EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000019782 (Gene tree)
Gene ID: 109995534
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6856 bases
Position: chrFKLU01000327.1:349214-356069
Accession: 109995534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000025949	zf-CCHC	PF00098.23	6.2e-08	1	1
ENSLBEP00000025949	RRM_5	PF13893.6	4.9e-07	1	1
ENSLBEP00000025949	RRM_1	PF00076.22	2.5e-29	1	2
ENSLBEP00000025949	RRM_1	PF00076.22	2.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000027240	-	4875	XM_020649285	ENSLBEP00000025949	415 (aa)	XP_020504941	UPI0009B4B7C2

Gene Model

Click here to download ENSLBEG00000019782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000019782	rbm4.1	65	54.667	ENSLBEG00000001071	-	100	49.351
ENSLBEG00000019782	rbm4.1	99	46.809	ENSLBEG00000019756	-	90	59.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019782	rbm4.1	100	85.986	ENSAPOG00000012353	rbm4.1	100	85.986	Acanthochromis_polyacanthus
ENSLBEG00000019782	rbm4.1	100	84.086	ENSACIG00000016482	rbm4.1	100	84.086	Amphilophus_citrinellus
ENSLBEG00000019782	rbm4.1	100	86.698	ENSAOCG00000010915	rbm4.1	100	86.698	Amphiprion_ocellaris
ENSLBEG00000019782	rbm4.1	100	86.698	ENSAPEG00000009494	rbm4.1	100	86.698	Amphiprion_percula
ENSLBEG00000019782	rbm4.1	100	85.748	ENSATEG00000001904	rbm4.1	100	85.748	Anabas_testudineus
ENSLBEG00000019782	rbm4.1	99	45.902	ENSACLG00000007740	-	99	44.495	Astatotilapia_calliptera
ENSLBEG00000019782	rbm4.1	100	84.561	ENSACLG00000007722	rbm4.1	100	84.561	Astatotilapia_calliptera
ENSLBEG00000019782	rbm4.1	100	60.520	ENSAMXG00000036611	rbm4.1	100	61.702	Astyanax_mexicanus
ENSLBEG00000019782	rbm4.1	99	47.765	ENSCSEG00000014359	-	99	48.037	Cynoglossus_semilaevis
ENSLBEG00000019782	rbm4.1	100	74.286	ENSCSEG00000014365	rbm4.1	100	74.286	Cynoglossus_semilaevis
ENSLBEG00000019782	rbm4.1	100	77.381	ENSCVAG00000019349	rbm4.1	100	77.381	Cyprinodon_variegatus
ENSLBEG00000019782	rbm4.1	100	51.508	ENSDARG00000055080	rbm4.2	100	50.922	Danio_rerio
ENSLBEG00000019782	rbm4.1	100	68.706	ENSDARG00000036386	rbm4.1	100	68.779	Danio_rerio
ENSLBEG00000019782	rbm4.1	100	63.679	ENSELUG00000013205	rbm4.1	100	63.023	Esox_lucius
ENSLBEG00000019782	rbm4.1	100	75.059	ENSFHEG00000022926	rbm4.1	100	75.059	Fundulus_heteroclitus
ENSLBEG00000019782	rbm4.1	92	49.109	ENSGMOG00000007455	-	99	48.499	Gadus_morhua
ENSLBEG00000019782	rbm4.1	100	66.667	ENSGMOG00000007464	rbm4.1	100	69.267	Gadus_morhua
ENSLBEG00000019782	rbm4.1	100	75.355	ENSGAFG00000019302	rbm4.1	100	75.355	Gambusia_affinis
ENSLBEG00000019782	rbm4.1	100	76.540	ENSGACG00000000822	rbm4.1	100	76.540	Gasterosteus_aculeatus
ENSLBEG00000019782	rbm4.1	99	46.336	ENSGACG00000000821	-	99	46.698	Gasterosteus_aculeatus
ENSLBEG00000019782	rbm4.1	100	84.561	ENSHBUG00000011610	rbm4.1	100	84.561	Haplochromis_burtoni
ENSLBEG00000019782	rbm4.1	96	68.966	ENSHCOG00000011403	rbm4.1	99	68.719	Hippocampus_comes
ENSLBEG00000019782	rbm4.1	100	49.176	ENSIPUG00000022937	rbm4.2	100	49.883	Ictalurus_punctatus
ENSLBEG00000019782	rbm4.1	100	61.187	ENSIPUG00000022931	rbm4.1	100	61.591	Ictalurus_punctatus
ENSLBEG00000019782	rbm4.1	100	75.355	ENSKMAG00000006556	rbm4.1	100	75.592	Kryptolebias_marmoratus
ENSLBEG00000019782	rbm4.1	100	85.986	ENSMAMG00000001765	rbm4.1	100	85.986	Mastacembelus_armatus
ENSLBEG00000019782	rbm4.1	97	49.403	ENSMAMG00000001760	-	98	47.319	Mastacembelus_armatus
ENSLBEG00000019782	rbm4.1	100	84.561	ENSMZEG00005009205	rbm4.1	100	84.561	Maylandia_zebra
ENSLBEG00000019782	rbm4.1	100	82.742	ENSMMOG00000020479	rbm4.1	100	82.742	Mola_mola
ENSLBEG00000019782	rbm4.1	99	47.072	ENSMALG00000020557	-	99	49.409	Monopterus_albus
ENSLBEG00000019782	rbm4.1	100	84.323	ENSMALG00000020544	rbm4.1	100	84.323	Monopterus_albus
ENSLBEG00000019782	rbm4.1	100	84.561	ENSNBRG00000017755	rbm4.1	100	84.561	Neolamprologus_brichardi
ENSLBEG00000019782	rbm4.1	100	84.323	ENSONIG00000015730	rbm4.1	100	84.323	Oreochromis_niloticus
ENSLBEG00000019782	rbm4.1	100	78.385	ENSORLG00000012496	rbm4.1	100	78.385	Oryzias_latipes
ENSLBEG00000019782	rbm4.1	100	78.385	ENSORLG00020012454	rbm4.1	100	78.385	Oryzias_latipes_hni
ENSLBEG00000019782	rbm4.1	100	78.385	ENSORLG00015013678	rbm4.1	100	78.385	Oryzias_latipes_hsok
ENSLBEG00000019782	rbm4.1	100	78.385	ENSOMEG00000001001	rbm4.1	100	78.385	Oryzias_melastigma
ENSLBEG00000019782	rbm4.1	100	62.295	ENSPKIG00000020805	rbm4.1	100	62.763	Paramormyrops_kingsleyae
ENSLBEG00000019782	rbm4.1	99	46.890	ENSPFOG00000012685	-	99	45.585	Poecilia_formosa
ENSLBEG00000019782	rbm4.1	100	75.592	ENSPFOG00000012675	rbm4.1	100	75.592	Poecilia_formosa
ENSLBEG00000019782	rbm4.1	100	75.592	ENSPLAG00000018572	rbm4.1	100	75.592	Poecilia_latipinna
ENSLBEG00000019782	rbm4.1	100	75.592	ENSPMEG00000006290	rbm4.1	100	75.592	Poecilia_mexicana
ENSLBEG00000019782	rbm4.1	100	75.592	ENSPREG00000003724	rbm4.1	100	75.592	Poecilia_reticulata
ENSLBEG00000019782	rbm4.1	99	44.762	ENSPREG00000003764	-	96	65.241	Poecilia_reticulata
ENSLBEG00000019782	rbm4.1	100	84.561	ENSPNYG00000004662	rbm4.1	100	84.561	Pundamilia_nyererei
ENSLBEG00000019782	rbm4.1	100	67.290	ENSPNAG00000002539	rbm4.1	100	67.056	Pygocentrus_nattereri
ENSLBEG00000019782	rbm4.1	100	51.515	ENSPNAG00000013057	rbm4.2	100	50.812	Pygocentrus_nattereri
ENSLBEG00000019782	rbm4.1	100	62.529	ENSSFOG00015021996	sf1	100	62.295	Scleropages_formosus
ENSLBEG00000019782	rbm4.1	100	80.714	ENSSMAG00000007571	rbm4.1	100	80.000	Scophthalmus_maximus
ENSLBEG00000019782	rbm4.1	100	86.936	ENSSDUG00000003925	rbm4.1	100	86.936	Seriola_dumerili
ENSLBEG00000019782	rbm4.1	99	48.941	ENSSDUG00000003936	-	99	48.174	Seriola_dumerili
ENSLBEG00000019782	rbm4.1	100	86.936	ENSSLDG00000013147	rbm4.1	100	86.936	Seriola_lalandi_dorsalis
ENSLBEG00000019782	rbm4.1	99	47.754	ENSSLDG00000013157	-	99	48.730	Seriola_lalandi_dorsalis
ENSLBEG00000019782	rbm4.1	100	85.308	ENSSPAG00000019053	rbm4.1	100	86.493	Stegastes_partitus
ENSLBEG00000019782	rbm4.1	99	47.242	ENSSPAG00000019046	-	99	45.747	Stegastes_partitus
ENSLBEG00000019782	rbm4.1	100	76.960	ENSTRUG00000013334	rbm4.1	100	76.722	Takifugu_rubripes
ENSLBEG00000019782	rbm4.1	99	46.081	ENSTRUG00000013328	-	99	43.649	Takifugu_rubripes
ENSLBEG00000019782	rbm4.1	78	88.725	ENSTNIG00000004821	rbm4.1	97	91.753	Tetraodon_nigroviridis
ENSLBEG00000019782	rbm4.1	100	75.118	ENSXCOG00000003731	rbm4.1	100	75.118	Xiphophorus_couchianus
ENSLBEG00000019782	rbm4.1	99	46.556	ENSXMAG00000008059	-	99	46.009	Xiphophorus_maculatus
ENSLBEG00000019782	rbm4.1	100	75.355	ENSXMAG00000008069	rbm4.1	100	75.355	Xiphophorus_maculatus