EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000019562 (Gene tree)
Gene ID: 109981608
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 47912 bases
Position: chrFKLU01000033.1:1491731-1539642
Accession: 109981608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000025690	RRM_1	PF00076.22	1.8e-07	1	1
ENSLBEP00000025642	RRM_1	PF00076.22	2e-07	1	1
ENSLBEP00000025662	RRM_1	PF00076.22	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000026930	-	3129	XM_020630472	ENSLBEP00000025642	956 (aa)	XP_020486128	-
ENSLBET00000026978	-	2448	-	ENSLBEP00000025690	815 (aa)	-	-
ENSLBET00000026950	-	6414	XM_020630470	ENSLBEP00000025662	989 (aa)	XP_020486126	UPI0009B3B409

Gene Model

Click here to download ENSLBEG00000019562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019562	ppargc1a	85	71.368	ENSG00000109819	PPARGC1A	95	71.368	Homo_sapiens
ENSLBEG00000019562	ppargc1a	100	96.327	ENSAPOG00000018632	ppargc1a	94	97.095	Acanthochromis_polyacanthus
ENSLBEG00000019562	ppargc1a	89	82.209	ENSAMEG00000010421	PPARGC1A	81	82.286	Ailuropoda_melanoleuca
ENSLBEG00000019562	ppargc1a	100	80.512	ENSACIG00000009732	ppargc1a	98	96.266	Amphilophus_citrinellus
ENSLBEG00000019562	ppargc1a	100	96.327	ENSAOCG00000006754	ppargc1a	98	97.095	Amphiprion_ocellaris
ENSLBEG00000019562	ppargc1a	100	84.736	ENSAPEG00000022574	ppargc1a	98	97.095	Amphiprion_percula
ENSLBEG00000019562	ppargc1a	99	95.510	ENSATEG00000016702	ppargc1a	98	96.266	Anabas_testudineus
ENSLBEG00000019562	ppargc1a	89	82.927	ENSAPLG00000005303	PPARGC1A	94	74.886	Anas_platyrhynchos
ENSLBEG00000019562	ppargc1a	84	74.429	ENSACAG00000000741	PPARGC1A	65	81.714	Anolis_carolinensis
ENSLBEG00000019562	ppargc1a	100	55.052	ENSANAG00000035930	PPARGC1A	95	71.368	Aotus_nancymaae
ENSLBEG00000019562	ppargc1a	98	90.164	ENSACLG00000001002	ppargc1a	98	96.680	Astatotilapia_calliptera
ENSLBEG00000019562	ppargc1a	90	96.053	ENSAMXG00000002461	ppargc1a	99	96.053	Astyanax_mexicanus
ENSLBEG00000019562	ppargc1a	85	72.414	ENSBTAG00000017024	PPARGC1A	53	78.307	Bos_taurus
ENSLBEG00000019562	ppargc1a	83	74.634	ENSCJAG00000013024	PPARGC1A	95	71.368	Callithrix_jacchus
ENSLBEG00000019562	ppargc1a	85	72.414	ENSCAFG00000016519	PPARGC1A	95	72.414	Canis_familiaris
ENSLBEG00000019562	ppargc1a	83	71.154	ENSCAFG00020027242	PPARGC1A	95	71.154	Canis_lupus_dingo
ENSLBEG00000019562	ppargc1a	89	82.317	ENSCHIG00000015991	PPARGC1A	51	82.386	Capra_hircus
ENSLBEG00000019562	ppargc1a	84	74.661	ENSTSYG00000010439	PPARGC1A	95	71.795	Carlito_syrichta
ENSLBEG00000019562	ppargc1a	84	81.595	ENSCAPG00000005150	PPARGC1A	91	69.756	Cavia_aperea
ENSLBEG00000019562	ppargc1a	87	81.595	ENSCPOG00000001518	PPARGC1A	95	71.121	Cavia_porcellus
ENSLBEG00000019562	ppargc1a	89	82.822	ENSCCAG00000024681	PPARGC1A	95	71.368	Cebus_capucinus
ENSLBEG00000019562	ppargc1a	84	74.208	ENSCATG00000032575	PPARGC1A	95	71.368	Cercocebus_atys
ENSLBEG00000019562	ppargc1a	85	72.414	ENSCLAG00000002058	PPARGC1A	95	72.414	Chinchilla_lanigera
ENSLBEG00000019562	ppargc1a	84	74.208	ENSCSAG00000016575	PPARGC1A	95	71.368	Chlorocebus_sabaeus
ENSLBEG00000019562	ppargc1a	85	71.368	ENSCANG00000033426	PPARGC1A	95	71.368	Colobus_angolensis_palliatus
ENSLBEG00000019562	ppargc1a	89	81.595	ENSCGRG00001015534	Ppargc1a	95	71.552	Cricetulus_griseus_chok1gshd
ENSLBEG00000019562	ppargc1a	89	81.595	ENSCGRG00000000200	Ppargc1a	95	71.552	Cricetulus_griseus_crigri
ENSLBEG00000019562	ppargc1a	100	96.735	ENSCSEG00000006884	ppargc1a	97	98.276	Cynoglossus_semilaevis
ENSLBEG00000019562	ppargc1a	97	71.233	ENSCVAG00000016547	ppargc1a	99	70.032	Cyprinodon_variegatus
ENSLBEG00000019562	ppargc1a	90	90.303	ENSDARG00000067829	ppargc1a	87	90.303	Danio_rerio
ENSLBEG00000019562	ppargc1a	85	72.845	ENSDNOG00000041106	PPARGC1A	95	72.845	Dasypus_novemcinctus
ENSLBEG00000019562	ppargc1a	84	71.560	ENSDORG00000016276	Ppargc1a	94	71.560	Dipodomys_ordii
ENSLBEG00000019562	ppargc1a	85	71.983	ENSEASG00005007984	PPARGC1A	95	71.983	Equus_asinus_asinus
ENSLBEG00000019562	ppargc1a	81	74.886	ENSECAG00000009164	PPARGC1A	93	71.429	Equus_caballus
ENSLBEG00000019562	ppargc1a	85	70.485	ENSEEUG00000009219	PPARGC1A	91	76.042	Erinaceus_europaeus
ENSLBEG00000019562	ppargc1a	97	90.213	ENSELUG00000017027	ppargc1a	94	89.873	Esox_lucius
ENSLBEG00000019562	ppargc1a	84	74.429	ENSFCAG00000000043	PPARGC1A	94	74.429	Felis_catus
ENSLBEG00000019562	ppargc1a	83	74.641	ENSFALG00000009211	PPARGC1A	60	74.641	Ficedula_albicollis
ENSLBEG00000019562	ppargc1a	89	79.755	ENSFDAG00000005659	PPARGC1A	95	71.983	Fukomys_damarensis
ENSLBEG00000019562	ppargc1a	99	95.436	ENSFHEG00000021990	ppargc1a	96	95.436	Fundulus_heteroclitus
ENSLBEG00000019562	ppargc1a	89	82.927	ENSGALG00000042851	PPARGC1A	94	75.342	Gallus_gallus
ENSLBEG00000019562	ppargc1a	99	94.191	ENSGAFG00000015514	ppargc1a	98	94.191	Gambusia_affinis
ENSLBEG00000019562	ppargc1a	83	73.239	ENSGAGG00000007043	PPARGC1A	83	81.714	Gopherus_agassizii
ENSLBEG00000019562	ppargc1a	85	71.368	ENSGGOG00000009810	PPARGC1A	95	71.368	Gorilla_gorilla
ENSLBEG00000019562	ppargc1a	100	94.694	ENSHBUG00000005269	ppargc1a	98	96.721	Haplochromis_burtoni
ENSLBEG00000019562	ppargc1a	82	74.877	ENSHGLG00000007022	PPARGC1A	91	73.632	Heterocephalus_glaber_female
ENSLBEG00000019562	ppargc1a	84	74.886	ENSHGLG00100000133	PPARGC1A	92	72.906	Heterocephalus_glaber_male
ENSLBEG00000019562	ppargc1a	99	92.245	ENSHCOG00000014886	ppargc1a	92	92.946	Hippocampus_comes
ENSLBEG00000019562	ppargc1a	85	71.552	ENSSTOG00000012522	PPARGC1A	55	71.552	Ictidomys_tridecemlineatus
ENSLBEG00000019562	ppargc1a	99	95.102	ENSKMAG00000005390	ppargc1a	92	95.851	Kryptolebias_marmoratus
ENSLBEG00000019562	ppargc1a	89	82.474	ENSLACG00000014054	PPARGC1A	91	81.281	Latimeria_chalumnae
ENSLBEG00000019562	ppargc1a	58	45.223	ENSLOCG00000012195	ppargc1b	50	46.324	Lepisosteus_oculatus
ENSLBEG00000019562	ppargc1a	69	56.884	ENSLOCG00000012350	ppargc1a	94	81.405	Lepisosteus_oculatus
ENSLBEG00000019562	ppargc1a	84	74.886	ENSLAFG00000012981	PPARGC1A	96	71.983	Loxodonta_africana
ENSLBEG00000019562	ppargc1a	85	71.368	ENSMFAG00000000534	PPARGC1A	95	71.368	Macaca_fascicularis
ENSLBEG00000019562	ppargc1a	89	82.390	ENSMMUG00000001844	PPARGC1A	95	71.368	Macaca_mulatta
ENSLBEG00000019562	ppargc1a	83	73.934	ENSMNEG00000028682	PPARGC1A	95	71.368	Macaca_nemestrina
ENSLBEG00000019562	ppargc1a	84	74.208	ENSMLEG00000034233	PPARGC1A	95	71.368	Mandrillus_leucophaeus
ENSLBEG00000019562	ppargc1a	99	95.918	ENSMAMG00000005531	ppargc1a	92	95.918	Mastacembelus_armatus
ENSLBEG00000019562	ppargc1a	100	87.927	ENSMZEG00005001739	ppargc1a	78	89.764	Maylandia_zebra
ENSLBEG00000019562	ppargc1a	89	83.537	ENSMGAG00000012485	PPARGC1A	52	83.523	Meleagris_gallopavo
ENSLBEG00000019562	ppargc1a	100	55.361	ENSMAUG00000011811	Ppargc1a	95	71.552	Mesocricetus_auratus
ENSLBEG00000019562	ppargc1a	83	74.146	ENSMICG00000015390	PPARGC1A	96	70.940	Microcebus_murinus
ENSLBEG00000019562	ppargc1a	89	82.209	ENSMOCG00000008765	Ppargc1a	95	71.121	Microtus_ochrogaster
ENSLBEG00000019562	ppargc1a	99	95.102	ENSMMOG00000011847	ppargc1a	99	96.951	Mola_mola
ENSLBEG00000019562	ppargc1a	89	83.436	ENSMODG00000000549	PPARGC1A	65	83.523	Monodelphis_domestica
ENSLBEG00000019562	ppargc1a	100	95.918	ENSMALG00000004625	ppargc1a	89	95.918	Monopterus_albus
ENSLBEG00000019562	ppargc1a	86	68.313	MGP_CAROLIEiJ_G0027213	Ppargc1a	95	69.828	Mus_caroli
ENSLBEG00000019562	ppargc1a	86	69.136	ENSMUSG00000029167	Ppargc1a	95	70.690	Mus_musculus
ENSLBEG00000019562	ppargc1a	84	73.059	MGP_PahariEiJ_G0016995	Ppargc1a	94	73.059	Mus_pahari
ENSLBEG00000019562	ppargc1a	86	69.136	MGP_SPRETEiJ_G0028208	Ppargc1a	95	70.690	Mus_spretus
ENSLBEG00000019562	ppargc1a	84	74.886	ENSMLUG00000016307	PPARGC1A	99	52.299	Myotis_lucifugus
ENSLBEG00000019562	ppargc1a	84	73.516	ENSNGAG00000015090	Ppargc1a	94	73.516	Nannospalax_galili
ENSLBEG00000019562	ppargc1a	100	80.952	ENSNBRG00000023403	ppargc1a	98	96.266	Neolamprologus_brichardi
ENSLBEG00000019562	ppargc1a	85	71.368	ENSNLEG00000016760	PPARGC1A	55	71.368	Nomascus_leucogenys
ENSLBEG00000019562	ppargc1a	89	80.982	ENSOPRG00000012899	PPARGC1A	53	74.627	Ochotona_princeps
ENSLBEG00000019562	ppargc1a	85	90.830	ENSONIG00000007635	ppargc1a	96	87.137	Oreochromis_niloticus
ENSLBEG00000019562	ppargc1a	89	83.537	ENSOANG00000006680	PPARGC1A	51	83.523	Ornithorhynchus_anatinus
ENSLBEG00000019562	ppargc1a	89	81.595	ENSOCUG00000014668	PPARGC1A	53	75.124	Oryctolagus_cuniculus
ENSLBEG00000019562	ppargc1a	100	94.694	ENSORLG00000004788	ppargc1a	97	95.436	Oryzias_latipes
ENSLBEG00000019562	ppargc1a	100	94.694	ENSORLG00020014690	ppargc1a	92	95.436	Oryzias_latipes_hni
ENSLBEG00000019562	ppargc1a	100	94.286	ENSORLG00015012206	ppargc1a	99	97.368	Oryzias_latipes_hsok
ENSLBEG00000019562	ppargc1a	99	95.102	ENSOMEG00000000670	ppargc1a	98	95.851	Oryzias_melastigma
ENSLBEG00000019562	ppargc1a	85	70.513	ENSOGAG00000014559	PPARGC1A	95	70.513	Otolemur_garnettii
ENSLBEG00000019562	ppargc1a	85	72.414	ENSOARG00000005581	PPARGC1A	51	78.421	Ovis_aries
ENSLBEG00000019562	ppargc1a	85	70.940	ENSPPAG00000034694	PPARGC1A	96	70.940	Pan_paniscus
ENSLBEG00000019562	ppargc1a	84	74.429	ENSPPRG00000001711	PPARGC1A	94	74.429	Panthera_pardus
ENSLBEG00000019562	ppargc1a	84	74.429	ENSPTIG00000007378	PPARGC1A	94	74.429	Panthera_tigris_altaica
ENSLBEG00000019562	ppargc1a	85	71.368	ENSPTRG00000015954	PPARGC1A	96	71.368	Pan_troglodytes
ENSLBEG00000019562	ppargc1a	84	74.208	ENSPANG00000005420	PPARGC1A	95	71.368	Papio_anubis
ENSLBEG00000019562	ppargc1a	50	77.419	ENSPKIG00000002531	ppargc1a	69	72.034	Paramormyrops_kingsleyae
ENSLBEG00000019562	ppargc1a	71	53.285	ENSPSIG00000008358	PPARGC1B	52	52.174	Pelodiscus_sinensis
ENSLBEG00000019562	ppargc1a	84	74.886	ENSPSIG00000011790	PPARGC1A	65	82.386	Pelodiscus_sinensis
ENSLBEG00000019562	ppargc1a	100	73.090	ENSPMGG00000019204	ppargc1a	94	85.772	Periophthalmus_magnuspinnatus
ENSLBEG00000019562	ppargc1a	89	81.707	ENSPEMG00000010892	Ppargc1a	91	75.000	Peromyscus_maniculatus_bairdii
ENSLBEG00000019562	ppargc1a	84	76.256	ENSPCIG00000015835	PPARGC1A	65	82.386	Phascolarctos_cinereus
ENSLBEG00000019562	ppargc1a	98	95.417	ENSPFOG00000001263	ppargc1a	93	95.102	Poecilia_formosa
ENSLBEG00000019562	ppargc1a	91	87.961	ENSPLAG00000002827	ppargc1a	95	95.436	Poecilia_latipinna
ENSLBEG00000019562	ppargc1a	99	95.000	ENSPMEG00000000720	ppargc1a	96	91.608	Poecilia_mexicana
ENSLBEG00000019562	ppargc1a	99	95.436	ENSPREG00000019171	ppargc1a	98	95.436	Poecilia_reticulata
ENSLBEG00000019562	ppargc1a	85	71.368	ENSPPYG00000014640	PPARGC1A	95	71.368	Pongo_abelii
ENSLBEG00000019562	ppargc1a	84	75.229	ENSPCAG00000016308	PPARGC1A	96	71.983	Procavia_capensis
ENSLBEG00000019562	ppargc1a	84	73.756	ENSPCOG00000022858	PPARGC1A	95	70.940	Propithecus_coquereli
ENSLBEG00000019562	ppargc1a	100	55.673	ENSPVAG00000004965	PPARGC1A	94	75.342	Pteropus_vampyrus
ENSLBEG00000019562	ppargc1a	100	88.189	ENSPNYG00000006846	ppargc1a	95	96.266	Pundamilia_nyererei
ENSLBEG00000019562	ppargc1a	90	96.053	ENSPNAG00000010393	ppargc1a	99	96.053	Pygocentrus_nattereri
ENSLBEG00000019562	ppargc1a	86	69.136	ENSRNOG00000004473	Ppargc1a	95	70.690	Rattus_norvegicus
ENSLBEG00000019562	ppargc1a	85	71.368	ENSRBIG00000032333	PPARGC1A	55	71.368	Rhinopithecus_bieti
ENSLBEG00000019562	ppargc1a	85	71.368	ENSRROG00000010419	PPARGC1A	55	71.368	Rhinopithecus_roxellana
ENSLBEG00000019562	ppargc1a	85	71.368	ENSSBOG00000006423	PPARGC1A	95	71.368	Saimiri_boliviensis_boliviensis
ENSLBEG00000019562	ppargc1a	68	56.489	ENSSBOG00000028738	PPARGC1B	54	45.263	Saimiri_boliviensis_boliviensis
ENSLBEG00000019562	ppargc1a	50	78.857	ENSSFOG00015001633	ppargc1a	84	73.109	Scleropages_formosus
ENSLBEG00000019562	ppargc1a	86	71.193	ENSSFOG00015018522	ppargc1a	70	56.230	Scleropages_formosus
ENSLBEG00000019562	ppargc1a	100	96.327	ENSSMAG00000011571	ppargc1a	95	98.246	Scophthalmus_maximus
ENSLBEG00000019562	ppargc1a	88	98.707	ENSSDUG00000007408	ppargc1a	97	98.707	Seriola_dumerili
ENSLBEG00000019562	ppargc1a	87	97.177	ENSSLDG00000006987	ppargc1a	92	97.510	Seriola_lalandi_dorsalis
ENSLBEG00000019562	ppargc1a	89	81.600	ENSSARG00000000575	PPARGC1A	90	71.689	Sorex_araneus
ENSLBEG00000019562	ppargc1a	73	51.852	ENSSPUG00000019271	PPARGC1B	50	51.880	Sphenodon_punctatus
ENSLBEG00000019562	ppargc1a	98	95.652	ENSSPAG00000023514	ppargc1a	97	97.095	Stegastes_partitus
ENSLBEG00000019562	ppargc1a	85	72.414	ENSSSCG00000029275	PPARGC1A	53	78.947	Sus_scrofa
ENSLBEG00000019562	ppargc1a	85	72.414	ENSTGUG00000009487	PPARGC1A	63	72.414	Taeniopygia_guttata
ENSLBEG00000019562	ppargc1a	89	92.353	ENSTRUG00000007210	ppargc1a	84	93.373	Takifugu_rubripes
ENSLBEG00000019562	ppargc1a	85	71.983	ENSTTRG00000005327	PPARGC1A	80	82.927	Tursiops_truncatus
ENSLBEG00000019562	ppargc1a	84	81.595	ENSUAMG00000020843	PPARGC1A	78	82.286	Ursus_americanus
ENSLBEG00000019562	ppargc1a	87	82.209	ENSUMAG00000003557	PPARGC1A	80	82.286	Ursus_maritimus
ENSLBEG00000019562	ppargc1a	100	48.152	ENSVPAG00000003478	PPARGC1A	55	49.138	Vicugna_pacos
ENSLBEG00000019562	ppargc1a	85	72.414	ENSVVUG00000013365	PPARGC1A	95	72.414	Vulpes_vulpes
ENSLBEG00000019562	ppargc1a	84	73.973	ENSXETG00000020468	ppargc1a	50	78.977	Xenopus_tropicalis
ENSLBEG00000019562	ppargc1a	98	95.000	ENSXCOG00000004835	ppargc1a	93	95.021	Xiphophorus_couchianus
ENSLBEG00000019562	ppargc1a	99	94.583	ENSXMAG00000007748	ppargc1a	79	87.927	Xiphophorus_maculatus