EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000019951 (Gene tree)
Gene ID: 109996654
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6108 bases
Position: chrFKLU01000377.1:135097-141204
Accession: 109996654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000026194	zf-C2H2	PF00096.26	5.8e-29	1	6
ENSLBEP00000026194	zf-C2H2	PF00096.26	5.8e-29	2	6
ENSLBEP00000026194	zf-C2H2	PF00096.26	5.8e-29	3	6
ENSLBEP00000026194	zf-C2H2	PF00096.26	5.8e-29	4	6
ENSLBEP00000026194	zf-C2H2	PF00096.26	5.8e-29	5	6
ENSLBEP00000026194	zf-C2H2	PF00096.26	5.8e-29	6	6
ENSLBEP00000026194	zf-met	PF12874.7	2.3e-13	1	2
ENSLBEP00000026194	zf-met	PF12874.7	2.3e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000027488	-	3443	XM_020650898	ENSLBEP00000026194	1089 (aa)	XP_020506554	UPI0009B3D1F3

Gene Model

Click here to download ENSLBEG00000019951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000019951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000019951	sall4	58	38.158	ENSLBEG00000024509	-	95	41.791
ENSLBEG00000019951	sall4	54	35.366	ENSLBEG00000028243	-	80	46.809
ENSLBEG00000019951	sall4	88	63.462	ENSLBEG00000005152	sall3a	90	38.095
ENSLBEG00000019951	sall4	56	52.830	ENSLBEG00000013570	-	97	53.061
ENSLBEG00000019951	sall4	67	65.385	ENSLBEG00000015706	sall3b	91	65.385
ENSLBEG00000019951	sall4	89	72.973	ENSLBEG00000012207	sall1a	65	72.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000019951	sall4	100	44.444	ENSG00000101115	SALL4	100	53.333	Homo_sapiens
ENSLBEG00000019951	sall4	100	79.652	ENSAPOG00000002465	sall4	100	79.743	Acanthochromis_polyacanthus
ENSLBEG00000019951	sall4	100	44.454	ENSAMEG00000013250	-	99	45.929	Ailuropoda_melanoleuca
ENSLBEG00000019951	sall4	100	77.177	ENSACIG00000017298	sall4	100	77.177	Amphilophus_citrinellus
ENSLBEG00000019951	sall4	100	80.293	ENSAOCG00000023678	sall4	100	80.477	Amphiprion_ocellaris
ENSLBEG00000019951	sall4	100	80.293	ENSAPEG00000000751	sall4	100	80.477	Amphiprion_percula
ENSLBEG00000019951	sall4	100	82.844	ENSATEG00000024480	sall4	100	82.844	Anabas_testudineus
ENSLBEG00000019951	sall4	100	49.912	ENSAPLG00000006498	SALL4	100	50.616	Anas_platyrhynchos
ENSLBEG00000019951	sall4	100	50.825	ENSACAG00000012748	SALL4	100	51.384	Anolis_carolinensis
ENSLBEG00000019951	sall4	100	44.212	ENSANAG00000023352	SALL4	100	44.174	Aotus_nancymaae
ENSLBEG00000019951	sall4	100	77.473	ENSACLG00000017851	sall4	100	77.473	Astatotilapia_calliptera
ENSLBEG00000019951	sall4	99	64.870	ENSAMXG00000001254	sall4	99	65.229	Astyanax_mexicanus
ENSLBEG00000019951	sall4	100	42.646	ENSBTAG00000003101	SALL4	100	42.857	Bos_taurus
ENSLBEG00000019951	sall4	80	46.009	ENSCJAG00000000591	SALL4	97	46.188	Callithrix_jacchus
ENSLBEG00000019951	sall4	100	45.004	ENSCAFG00000011738	-	100	44.944	Canis_familiaris
ENSLBEG00000019951	sall4	100	44.917	ENSCAFG00020021870	SALL4	100	44.857	Canis_lupus_dingo
ENSLBEG00000019951	sall4	100	41.910	ENSCHIG00000026270	SALL4	100	42.151	Capra_hircus
ENSLBEG00000019951	sall4	100	43.429	ENSTSYG00000007359	SALL4	100	51.667	Carlito_syrichta
ENSLBEG00000019951	sall4	97	43.744	ENSCAPG00000012135	SALL4	95	43.796	Cavia_aperea
ENSLBEG00000019951	sall4	100	40.611	ENSCCAG00000029512	-	100	62.000	Cebus_capucinus
ENSLBEG00000019951	sall4	100	44.541	ENSCATG00000030757	SALL4	100	44.764	Cercocebus_atys
ENSLBEG00000019951	sall4	100	43.864	ENSCLAG00000010479	SALL4	100	44.348	Chinchilla_lanigera
ENSLBEG00000019951	sall4	100	44.192	ENSCSAG00000015269	SALL4	100	44.415	Chlorocebus_sabaeus
ENSLBEG00000019951	sall4	99	51.550	ENSCPBG00000014995	SALL4	99	51.651	Chrysemys_picta_bellii
ENSLBEG00000019951	sall4	100	44.454	ENSCANG00000036463	SALL4	100	44.677	Colobus_angolensis_palliatus
ENSLBEG00000019951	sall4	100	42.597	ENSCGRG00001019569	Sall4	100	46.619	Cricetulus_griseus_chok1gshd
ENSLBEG00000019951	sall4	100	42.424	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSLBEG00000019951	sall4	100	78.832	ENSCSEG00000014604	sall4	100	78.832	Cynoglossus_semilaevis
ENSLBEG00000019951	sall4	100	75.894	ENSCVAG00000010815	sall4	100	76.077	Cyprinodon_variegatus
ENSLBEG00000019951	sall4	99	63.816	ENSDARG00000044485	sall4	99	63.816	Danio_rerio
ENSLBEG00000019951	sall4	100	44.041	ENSDNOG00000040633	SALL4	100	43.917	Dasypus_novemcinctus
ENSLBEG00000019951	sall4	100	42.325	ENSDORG00000012841	Sall4	100	73.171	Dipodomys_ordii
ENSLBEG00000019951	sall4	73	55.556	ENSETEG00000012475	-	58	55.556	Echinops_telfairi
ENSLBEG00000019951	sall4	65	52.174	ENSEBUG00000015425	-	100	56.897	Eptatretus_burgeri
ENSLBEG00000019951	sall4	100	45.134	ENSECAG00000018533	SALL4	100	45.043	Equus_caballus
ENSLBEG00000019951	sall4	100	44.049	ENSEEUG00000003649	SALL4	99	42.633	Erinaceus_europaeus
ENSLBEG00000019951	sall4	100	65.691	ENSELUG00000005696	sall4	100	65.691	Esox_lucius
ENSLBEG00000019951	sall4	100	44.714	ENSFCAG00000002822	SALL4	100	44.828	Felis_catus
ENSLBEG00000019951	sall4	100	49.124	ENSFALG00000013149	SALL4	100	50.175	Ficedula_albicollis
ENSLBEG00000019951	sall4	100	43.057	ENSFDAG00000017812	SALL4	100	43.657	Fukomys_damarensis
ENSLBEG00000019951	sall4	100	75.297	ENSFHEG00000014187	sall4	100	75.297	Fundulus_heteroclitus
ENSLBEG00000019951	sall4	100	69.772	ENSGMOG00000003822	sall4	100	69.863	Gadus_morhua
ENSLBEG00000019951	sall4	100	50.176	ENSGALG00000041365	SALL4	100	51.099	Gallus_gallus
ENSLBEG00000019951	sall4	100	76.740	ENSGAFG00000019925	sall4	100	77.381	Gambusia_affinis
ENSLBEG00000019951	sall4	100	77.078	ENSGACG00000011124	sall4	100	77.078	Gasterosteus_aculeatus
ENSLBEG00000019951	sall4	99	51.416	ENSGAGG00000002297	SALL4	100	51.370	Gopherus_agassizii
ENSLBEG00000019951	sall4	100	44.309	ENSGGOG00000001832	SALL4	100	44.396	Gorilla_gorilla
ENSLBEG00000019951	sall4	100	77.839	ENSHBUG00000007327	sall4	100	77.839	Haplochromis_burtoni
ENSLBEG00000019951	sall4	97	44.312	ENSHGLG00000009043	SALL4	95	43.945	Heterocephalus_glaber_female
ENSLBEG00000019951	sall4	97	44.312	ENSHGLG00100002722	SALL4	95	43.945	Heterocephalus_glaber_male
ENSLBEG00000019951	sall4	100	77.127	ENSHCOG00000008519	sall4	100	77.127	Hippocampus_comes
ENSLBEG00000019951	sall4	99	64.551	ENSIPUG00000019170	sall4	99	64.642	Ictalurus_punctatus
ENSLBEG00000019951	sall4	61	54.902	ENSSTOG00000025002	SALL4	100	83.099	Ictidomys_tridecemlineatus
ENSLBEG00000019951	sall4	100	44.194	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSLBEG00000019951	sall4	100	77.706	ENSKMAG00000002501	sall4	100	78.532	Kryptolebias_marmoratus
ENSLBEG00000019951	sall4	96	47.922	ENSLACG00000013898	SALL4	99	65.169	Latimeria_chalumnae
ENSLBEG00000019951	sall4	100	61.490	ENSLOCG00000002427	sall4	100	61.664	Lepisosteus_oculatus
ENSLBEG00000019951	sall4	100	43.860	ENSLAFG00000004309	SALL4	100	43.766	Loxodonta_africana
ENSLBEG00000019951	sall4	100	44.764	ENSMFAG00000027169	SALL4	100	44.852	Macaca_fascicularis
ENSLBEG00000019951	sall4	93	44.540	ENSMMUG00000003870	SALL4	100	56.931	Macaca_mulatta
ENSLBEG00000019951	sall4	93	44.540	ENSMNEG00000035995	SALL4	92	46.162	Macaca_nemestrina
ENSLBEG00000019951	sall4	100	44.629	ENSMLEG00000030467	SALL4	100	44.716	Mandrillus_leucophaeus
ENSLBEG00000019951	sall4	100	80.654	ENSMAMG00000005223	sall4	100	80.654	Mastacembelus_armatus
ENSLBEG00000019951	sall4	100	77.381	ENSMZEG00005023418	sall4	100	77.381	Maylandia_zebra
ENSLBEG00000019951	sall4	75	63.462	ENSMGAG00000009344	SALL4	99	63.462	Meleagris_gallopavo
ENSLBEG00000019951	sall4	100	43.030	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSLBEG00000019951	sall4	100	44.182	ENSMICG00000000027	SALL4	100	44.357	Microcebus_murinus
ENSLBEG00000019951	sall4	100	43.594	ENSMOCG00000018245	Sall4	100	82.192	Microtus_ochrogaster
ENSLBEG00000019951	sall4	100	81.376	ENSMMOG00000014929	sall4	100	81.376	Mola_mola
ENSLBEG00000019951	sall4	99	46.544	ENSMODG00000016387	SALL4	97	47.028	Monodelphis_domestica
ENSLBEG00000019951	sall4	100	82.676	ENSMALG00000018709	sall4	100	82.952	Monopterus_albus
ENSLBEG00000019951	sall4	100	42.710	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSLBEG00000019951	sall4	100	43.227	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSLBEG00000019951	sall4	100	41.952	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSLBEG00000019951	sall4	100	42.746	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSLBEG00000019951	sall4	100	43.955	ENSMPUG00000017543	SALL4	96	43.847	Mustela_putorius_furo
ENSLBEG00000019951	sall4	99	35.077	ENSMLUG00000028073	-	99	34.751	Myotis_lucifugus
ENSLBEG00000019951	sall4	97	43.716	ENSMLUG00000007060	-	98	43.693	Myotis_lucifugus
ENSLBEG00000019951	sall4	100	41.287	ENSMLUG00000008405	-	100	41.166	Myotis_lucifugus
ENSLBEG00000019951	sall4	100	43.490	ENSNGAG00000017833	Sall4	100	43.467	Nannospalax_galili
ENSLBEG00000019951	sall4	100	78.185	ENSNBRG00000001829	sall4	100	78.185	Neolamprologus_brichardi
ENSLBEG00000019951	sall4	100	44.279	ENSNLEG00000007013	SALL4	100	44.367	Nomascus_leucogenys
ENSLBEG00000019951	sall4	84	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSLBEG00000019951	sall4	100	43.490	ENSOPRG00000011640	SALL4	100	43.663	Ochotona_princeps
ENSLBEG00000019951	sall4	100	78.480	ENSONIG00000016557	sall4	100	78.755	Oreochromis_niloticus
ENSLBEG00000019951	sall4	100	50.753	ENSOANG00000008667	SALL4	97	50.749	Ornithorhynchus_anatinus
ENSLBEG00000019951	sall4	97	45.194	ENSOCUG00000011797	SALL4	98	45.194	Oryctolagus_cuniculus
ENSLBEG00000019951	sall4	100	73.810	ENSORLG00000016130	sall4	100	74.634	Oryzias_latipes
ENSLBEG00000019951	sall4	100	73.901	ENSORLG00020007339	sall4	100	74.725	Oryzias_latipes_hni
ENSLBEG00000019951	sall4	100	73.810	ENSORLG00015002265	sall4	100	74.634	Oryzias_latipes_hsok
ENSLBEG00000019951	sall4	100	74.634	ENSOMEG00000017344	sall4	100	75.458	Oryzias_melastigma
ENSLBEG00000019951	sall4	97	45.630	ENSOGAG00000013799	SALL4	99	45.622	Otolemur_garnettii
ENSLBEG00000019951	sall4	100	41.028	ENSOARG00000014570	SALL4	100	41.064	Ovis_aries
ENSLBEG00000019951	sall4	100	44.164	ENSPPAG00000038064	SALL4	100	44.251	Pan_paniscus
ENSLBEG00000019951	sall4	100	43.842	ENSPPRG00000008677	SALL4	100	43.966	Panthera_pardus
ENSLBEG00000019951	sall4	100	44.357	ENSPTRG00000013631	SALL4	100	44.444	Pan_troglodytes
ENSLBEG00000019951	sall4	93	44.540	ENSPANG00000021792	SALL4	92	46.162	Papio_anubis
ENSLBEG00000019951	sall4	100	62.681	ENSPKIG00000007074	sall4	100	62.862	Paramormyrops_kingsleyae
ENSLBEG00000019951	sall4	99	50.972	ENSPSIG00000009066	SALL4	100	51.237	Pelodiscus_sinensis
ENSLBEG00000019951	sall4	100	66.911	ENSPMGG00000022551	sall4	100	66.484	Periophthalmus_magnuspinnatus
ENSLBEG00000019951	sall4	100	42.795	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSLBEG00000019951	sall4	99	48.345	ENSPCIG00000022838	SALL4	97	48.825	Phascolarctos_cinereus
ENSLBEG00000019951	sall4	100	76.832	ENSPFOG00000001442	sall4	100	76.832	Poecilia_formosa
ENSLBEG00000019951	sall4	100	76.740	ENSPLAG00000008760	sall4	100	76.740	Poecilia_latipinna
ENSLBEG00000019951	sall4	100	77.015	ENSPMEG00000008497	sall4	100	77.015	Poecilia_mexicana
ENSLBEG00000019951	sall4	100	76.465	ENSPREG00000021140	sall4	100	76.465	Poecilia_reticulata
ENSLBEG00000019951	sall4	100	44.406	ENSPPYG00000011138	SALL4	100	44.493	Pongo_abelii
ENSLBEG00000019951	sall4	100	42.583	ENSPCAG00000004726	SALL4	99	42.895	Procavia_capensis
ENSLBEG00000019951	sall4	100	43.979	ENSPCOG00000016321	SALL4	100	44.328	Propithecus_coquereli
ENSLBEG00000019951	sall4	94	43.068	ENSPVAG00000002075	SALL4	94	43.016	Pteropus_vampyrus
ENSLBEG00000019951	sall4	100	77.819	ENSPNYG00000021738	sall4	100	77.819	Pundamilia_nyererei
ENSLBEG00000019951	sall4	99	65.032	ENSPNAG00000020929	sall4	99	65.245	Pygocentrus_nattereri
ENSLBEG00000019951	sall4	100	43.456	ENSRNOG00000050035	Sall4	100	43.553	Rattus_norvegicus
ENSLBEG00000019951	sall4	100	44.454	ENSRBIG00000039876	SALL4	100	44.377	Rhinopithecus_bieti
ENSLBEG00000019951	sall4	100	44.454	ENSRROG00000036585	SALL4	100	44.512	Rhinopithecus_roxellana
ENSLBEG00000019951	sall4	100	44.425	ENSSBOG00000030011	SALL4	100	44.425	Saimiri_boliviensis_boliviensis
ENSLBEG00000019951	sall4	99	59.615	ENSSHAG00000018013	SALL4	94	59.615	Sarcophilus_harrisii
ENSLBEG00000019951	sall4	100	62.081	ENSSFOG00015021075	sall4	100	62.172	Scleropages_formosus
ENSLBEG00000019951	sall4	100	83.410	ENSSMAG00000019218	sall4	99	83.410	Scophthalmus_maximus
ENSLBEG00000019951	sall4	100	84.495	ENSSDUG00000004657	sall4	100	84.495	Seriola_dumerili
ENSLBEG00000019951	sall4	100	84.220	ENSSLDG00000004973	sall4	100	84.220	Seriola_lalandi_dorsalis
ENSLBEG00000019951	sall4	100	81.760	ENSSPAG00000001978	sall4	100	81.760	Stegastes_partitus
ENSLBEG00000019951	sall4	100	43.106	ENSSSCG00000007479	SALL4	100	42.782	Sus_scrofa
ENSLBEG00000019951	sall4	100	78.846	ENSTRUG00000007410	sall4	100	78.846	Takifugu_rubripes
ENSLBEG00000019951	sall4	100	77.269	ENSTNIG00000012460	sall4	100	77.452	Tetraodon_nigroviridis
ENSLBEG00000019951	sall4	97	42.818	ENSTTRG00000007753	SALL4	99	42.909	Tursiops_truncatus
ENSLBEG00000019951	sall4	100	44.271	ENSUAMG00000010113	SALL4	100	44.338	Ursus_americanus
ENSLBEG00000019951	sall4	98	44.444	ENSUMAG00000024274	SALL4	99	44.444	Ursus_maritimus
ENSLBEG00000019951	sall4	100	48.729	ENSXETG00000012326	sall4	100	48.981	Xenopus_tropicalis
ENSLBEG00000019951	sall4	100	69.442	ENSXCOG00000015467	sall4	100	69.991	Xiphophorus_couchianus
ENSLBEG00000019951	sall4	100	68.847	ENSXMAG00000012692	sall4	100	69.391	Xiphophorus_maculatus