EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000019457 (Gene tree)
Gene ID: 109983931
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5973 bases
Position: chrFKLU01000062.1:1720969-1726941
Accession: 109983931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000025492	PolyA_pol	PF01743.20	1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000026780	-	1212	XM_020633876	ENSLBEP00000025492	403 (aa)	XP_020489532	-

Gene Model

Click here to download ENSLBEG00000019457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019457	trnt1	97	62.927	ENSG00000072756	TRNT1	94	62.927	Homo_sapiens
ENSLBEG00000019457	trnt1	97	79.562	ENSAPOG00000013687	trnt1	96	79.562	Acanthochromis_polyacanthus
ENSLBEG00000019457	trnt1	97	62.864	ENSAMEG00000014520	TRNT1	94	62.864	Ailuropoda_melanoleuca
ENSLBEG00000019457	trnt1	97	80.049	ENSACIG00000021706	trnt1	96	80.049	Amphilophus_citrinellus
ENSLBEG00000019457	trnt1	97	81.265	ENSAOCG00000024612	trnt1	96	81.265	Amphiprion_ocellaris
ENSLBEG00000019457	trnt1	99	74.048	ENSAPEG00000022627	trnt1	98	74.048	Amphiprion_percula
ENSLBEG00000019457	trnt1	91	81.959	ENSATEG00000008928	trnt1	96	81.959	Anabas_testudineus
ENSLBEG00000019457	trnt1	86	65.217	ENSAPLG00000004258	TRNT1	91	65.217	Anas_platyrhynchos
ENSLBEG00000019457	trnt1	94	62.095	ENSACAG00000005657	TRNT1	92	62.095	Anolis_carolinensis
ENSLBEG00000019457	trnt1	96	63.145	ENSANAG00000024802	TRNT1	94	63.145	Aotus_nancymaae
ENSLBEG00000019457	trnt1	97	80.292	ENSACLG00000022227	trnt1	96	80.292	Astatotilapia_calliptera
ENSLBEG00000019457	trnt1	100	69.789	ENSAMXG00000003960	trnt1	99	69.789	Astyanax_mexicanus
ENSLBEG00000019457	trnt1	97	61.707	ENSBTAG00000019534	TRNT1	94	61.707	Bos_taurus
ENSLBEG00000019457	trnt1	94	42.615	WBGene00010089	hpo-31	93	42.615	Caenorhabditis_elegans
ENSLBEG00000019457	trnt1	96	63.391	ENSCJAG00000015466	TRNT1	94	63.391	Callithrix_jacchus
ENSLBEG00000019457	trnt1	92	64.962	ENSCAFG00000005985	TRNT1	90	64.962	Canis_familiaris
ENSLBEG00000019457	trnt1	92	64.962	ENSCAFG00020014746	TRNT1	90	64.962	Canis_lupus_dingo
ENSLBEG00000019457	trnt1	97	62.683	ENSCHIG00000007030	TRNT1	94	62.683	Capra_hircus
ENSLBEG00000019457	trnt1	97	63.659	ENSTSYG00000013390	TRNT1	94	63.659	Carlito_syrichta
ENSLBEG00000019457	trnt1	85	50.273	ENSCAPG00000006891	TRNT1	95	50.273	Cavia_aperea
ENSLBEG00000019457	trnt1	97	62.439	ENSCPOG00000007849	TRNT1	95	66.142	Cavia_porcellus
ENSLBEG00000019457	trnt1	94	62.095	ENSCCAG00000002919	TRNT1	96	62.095	Cebus_capucinus
ENSLBEG00000019457	trnt1	97	63.990	ENSCATG00000031985	TRNT1	93	63.990	Cercocebus_atys
ENSLBEG00000019457	trnt1	97	62.683	ENSCLAG00000005186	TRNT1	92	73.980	Chinchilla_lanigera
ENSLBEG00000019457	trnt1	97	63.990	ENSCSAG00000011052	TRNT1	94	63.990	Chlorocebus_sabaeus
ENSLBEG00000019457	trnt1	85	73.846	ENSCHOG00000005712	TRNT1	79	73.846	Choloepus_hoffmanni
ENSLBEG00000019457	trnt1	97	61.466	ENSCPBG00000017636	TRNT1	96	61.466	Chrysemys_picta_bellii
ENSLBEG00000019457	trnt1	91	38.205	ENSCING00000007069	-	96	38.205	Ciona_intestinalis
ENSLBEG00000019457	trnt1	91	39.948	ENSCSAVG00000007494	-	91	39.948	Ciona_savignyi
ENSLBEG00000019457	trnt1	97	64.234	ENSCANG00000039030	TRNT1	94	64.234	Colobus_angolensis_palliatus
ENSLBEG00000019457	trnt1	97	62.439	ENSCGRG00001009998	Trnt1	94	62.439	Cricetulus_griseus_chok1gshd
ENSLBEG00000019457	trnt1	97	62.439	ENSCGRG00000013410	Trnt1	94	73.367	Cricetulus_griseus_crigri
ENSLBEG00000019457	trnt1	97	76.886	ENSCSEG00000008157	trnt1	96	76.886	Cynoglossus_semilaevis
ENSLBEG00000019457	trnt1	97	77.129	ENSCVAG00000019770	trnt1	96	77.129	Cyprinodon_variegatus
ENSLBEG00000019457	trnt1	100	70.023	ENSDARG00000075297	trnt1	99	70.023	Danio_rerio
ENSLBEG00000019457	trnt1	97	64.390	ENSDNOG00000008837	TRNT1	94	64.390	Dasypus_novemcinctus
ENSLBEG00000019457	trnt1	94	63.682	ENSDORG00000014035	Trnt1	93	63.682	Dipodomys_ordii
ENSLBEG00000019457	trnt1	96	45.301	FBgn0037369	CG2100	86	45.301	Drosophila_melanogaster
ENSLBEG00000019457	trnt1	57	65.060	ENSETEG00000018177	TRNT1	100	65.060	Echinops_telfairi
ENSLBEG00000019457	trnt1	97	56.867	ENSEBUG00000012779	-	96	56.867	Eptatretus_burgeri
ENSLBEG00000019457	trnt1	97	63.902	ENSEASG00005003577	TRNT1	94	63.902	Equus_asinus_asinus
ENSLBEG00000019457	trnt1	97	64.146	ENSECAG00000014420	TRNT1	94	64.146	Equus_caballus
ENSLBEG00000019457	trnt1	97	62.439	ENSEEUG00000009567	TRNT1	94	62.439	Erinaceus_europaeus
ENSLBEG00000019457	trnt1	97	74.818	ENSELUG00000003802	trnt1	96	74.818	Esox_lucius
ENSLBEG00000019457	trnt1	97	63.171	ENSFCAG00000026805	TRNT1	94	63.171	Felis_catus
ENSLBEG00000019457	trnt1	86	65.761	ENSFALG00000013539	TRNT1	96	65.761	Ficedula_albicollis
ENSLBEG00000019457	trnt1	97	63.415	ENSFDAG00000018412	TRNT1	91	73.980	Fukomys_damarensis
ENSLBEG00000019457	trnt1	97	78.102	ENSFHEG00000019294	trnt1	96	78.102	Fundulus_heteroclitus
ENSLBEG00000019457	trnt1	97	76.456	ENSGMOG00000007460	trnt1	97	76.456	Gadus_morhua
ENSLBEG00000019457	trnt1	99	60.427	ENSGALG00000017368	TRNT1	98	60.427	Gallus_gallus
ENSLBEG00000019457	trnt1	97	77.129	ENSGAFG00000008647	trnt1	96	77.129	Gambusia_affinis
ENSLBEG00000019457	trnt1	97	78.589	ENSGACG00000011903	trnt1	96	78.589	Gasterosteus_aculeatus
ENSLBEG00000019457	trnt1	94	65.163	ENSGAGG00000020942	TRNT1	91	65.163	Gopherus_agassizii
ENSLBEG00000019457	trnt1	97	63.171	ENSGGOG00000015286	TRNT1	94	63.171	Gorilla_gorilla
ENSLBEG00000019457	trnt1	97	80.535	ENSHBUG00000002797	trnt1	96	80.535	Haplochromis_burtoni
ENSLBEG00000019457	trnt1	97	62.683	ENSHGLG00000003649	TRNT1	94	62.683	Heterocephalus_glaber_female
ENSLBEG00000019457	trnt1	95	59.259	ENSHGLG00000000221	-	93	59.259	Heterocephalus_glaber_female
ENSLBEG00000019457	trnt1	97	61.463	ENSHGLG00100016421	TRNT1	95	66.502	Heterocephalus_glaber_male
ENSLBEG00000019457	trnt1	97	73.479	ENSHCOG00000010618	trnt1	96	73.479	Hippocampus_comes
ENSLBEG00000019457	trnt1	100	70.258	ENSIPUG00000000971	trnt1	99	70.258	Ictalurus_punctatus
ENSLBEG00000019457	trnt1	98	61.848	ENSSTOG00000000150	TRNT1	97	72.637	Ictidomys_tridecemlineatus
ENSLBEG00000019457	trnt1	97	62.044	ENSJJAG00000018561	Trnt1	94	62.044	Jaculus_jaculus
ENSLBEG00000019457	trnt1	97	77.859	ENSKMAG00000011307	trnt1	96	77.859	Kryptolebias_marmoratus
ENSLBEG00000019457	trnt1	94	64.750	ENSLACG00000013227	TRNT1	92	64.750	Latimeria_chalumnae
ENSLBEG00000019457	trnt1	99	68.171	ENSLOCG00000011105	trnt1	96	68.171	Lepisosteus_oculatus
ENSLBEG00000019457	trnt1	97	63.415	ENSLAFG00000023191	TRNT1	94	63.415	Loxodonta_africana
ENSLBEG00000019457	trnt1	97	63.990	ENSMFAG00000045113	TRNT1	93	63.990	Macaca_fascicularis
ENSLBEG00000019457	trnt1	97	63.990	ENSMMUG00000017983	TRNT1	93	63.990	Macaca_mulatta
ENSLBEG00000019457	trnt1	97	63.990	ENSMNEG00000037805	TRNT1	93	63.990	Macaca_nemestrina
ENSLBEG00000019457	trnt1	86	65.395	ENSMLEG00000033671	TRNT1	96	65.395	Mandrillus_leucophaeus
ENSLBEG00000019457	trnt1	97	80.049	ENSMAMG00000023401	trnt1	96	80.049	Mastacembelus_armatus
ENSLBEG00000019457	trnt1	97	80.292	ENSMZEG00005009141	trnt1	96	80.292	Maylandia_zebra
ENSLBEG00000019457	trnt1	70	61.513	ENSMGAG00000009971	TRNT1	95	61.513	Meleagris_gallopavo
ENSLBEG00000019457	trnt1	94	63.158	ENSMAUG00000020707	Trnt1	92	63.158	Mesocricetus_auratus
ENSLBEG00000019457	trnt1	97	63.415	ENSMICG00000016615	TRNT1	94	63.415	Microcebus_murinus
ENSLBEG00000019457	trnt1	97	62.683	ENSMOCG00000004539	Trnt1	94	62.683	Microtus_ochrogaster
ENSLBEG00000019457	trnt1	97	77.616	ENSMMOG00000010742	trnt1	96	77.616	Mola_mola
ENSLBEG00000019457	trnt1	94	63.409	ENSMODG00000004368	TRNT1	92	63.409	Monodelphis_domestica
ENSLBEG00000019457	trnt1	97	76.399	ENSMALG00000008376	trnt1	98	75.735	Monopterus_albus
ENSLBEG00000019457	trnt1	94	63.910	MGP_CAROLIEiJ_G0028698	Trnt1	91	74.490	Mus_caroli
ENSLBEG00000019457	trnt1	96	63.300	ENSMUSG00000013736	Trnt1	91	74.490	Mus_musculus
ENSLBEG00000019457	trnt1	94	64.912	MGP_PahariEiJ_G0022449	Trnt1	97	75.510	Mus_pahari
ENSLBEG00000019457	trnt1	94	63.910	MGP_SPRETEiJ_G0029726	Trnt1	91	74.490	Mus_spretus
ENSLBEG00000019457	trnt1	94	63.158	ENSMPUG00000017017	TRNT1	92	63.158	Mustela_putorius_furo
ENSLBEG00000019457	trnt1	86	64.228	ENSMLUG00000011864	TRNT1	96	64.228	Myotis_lucifugus
ENSLBEG00000019457	trnt1	97	63.171	ENSNGAG00000000537	Trnt1	85	73.096	Nannospalax_galili
ENSLBEG00000019457	trnt1	81	79.769	ENSNBRG00000023606	trnt1	99	79.769	Neolamprologus_brichardi
ENSLBEG00000019457	trnt1	97	63.171	ENSNLEG00000003226	TRNT1	94	63.171	Nomascus_leucogenys
ENSLBEG00000019457	trnt1	94	62.907	ENSMEUG00000004684	TRNT1	92	62.907	Notamacropus_eugenii
ENSLBEG00000019457	trnt1	86	61.853	ENSOPRG00000015067	TRNT1	95	61.853	Ochotona_princeps
ENSLBEG00000019457	trnt1	97	62.927	ENSODEG00000007597	TRNT1	94	62.927	Octodon_degus
ENSLBEG00000019457	trnt1	97	80.292	ENSONIG00000020273	trnt1	95	80.292	Oreochromis_niloticus
ENSLBEG00000019457	trnt1	92	60.714	ENSOANG00000007514	TRNT1	91	60.714	Ornithorhynchus_anatinus
ENSLBEG00000019457	trnt1	92	63.427	ENSOCUG00000008580	TRNT1	91	63.427	Oryctolagus_cuniculus
ENSLBEG00000019457	trnt1	97	72.263	ENSORLG00000003165	trnt1	96	72.263	Oryzias_latipes
ENSLBEG00000019457	trnt1	97	72.506	ENSORLG00020022060	trnt1	96	72.506	Oryzias_latipes_hni
ENSLBEG00000019457	trnt1	97	72.263	ENSORLG00015018915	trnt1	96	72.263	Oryzias_latipes_hsok
ENSLBEG00000019457	trnt1	97	70.803	ENSOMEG00000003331	trnt1	96	70.803	Oryzias_melastigma
ENSLBEG00000019457	trnt1	97	62.683	ENSOARG00000008631	TRNT1	94	62.683	Ovis_aries
ENSLBEG00000019457	trnt1	97	62.927	ENSPPAG00000043566	TRNT1	94	62.927	Pan_paniscus
ENSLBEG00000019457	trnt1	97	63.171	ENSPPRG00000001327	TRNT1	94	63.171	Panthera_pardus
ENSLBEG00000019457	trnt1	97	63.171	ENSPTIG00000011448	TRNT1	94	63.171	Panthera_tigris_altaica
ENSLBEG00000019457	trnt1	97	62.927	ENSPTRG00000014564	TRNT1	94	62.927	Pan_troglodytes
ENSLBEG00000019457	trnt1	97	63.990	ENSPANG00000025944	TRNT1	93	63.990	Papio_anubis
ENSLBEG00000019457	trnt1	97	71.014	ENSPKIG00000020015	trnt1	96	71.014	Paramormyrops_kingsleyae
ENSLBEG00000019457	trnt1	89	65.000	ENSPSIG00000017356	TRNT1	96	65.000	Pelodiscus_sinensis
ENSLBEG00000019457	trnt1	97	75.912	ENSPMGG00000008888	trnt1	95	75.912	Periophthalmus_magnuspinnatus
ENSLBEG00000019457	trnt1	97	62.195	ENSPEMG00000019845	Trnt1	94	62.195	Peromyscus_maniculatus_bairdii
ENSLBEG00000019457	trnt1	96	62.500	ENSPCIG00000030436	TRNT1	94	62.500	Phascolarctos_cinereus
ENSLBEG00000019457	trnt1	96	76.961	ENSPFOG00000006194	trnt1	95	76.961	Poecilia_formosa
ENSLBEG00000019457	trnt1	96	76.961	ENSPLAG00000015623	trnt1	96	78.351	Poecilia_latipinna
ENSLBEG00000019457	trnt1	97	77.129	ENSPMEG00000012216	trnt1	96	78.351	Poecilia_mexicana
ENSLBEG00000019457	trnt1	97	76.886	ENSPREG00000021470	trnt1	96	76.886	Poecilia_reticulata
ENSLBEG00000019457	trnt1	97	62.927	ENSPPYG00000013702	TRNT1	94	62.927	Pongo_abelii
ENSLBEG00000019457	trnt1	86	64.850	ENSPCAG00000001951	TRNT1	96	64.850	Procavia_capensis
ENSLBEG00000019457	trnt1	97	63.415	ENSPCOG00000022228	TRNT1	94	63.415	Propithecus_coquereli
ENSLBEG00000019457	trnt1	86	64.578	ENSPVAG00000008784	TRNT1	96	64.578	Pteropus_vampyrus
ENSLBEG00000019457	trnt1	97	80.292	ENSPNYG00000003120	trnt1	96	80.292	Pundamilia_nyererei
ENSLBEG00000019457	trnt1	97	73.671	ENSPNAG00000000565	trnt1	96	73.671	Pygocentrus_nattereri
ENSLBEG00000019457	trnt1	97	63.171	ENSRNOG00000006432	Trnt1	94	63.171	Rattus_norvegicus
ENSLBEG00000019457	trnt1	97	63.260	ENSRBIG00000042632	TRNT1	94	63.260	Rhinopithecus_bieti
ENSLBEG00000019457	trnt1	97	64.234	ENSRROG00000036866	TRNT1	94	64.234	Rhinopithecus_roxellana
ENSLBEG00000019457	trnt1	96	63.391	ENSSBOG00000021208	TRNT1	94	63.391	Saimiri_boliviensis_boliviensis
ENSLBEG00000019457	trnt1	92	62.916	ENSSHAG00000018861	TRNT1	90	62.916	Sarcophilus_harrisii
ENSLBEG00000019457	trnt1	97	69.157	ENSSFOG00015020844	trnt1	96	69.157	Scleropages_formosus
ENSLBEG00000019457	trnt1	97	79.756	ENSSMAG00000015432	trnt1	94	79.756	Scophthalmus_maximus
ENSLBEG00000019457	trnt1	97	81.509	ENSSDUG00000012320	trnt1	96	81.509	Seriola_dumerili
ENSLBEG00000019457	trnt1	55	76.349	ENSSLDG00000016463	-	91	76.569	Seriola_lalandi_dorsalis
ENSLBEG00000019457	trnt1	97	81.265	ENSSLDG00000009325	trnt1	96	81.265	Seriola_lalandi_dorsalis
ENSLBEG00000019457	trnt1	86	66.213	ENSSPUG00000014153	TRNT1	96	66.213	Sphenodon_punctatus
ENSLBEG00000019457	trnt1	97	80.779	ENSSPAG00000021005	trnt1	96	80.779	Stegastes_partitus
ENSLBEG00000019457	trnt1	97	62.927	ENSSSCG00000011529	TRNT1	96	62.927	Sus_scrofa
ENSLBEG00000019457	trnt1	91	64.267	ENSTGUG00000010192	TRNT1	96	64.267	Taeniopygia_guttata
ENSLBEG00000019457	trnt1	99	76.316	ENSTRUG00000001088	trnt1	98	76.316	Takifugu_rubripes
ENSLBEG00000019457	trnt1	99	76.077	ENSTNIG00000007363	trnt1	96	76.077	Tetraodon_nigroviridis
ENSLBEG00000019457	trnt1	59	52.874	ENSTBEG00000006367	TRNT1	86	52.874	Tupaia_belangeri
ENSLBEG00000019457	trnt1	97	61.951	ENSTTRG00000007803	TRNT1	94	61.951	Tursiops_truncatus
ENSLBEG00000019457	trnt1	97	62.683	ENSUAMG00000022574	TRNT1	94	62.683	Ursus_americanus
ENSLBEG00000019457	trnt1	97	62.927	ENSUMAG00000024092	TRNT1	94	62.927	Ursus_maritimus
ENSLBEG00000019457	trnt1	92	64.962	ENSVVUG00000012810	TRNT1	90	64.962	Vulpes_vulpes
ENSLBEG00000019457	trnt1	95	55.419	ENSXETG00000025091	trnt1	98	55.949	Xenopus_tropicalis
ENSLBEG00000019457	trnt1	97	76.156	ENSXCOG00000010150	trnt1	96	76.156	Xiphophorus_couchianus
ENSLBEG00000019457	trnt1	97	76.886	ENSXMAG00000002227	trnt1	96	76.886	Xiphophorus_maculatus