EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020172 (Gene tree)
Gene ID: 109980633
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8761 bases
Position: chrFKLU01000023.1:268744-277504
Accession: 109980633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000026532	dsrm	PF00035.26	8.1e-45	1	4
ENSLBEP00000026532	dsrm	PF00035.26	8.1e-45	2	4
ENSLBEP00000026532	dsrm	PF00035.26	8.1e-45	3	4
ENSLBEP00000026532	dsrm	PF00035.26	8.1e-45	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000027830	-	2424	XM_020629082	ENSLBEP00000026532	691 (aa)	XP_020484738	UPI0009B418F3

Gene Model

Click here to download ENSLBEG00000020172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020172	stau1	84	49.180	ENSLBEG00000014492	stau2	97	46.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020172	stau1	96	69.871	ENSG00000124214	STAU1	99	72.332	Homo_sapiens
ENSLBEG00000020172	stau1	100	93.054	ENSAPOG00000017260	stau1	100	93.054	Acanthochromis_polyacanthus
ENSLBEG00000020172	stau1	99	67.330	ENSAMEG00000013681	STAU1	99	67.330	Ailuropoda_melanoleuca
ENSLBEG00000020172	stau1	100	89.870	ENSACIG00000015918	stau1	100	90.883	Amphilophus_citrinellus
ENSLBEG00000020172	stau1	100	93.632	ENSAOCG00000012224	stau1	100	93.632	Amphiprion_ocellaris
ENSLBEG00000020172	stau1	100	93.632	ENSAPEG00000012308	stau1	100	93.632	Amphiprion_percula
ENSLBEG00000020172	stau1	100	92.950	ENSATEG00000024600	stau1	100	92.950	Anabas_testudineus
ENSLBEG00000020172	stau1	99	70.523	ENSAPLG00000010527	STAU1	100	70.426	Anas_platyrhynchos
ENSLBEG00000020172	stau1	99	71.127	ENSACAG00000015909	STAU1	99	71.027	Anolis_carolinensis
ENSLBEG00000020172	stau1	96	68.921	ENSANAG00000032714	STAU1	99	68.921	Aotus_nancymaae
ENSLBEG00000020172	stau1	100	91.223	ENSACLG00000012270	stau1	100	91.223	Astatotilapia_calliptera
ENSLBEG00000020172	stau1	85	80.550	ENSAMXG00000016812	stau1	98	80.550	Astyanax_mexicanus
ENSLBEG00000020172	stau1	96	69.501	ENSBTAG00000000241	STAU1	99	69.501	Bos_taurus
ENSLBEG00000020172	stau1	98	68.223	ENSCJAG00000016233	STAU1	99	69.686	Callithrix_jacchus
ENSLBEG00000020172	stau1	96	69.316	ENSCAFG00000011347	STAU1	99	67.878	Canis_familiaris
ENSLBEG00000020172	stau1	96	67.878	ENSCAFG00020017123	STAU1	99	71.429	Canis_lupus_dingo
ENSLBEG00000020172	stau1	96	69.501	ENSCHIG00000001799	-	99	69.501	Capra_hircus
ENSLBEG00000020172	stau1	93	69.850	ENSTSYG00000036179	-	99	69.850	Carlito_syrichta
ENSLBEG00000020172	stau1	72	71.315	ENSCAPG00000017041	STAU1	99	71.116	Cavia_aperea
ENSLBEG00000020172	stau1	71	69.109	ENSCPOG00000005566	STAU1	99	69.109	Cavia_porcellus
ENSLBEG00000020172	stau1	96	68.921	ENSCCAG00000034339	STAU1	99	68.921	Cebus_capucinus
ENSLBEG00000020172	stau1	96	73.876	ENSCATG00000028474	STAU1	99	73.876	Cercocebus_atys
ENSLBEG00000020172	stau1	71	71.683	ENSCLAG00000006516	-	99	71.683	Chinchilla_lanigera
ENSLBEG00000020172	stau1	72	59.281	ENSCLAG00000002784	-	100	59.281	Chinchilla_lanigera
ENSLBEG00000020172	stau1	72	72.530	ENSCSAG00000014986	STAU1	99	72.530	Chlorocebus_sabaeus
ENSLBEG00000020172	stau1	96	70.111	ENSCHOG00000001511	STAU1	99	70.111	Choloepus_hoffmanni
ENSLBEG00000020172	stau1	100	71.027	ENSCPBG00000026741	STAU1	100	71.027	Chrysemys_picta_bellii
ENSLBEG00000020172	stau1	96	70.055	ENSCANG00000039220	STAU1	99	70.055	Colobus_angolensis_palliatus
ENSLBEG00000020172	stau1	71	67.525	ENSCGRG00001013453	Stau1	99	67.525	Cricetulus_griseus_chok1gshd
ENSLBEG00000020172	stau1	71	67.525	ENSCGRG00000007216	Stau1	99	67.525	Cricetulus_griseus_crigri
ENSLBEG00000020172	stau1	100	77.465	ENSCSEG00000000792	stau1	100	78.451	Cynoglossus_semilaevis
ENSLBEG00000020172	stau1	93	82.213	ENSCVAG00000005906	stau1	99	83.432	Cyprinodon_variegatus
ENSLBEG00000020172	stau1	100	78.499	ENSDARG00000044182	stau1	100	78.807	Danio_rerio
ENSLBEG00000020172	stau1	96	70.111	ENSDNOG00000014933	STAU1	97	69.926	Dasypus_novemcinctus
ENSLBEG00000020172	stau1	71	70.942	ENSDORG00000030220	Stau1	99	70.942	Dipodomys_ordii
ENSLBEG00000020172	stau1	67	73.179	ENSETEG00000018235	STAU1	80	73.179	Echinops_telfairi
ENSLBEG00000020172	stau1	96	69.104	ENSEASG00005023343	STAU1	99	69.104	Equus_asinus_asinus
ENSLBEG00000020172	stau1	96	69.871	ENSECAG00000012894	STAU1	99	69.871	Equus_caballus
ENSLBEG00000020172	stau1	57	74.873	ENSEEUG00000014344	STAU1	68	74.873	Erinaceus_europaeus
ENSLBEG00000020172	stau1	99	82.102	ENSELUG00000002529	stau1	99	83.594	Esox_lucius
ENSLBEG00000020172	stau1	96	70.240	ENSFCAG00000001447	STAU1	99	70.240	Felis_catus
ENSLBEG00000020172	stau1	100	70.922	ENSFALG00000012940	STAU1	100	70.922	Ficedula_albicollis
ENSLBEG00000020172	stau1	72	54.473	ENSFDAG00000020837	-	99	54.473	Fukomys_damarensis
ENSLBEG00000020172	stau1	71	71.485	ENSFDAG00000014119	-	99	71.485	Fukomys_damarensis
ENSLBEG00000020172	stau1	99	87.464	ENSFHEG00000013517	stau1	100	87.338	Fundulus_heteroclitus
ENSLBEG00000020172	stau1	100	72.370	ENSGMOG00000016850	stau1	100	72.370	Gadus_morhua
ENSLBEG00000020172	stau1	100	72.482	ENSGALG00000004736	STAU1	100	72.482	Gallus_gallus
ENSLBEG00000020172	stau1	100	88.058	ENSGAFG00000010437	stau1	100	88.058	Gambusia_affinis
ENSLBEG00000020172	stau1	100	91.618	ENSGACG00000001352	stau1	100	91.618	Gasterosteus_aculeatus
ENSLBEG00000020172	stau1	100	71.773	ENSGAGG00000009825	STAU1	100	71.773	Gopherus_agassizii
ENSLBEG00000020172	stau1	93	64.117	ENSGGOG00000025351	STAU1	99	74.725	Gorilla_gorilla
ENSLBEG00000020172	stau1	100	91.079	ENSHBUG00000023668	stau1	100	91.079	Haplochromis_burtoni
ENSLBEG00000020172	stau1	71	72.345	ENSHGLG00000008730	STAU1	99	72.345	Heterocephalus_glaber_female
ENSLBEG00000020172	stau1	71	72.345	ENSHGLG00100000098	STAU1	99	72.345	Heterocephalus_glaber_male
ENSLBEG00000020172	stau1	100	83.764	ENSHCOG00000018461	stau1	100	83.764	Hippocampus_comes
ENSLBEG00000020172	stau1	100	74.819	ENSIPUG00000023725	stau1	100	74.819	Ictalurus_punctatus
ENSLBEG00000020172	stau1	71	71.343	ENSSTOG00000003634	STAU1	99	71.343	Ictidomys_tridecemlineatus
ENSLBEG00000020172	stau1	71	70.741	ENSJJAG00000020032	Stau1	99	70.741	Jaculus_jaculus
ENSLBEG00000020172	stau1	99	85.528	ENSKMAG00000007135	stau1	99	86.107	Kryptolebias_marmoratus
ENSLBEG00000020172	stau1	98	72.206	ENSLACG00000016157	STAU1	97	72.206	Latimeria_chalumnae
ENSLBEG00000020172	stau1	99	77.089	ENSLOCG00000003134	stau1	100	77.842	Lepisosteus_oculatus
ENSLBEG00000020172	stau1	74	72.447	ENSLAFG00000003238	STAU1	99	72.447	Loxodonta_africana
ENSLBEG00000020172	stau1	96	73.876	ENSMFAG00000040931	STAU1	99	74.074	Macaca_fascicularis
ENSLBEG00000020172	stau1	93	63.934	ENSMMUG00000002302	STAU1	99	74.074	Macaca_mulatta
ENSLBEG00000020172	stau1	96	72.939	ENSMNEG00000033821	STAU1	99	72.939	Macaca_nemestrina
ENSLBEG00000020172	stau1	96	70.055	ENSMLEG00000031383	STAU1	99	70.055	Mandrillus_leucophaeus
ENSLBEG00000020172	stau1	100	93.488	ENSMAMG00000017586	stau1	100	93.488	Mastacembelus_armatus
ENSLBEG00000020172	stau1	100	91.210	ENSMZEG00005015605	stau1	100	91.210	Maylandia_zebra
ENSLBEG00000020172	stau1	99	70.248	ENSMGAG00000004719	STAU1	100	70.151	Meleagris_gallopavo
ENSLBEG00000020172	stau1	71	67.525	ENSMAUG00000013846	Stau1	99	67.525	Mesocricetus_auratus
ENSLBEG00000020172	stau1	96	68.373	ENSMICG00000001995	STAU1	99	68.373	Microcebus_murinus
ENSLBEG00000020172	stau1	71	68.119	ENSMOCG00000018743	Stau1	99	68.119	Microtus_ochrogaster
ENSLBEG00000020172	stau1	100	88.278	ENSMMOG00000015455	stau1	100	88.278	Mola_mola
ENSLBEG00000020172	stau1	96	71.723	ENSMODG00000016276	STAU1	99	71.723	Monodelphis_domestica
ENSLBEG00000020172	stau1	100	91.606	ENSMALG00000000045	stau1	100	91.606	Monopterus_albus
ENSLBEG00000020172	stau1	71	68.889	MGP_CAROLIEiJ_G0024699	Stau1	99	68.889	Mus_caroli
ENSLBEG00000020172	stau1	71	68.687	ENSMUSG00000039536	Stau1	99	68.687	Mus_musculus
ENSLBEG00000020172	stau1	71	68.136	MGP_PahariEiJ_G0026141	Stau1	99	68.136	Mus_pahari
ENSLBEG00000020172	stau1	71	68.687	MGP_SPRETEiJ_G0025619	Stau1	99	68.687	Mus_spretus
ENSLBEG00000020172	stau1	96	68.981	ENSMPUG00000017581	STAU1	99	68.981	Mustela_putorius_furo
ENSLBEG00000020172	stau1	96	68.762	ENSMLUG00000008407	STAU1	97	68.762	Myotis_lucifugus
ENSLBEG00000020172	stau1	71	69.505	ENSNGAG00000007108	Stau1	99	69.505	Nannospalax_galili
ENSLBEG00000020172	stau1	100	91.079	ENSNBRG00000017596	stau1	100	91.079	Neolamprologus_brichardi
ENSLBEG00000020172	stau1	96	69.686	ENSNLEG00000006955	STAU1	99	71.289	Nomascus_leucogenys
ENSLBEG00000020172	stau1	67	77.538	ENSMEUG00000003263	STAU1	80	77.538	Notamacropus_eugenii
ENSLBEG00000020172	stau1	77	67.897	ENSOPRG00000014569	STAU1	93	67.897	Ochotona_princeps
ENSLBEG00000020172	stau1	72	71.937	ENSODEG00000006523	STAU1	99	71.937	Octodon_degus
ENSLBEG00000020172	stau1	100	88.671	ENSONIG00000004152	stau1	99	88.671	Oreochromis_niloticus
ENSLBEG00000020172	stau1	100	69.633	ENSOANG00000006394	STAU1	100	69.633	Ornithorhynchus_anatinus
ENSLBEG00000020172	stau1	93	69.373	ENSOCUG00000006214	STAU1	99	69.373	Oryctolagus_cuniculus
ENSLBEG00000020172	stau1	99	86.667	ENSOMEG00000002388	stau1	99	86.667	Oryzias_melastigma
ENSLBEG00000020172	stau1	96	70.787	ENSOGAG00000002127	STAU1	97	70.787	Otolemur_garnettii
ENSLBEG00000020172	stau1	72	50.297	ENSOGAG00000028222	-	99	49.802	Otolemur_garnettii
ENSLBEG00000020172	stau1	96	69.501	ENSOARG00000012204	STAU1	99	68.722	Ovis_aries
ENSLBEG00000020172	stau1	93	63.934	ENSPPAG00000032023	STAU1	99	74.725	Pan_paniscus
ENSLBEG00000020172	stau1	96	70.425	ENSPPRG00000003436	STAU1	99	72.727	Panthera_pardus
ENSLBEG00000020172	stau1	96	70.425	ENSPTIG00000011768	STAU1	99	71.680	Panthera_tigris_altaica
ENSLBEG00000020172	stau1	93	63.934	ENSPTRG00000023130	STAU1	99	74.725	Pan_troglodytes
ENSLBEG00000020172	stau1	96	73.876	ENSPANG00000020560	STAU1	99	73.876	Papio_anubis
ENSLBEG00000020172	stau1	100	78.602	ENSPKIG00000024588	stau1	100	79.173	Paramormyrops_kingsleyae
ENSLBEG00000020172	stau1	100	72.057	ENSPSIG00000010731	STAU1	99	72.199	Pelodiscus_sinensis
ENSLBEG00000020172	stau1	100	84.935	ENSPMGG00000018553	stau1	100	84.935	Periophthalmus_magnuspinnatus
ENSLBEG00000020172	stau1	71	67.921	ENSPEMG00000022045	Stau1	99	67.921	Peromyscus_maniculatus_bairdii
ENSLBEG00000020172	stau1	99	69.731	ENSPCIG00000023269	STAU1	98	73.896	Phascolarctos_cinereus
ENSLBEG00000020172	stau1	100	86.638	ENSPFOG00000017253	stau1	100	86.638	Poecilia_formosa
ENSLBEG00000020172	stau1	57	84.539	ENSPLAG00000014829	stau1	97	82.776	Poecilia_latipinna
ENSLBEG00000020172	stau1	100	83.190	ENSPMEG00000007495	stau1	100	83.190	Poecilia_mexicana
ENSLBEG00000020172	stau1	100	87.069	ENSPREG00000003477	stau1	100	87.069	Poecilia_reticulata
ENSLBEG00000020172	stau1	96	69.444	ENSPPYG00000011111	STAU1	99	69.444	Pongo_abelii
ENSLBEG00000020172	stau1	73	63.851	ENSPCAG00000002459	STAU1	100	63.851	Procavia_capensis
ENSLBEG00000020172	stau1	96	69.501	ENSPCOG00000027746	STAU1	99	71.094	Propithecus_coquereli
ENSLBEG00000020172	stau1	66	75.166	ENSPVAG00000015019	STAU1	86	75.166	Pteropus_vampyrus
ENSLBEG00000020172	stau1	100	91.079	ENSPNYG00000014436	stau1	100	91.079	Pundamilia_nyererei
ENSLBEG00000020172	stau1	100	78.273	ENSPNAG00000011323	stau1	100	79.281	Pygocentrus_nattereri
ENSLBEG00000020172	stau1	71	67.723	ENSRNOG00000007781	Stau1	99	67.723	Rattus_norvegicus
ENSLBEG00000020172	stau1	72	71.795	ENSRBIG00000037345	STAU1	100	71.598	Rhinopithecus_bieti
ENSLBEG00000020172	stau1	96	72.939	ENSRROG00000039008	STAU1	99	72.939	Rhinopithecus_roxellana
ENSLBEG00000020172	stau1	96	68.921	ENSSBOG00000034448	STAU1	99	69.094	Saimiri_boliviensis_boliviensis
ENSLBEG00000020172	stau1	96	72.458	ENSSHAG00000009492	STAU1	99	71.576	Sarcophilus_harrisii
ENSLBEG00000020172	stau1	100	79.053	ENSSFOG00015021497	stau1	100	79.053	Scleropages_formosus
ENSLBEG00000020172	stau1	100	92.185	ENSSMAG00000017410	stau1	100	92.185	Scophthalmus_maximus
ENSLBEG00000020172	stau1	100	94.211	ENSSDUG00000019439	stau1	100	94.211	Seriola_dumerili
ENSLBEG00000020172	stau1	100	94.356	ENSSLDG00000025040	stau1	100	94.356	Seriola_lalandi_dorsalis
ENSLBEG00000020172	stau1	100	71.027	ENSSPUG00000017983	STAU1	99	71.554	Sphenodon_punctatus
ENSLBEG00000020172	stau1	100	94.645	ENSSPAG00000019275	stau1	100	94.645	Stegastes_partitus
ENSLBEG00000020172	stau1	96	69.871	ENSSSCG00000027444	STAU1	99	72.906	Sus_scrofa
ENSLBEG00000020172	stau1	100	68.861	ENSTGUG00000008784	STAU1	100	68.861	Taeniopygia_guttata
ENSLBEG00000020172	stau1	100	87.050	ENSTRUG00000005837	stau1	100	87.626	Takifugu_rubripes
ENSLBEG00000020172	stau1	97	85.778	ENSTNIG00000014732	stau1	99	85.778	Tetraodon_nigroviridis
ENSLBEG00000020172	stau1	96	59.779	ENSTBEG00000009404	STAU1	99	59.779	Tupaia_belangeri
ENSLBEG00000020172	stau1	67	71.706	ENSTTRG00000004285	STAU1	80	71.706	Tursiops_truncatus
ENSLBEG00000020172	stau1	72	71.345	ENSUAMG00000025449	STAU1	99	71.345	Ursus_americanus
ENSLBEG00000020172	stau1	55	68.895	ENSUMAG00000024475	STAU1	89	68.895	Ursus_maritimus
ENSLBEG00000020172	stau1	96	70.055	ENSVPAG00000001313	STAU1	99	70.055	Vicugna_pacos
ENSLBEG00000020172	stau1	96	68.023	ENSVVUG00000022325	STAU1	99	68.023	Vulpes_vulpes
ENSLBEG00000020172	stau1	96	70.772	ENSXETG00000001783	stau1	96	70.963	Xenopus_tropicalis
ENSLBEG00000020172	stau1	54	85.791	ENSXCOG00000008804	stau1	98	83.290	Xiphophorus_couchianus
ENSLBEG00000020172	stau1	99	87.608	ENSXMAG00000016175	stau1	100	87.482	Xiphophorus_maculatus