLG00020011590	rab18b	100	90.732	Oryzias_latipes_hni
ENSLBEG00000019428	rab18b	100	90.732	ENSORLG00015007182	rab18b	100	90.732	Oryzias_latipes_hsok
ENSLBEG00000019428	rab18b	100	90.732	ENSOMEG00000007546	rab18b	100	90.732	Oryzias_melastigma
ENSLBEG00000019428	rab18b	94	86.979	ENSOGAG00000028015	RAB18	99	86.341	Otolemur_garnettii
ENSLBEG00000019428	rab18b	99	85.854	ENSOARG00000016208	RAB18	99	86.341	Ovis_aries
ENSLBEG00000019428	rab18b	99	85.854	ENSPPAG00000041625	RAB18	99	86.341	Pan_paniscus
ENSLBEG00000019428	rab18b	99	85.854	ENSPPRG00000010314	RAB18	99	86.341	Panthera_pardus
ENSLBEG00000019428	rab18b	99	85.854	ENSPTIG00000011667	RAB18	99	86.341	Panthera_tigris_altaica
ENSLBEG00000019428	rab18b	99	85.854	ENSPTRG00000002384	RAB18	99	86.341	Pan_troglodytes
ENSLBEG00000019428	rab18b	99	85.854	ENSPANG00000023005	RAB18	99	86.341	Papio_anubis
ENSLBEG00000019428	rab18b	98	82.843	ENSPMAG00000005322	rab18b	98	82.843	Petromyzon_marinus
ENSLBEG00000019428	rab18b	99	86.765	ENSPCIG00000028705	-	88	86.765	Phascolarctos_cinereus
ENSLBEG00000019428	rab18b	100	91.220	ENSPFOG00000013491	rab18b	100	91.220	Poecilia_formosa
ENSLBEG00000019428	rab18b	100	91.220	ENSPLAG00000019136	rab18b	100	91.220	Poecilia_latipinna
ENSLBEG00000019428	rab18b	100	91.220	ENSPMEG00000008223	rab18b	100	91.220	Poecilia_mexicana
ENSLBEG00000019428	rab18b	99	85.854	ENSPPYG00000002172	RAB18	99	86.341	Pongo_abelii
ENSLBEG00000019428	rab18b	94	86.979	ENSPCOG00000018906	RAB18	99	86.341	Propithecus_coquereli
ENSLBEG00000019428	rab18b	100	93.171	ENSPNYG00000001751	rab18b	100	93.171	Pundamilia_nyererei
ENSLBEG00000019428	rab18b	99	85.784	ENSPNAG00000002404	rab18b	99	85.784	Pygocentrus_nattereri
ENSLBEG00000019428	rab18b	99	86.408	ENSRNOG00000018972	Rab18	99	86.408	Rattus_norvegicus
ENSLBEG00000019428	rab18b	99	85.366	ENSRBIG00000035948	RAB18	99	85.854	Rhinopithecus_bieti
ENSLBEG00000019428	rab18b	99	85.854	ENSRROG00000040563	RAB18	99	86.341	Rhinopithecus_roxellana
ENSLBEG00000019428	rab18b	99	86.765	ENSSHAG00000007613	RAB18	99	86.765	Sarcophilus_harrisii
ENSLBEG00000019428	rab18b	100	92.683	ENSSMAG00000011814	rab18b	100	92.683	Scophthalmus_maximus
ENSLBEG00000019428	rab18b	100	93.659	ENSSDUG00000005960	rab18b	100	93.659	Seriola_dumerili
ENSLBEG00000019428	rab18b	100	93.659	ENSSLDG00000006014	rab18b	100	93.659	Seriola_lalandi_dorsalis
ENSLBEG00000019428	rab18b	100	92.195	ENSSPAG00000020875	rab18b	100	92.195	Stegastes_partitus
ENSLBEG00000019428	rab18b	99	85.854	ENSSSCG00000028655	RAB18	99	86.341	Sus_scrofa
ENSLBEG00000019428	rab18b	94	75.799	ENSTGUG00000001105	-	99	75.536	Taeniopygia_guttata
ENSLBEG00000019428	rab18b	100	91.220	ENSTRUG00000004283	rab18b	100	91.220	Takifugu_rubripes
ENSLBEG00000019428	rab18b	100	89.806	ENSTNIG00000007882	rab18b	100	89.806	Tetraodon_nigroviridis
ENSLBEG00000019428	rab18b	99	85.854	ENSVVUG00000001705	RAB18	99	86.341	Vulpes_vulpes
ENSLBEG00000019428	rab18b	100	92.195	ENSXMAG00000006945	rab18b	100	92.195	Xiphophorus_maculatus