EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000020238 (Gene tree)
Gene ID: 110003109
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 17255 bases
Position: chrFKLU01001133.1:21780-39034
Accession: 110003109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000026595	TRM13	PF05206.14	1.1e-81	1	1
ENSLBEP00000026595	zf-U11-48K	PF05253.12	2.7e-09	1	1
ENSLBEP00000026595	zf-TRM13_CCCH	PF11722.8	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000027893	-	6105	XM_020658804	ENSLBEP00000026595	463 (aa)	XP_020514460	UPI0009B38D3C

Gene Model

Click here to download ENSLBEG00000020238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020238	trmt13	99	51.148	ENSG00000122435	TRMT13	87	64.211	Homo_sapiens
ENSLBEG00000020238	trmt13	99	69.758	ENSAPOG00000015131	trmt13	99	71.811	Acanthochromis_polyacanthus
ENSLBEG00000020238	trmt13	99	50.418	ENSAMEG00000008917	TRMT13	96	50.418	Ailuropoda_melanoleuca
ENSLBEG00000020238	trmt13	99	70.323	ENSACIG00000005804	trmt13	96	67.880	Amphilophus_citrinellus
ENSLBEG00000020238	trmt13	99	71.605	ENSAOCG00000023585	trmt13	99	71.605	Amphiprion_ocellaris
ENSLBEG00000020238	trmt13	99	72.016	ENSAPEG00000004025	trmt13	99	72.016	Amphiprion_percula
ENSLBEG00000020238	trmt13	99	71.800	ENSATEG00000006597	trmt13	96	71.800	Anabas_testudineus
ENSLBEG00000020238	trmt13	90	50.465	ENSAPLG00000014924	TRMT13	98	50.465	Anas_platyrhynchos
ENSLBEG00000020238	trmt13	99	51.915	ENSACAG00000003498	TRMT13	97	51.915	Anolis_carolinensis
ENSLBEG00000020238	trmt13	99	51.357	ENSANAG00000019525	TRMT13	87	64.211	Aotus_nancymaae
ENSLBEG00000020238	trmt13	99	72.845	ENSACLG00000020018	trmt13	99	72.845	Astatotilapia_calliptera
ENSLBEG00000020238	trmt13	99	52.720	ENSAMXG00000017963	trmt13	98	52.174	Astyanax_mexicanus
ENSLBEG00000020238	trmt13	99	50.208	ENSBTAG00000015781	TRMT13	96	49.896	Bos_taurus
ENSLBEG00000020238	trmt13	99	50.622	ENSCJAG00000000200	TRMT13	86	64.211	Callithrix_jacchus
ENSLBEG00000020238	trmt13	66	47.988	ENSCAFG00000020021	TRMT13	97	47.516	Canis_familiaris
ENSLBEG00000020238	trmt13	58	54.982	ENSCAFG00020011572	TRMT13	90	54.982	Canis_lupus_dingo
ENSLBEG00000020238	trmt13	99	50.312	ENSCHIG00000015395	TRMT13	96	50.000	Capra_hircus
ENSLBEG00000020238	trmt13	99	49.263	ENSTSYG00000010811	TRMT13	88	65.169	Carlito_syrichta
ENSLBEG00000020238	trmt13	77	39.335	ENSCAPG00000009085	TRMT13	96	40.166	Cavia_aperea
ENSLBEG00000020238	trmt13	99	50.740	ENSCPOG00000000694	TRMT13	95	50.959	Cavia_porcellus
ENSLBEG00000020238	trmt13	99	51.357	ENSCCAG00000023772	TRMT13	87	64.211	Cebus_capucinus
ENSLBEG00000020238	trmt13	99	51.357	ENSCATG00000033556	TRMT13	87	65.263	Cercocebus_atys
ENSLBEG00000020238	trmt13	91	50.000	ENSCLAG00000008220	TRMT13	99	49.767	Chinchilla_lanigera
ENSLBEG00000020238	trmt13	99	51.357	ENSCSAG00000001506	TRMT13	96	50.943	Chlorocebus_sabaeus
ENSLBEG00000020238	trmt13	100	52.421	ENSCPBG00000026671	TRMT13	97	51.992	Chrysemys_picta_bellii
ENSLBEG00000020238	trmt13	99	51.148	ENSCANG00000034659	TRMT13	87	64.211	Colobus_angolensis_palliatus
ENSLBEG00000020238	trmt13	99	51.458	ENSCGRG00001021601	Trmt13	95	50.943	Cricetulus_griseus_chok1gshd
ENSLBEG00000020238	trmt13	52	49.027	ENSCGRG00000000093	-	97	48.638	Cricetulus_griseus_crigri
ENSLBEG00000020238	trmt13	99	66.738	ENSCSEG00000000591	trmt13	98	65.665	Cynoglossus_semilaevis
ENSLBEG00000020238	trmt13	99	69.742	ENSCVAG00000017342	trmt13	94	69.742	Cyprinodon_variegatus
ENSLBEG00000020238	trmt13	99	53.978	ENSDARG00000102846	trmt13	97	53.548	Danio_rerio
ENSLBEG00000020238	trmt13	58	54.909	ENSDNOG00000001710	TRMT13	80	54.909	Dasypus_novemcinctus
ENSLBEG00000020238	trmt13	98	50.105	ENSDORG00000015808	Trmt13	96	50.000	Dipodomys_ordii
ENSLBEG00000020238	trmt13	99	32.845	FBgn0037435	CG18048	95	33.473	Drosophila_melanogaster
ENSLBEG00000020238	trmt13	99	45.062	ENSETEG00000005819	TRMT13	97	44.742	Echinops_telfairi
ENSLBEG00000020238	trmt13	98	42.553	ENSEBUG00000014444	trmt13	96	41.970	Eptatretus_burgeri
ENSLBEG00000020238	trmt13	99	50.522	ENSEASG00005015918	TRMT13	96	50.209	Equus_asinus_asinus
ENSLBEG00000020238	trmt13	99	50.104	ENSECAG00000022626	TRMT13	96	49.791	Equus_caballus
ENSLBEG00000020238	trmt13	78	53.448	ENSEEUG00000000294	TRMT13	73	53.448	Erinaceus_europaeus
ENSLBEG00000020238	trmt13	99	55.297	ENSELUG00000003803	trmt13	98	55.932	Esox_lucius
ENSLBEG00000020238	trmt13	99	50.104	ENSFCAG00000030618	TRMT13	98	52.113	Felis_catus
ENSLBEG00000020238	trmt13	98	51.073	ENSFALG00000002424	TRMT13	95	51.073	Ficedula_albicollis
ENSLBEG00000020238	trmt13	99	50.000	ENSFDAG00000006342	TRMT13	96	50.000	Fukomys_damarensis
ENSLBEG00000020238	trmt13	84	71.429	ENSFHEG00000022954	trmt13	99	71.359	Fundulus_heteroclitus
ENSLBEG00000020238	trmt13	98	54.585	ENSGMOG00000013223	trmt13	100	53.780	Gadus_morhua
ENSLBEG00000020238	trmt13	98	51.183	ENSGALG00000005290	TRMT13	96	51.812	Gallus_gallus
ENSLBEG00000020238	trmt13	80	67.024	ENSGAFG00000001577	trmt13	81	66.488	Gambusia_affinis
ENSLBEG00000020238	trmt13	100	75.594	ENSGACG00000013428	trmt13	98	77.106	Gasterosteus_aculeatus
ENSLBEG00000020238	trmt13	100	51.891	ENSGAGG00000023303	TRMT13	96	57.609	Gopherus_agassizii
ENSLBEG00000020238	trmt13	99	50.939	ENSGGOG00000005616	TRMT13	87	64.211	Gorilla_gorilla
ENSLBEG00000020238	trmt13	99	72.845	ENSHBUG00000007754	trmt13	99	72.845	Haplochromis_burtoni
ENSLBEG00000020238	trmt13	99	50.209	ENSHGLG00000002164	TRMT13	96	50.209	Heterocephalus_glaber_female
ENSLBEG00000020238	trmt13	99	50.209	ENSHGLG00100001618	TRMT13	96	50.209	Heterocephalus_glaber_male
ENSLBEG00000020238	trmt13	100	54.873	ENSHCOG00000020553	trmt13	99	54.449	Hippocampus_comes
ENSLBEG00000020238	trmt13	99	53.731	ENSIPUG00000024787	trmt13	98	53.961	Ictalurus_punctatus
ENSLBEG00000020238	trmt13	99	50.209	ENSSTOG00000013483	TRMT13	96	49.895	Ictidomys_tridecemlineatus
ENSLBEG00000020238	trmt13	99	49.895	ENSJJAG00000018012	Trmt13	97	49.580	Jaculus_jaculus
ENSLBEG00000020238	trmt13	71	64.350	ENSKMAG00000007639	trmt13	99	62.763	Kryptolebias_marmoratus
ENSLBEG00000020238	trmt13	99	53.945	ENSLACG00000013153	TRMT13	98	53.586	Latimeria_chalumnae
ENSLBEG00000020238	trmt13	99	53.814	ENSLOCG00000000418	trmt13	97	54.008	Lepisosteus_oculatus
ENSLBEG00000020238	trmt13	78	48.294	ENSLAFG00000002383	TRMT13	98	48.148	Loxodonta_africana
ENSLBEG00000020238	trmt13	99	51.775	ENSMFAG00000034681	TRMT13	87	64.211	Macaca_fascicularis
ENSLBEG00000020238	trmt13	99	51.775	ENSMMUG00000004243	TRMT13	87	64.211	Macaca_mulatta
ENSLBEG00000020238	trmt13	99	51.775	ENSMNEG00000036102	TRMT13	87	64.211	Macaca_nemestrina
ENSLBEG00000020238	trmt13	99	50.939	ENSMLEG00000034258	TRMT13	87	63.158	Mandrillus_leucophaeus
ENSLBEG00000020238	trmt13	99	75.764	ENSMAMG00000016597	trmt13	96	75.492	Mastacembelus_armatus
ENSLBEG00000020238	trmt13	99	72.629	ENSMZEG00005020959	trmt13	99	72.629	Maylandia_zebra
ENSLBEG00000020238	trmt13	91	51.276	ENSMGAG00000006970	TRMT13	99	51.508	Meleagris_gallopavo
ENSLBEG00000020238	trmt13	99	50.625	ENSMAUG00000010448	Trmt13	96	50.625	Mesocricetus_auratus
ENSLBEG00000020238	trmt13	99	50.731	ENSMICG00000005283	TRMT13	87	62.105	Microcebus_murinus
ENSLBEG00000020238	trmt13	99	52.092	ENSMOCG00000019914	Trmt13	96	51.681	Microtus_ochrogaster
ENSLBEG00000020238	trmt13	59	66.544	ENSMMOG00000007762	trmt13	90	66.544	Mola_mola
ENSLBEG00000020238	trmt13	100	48.548	ENSMODG00000003646	TRMT13	97	48.548	Monodelphis_domestica
ENSLBEG00000020238	trmt13	100	69.612	ENSMALG00000020965	trmt13	97	69.612	Monopterus_albus
ENSLBEG00000020238	trmt13	99	50.840	MGP_CAROLIEiJ_G0025568	Trmt13	79	70.000	Mus_caroli
ENSLBEG00000020238	trmt13	99	51.148	ENSMUSG00000033439	Trmt13	75	72.917	Mus_musculus
ENSLBEG00000020238	trmt13	100	50.830	MGP_PahariEiJ_G0027014	Trmt13	83	67.308	Mus_pahari
ENSLBEG00000020238	trmt13	99	51.566	MGP_SPRETEiJ_G0026518	Trmt13	75	72.917	Mus_spretus
ENSLBEG00000020238	trmt13	79	47.200	ENSMPUG00000002078	-	96	47.312	Mustela_putorius_furo
ENSLBEG00000020238	trmt13	99	50.420	ENSMLUG00000002124	TRMT13	95	50.316	Myotis_lucifugus
ENSLBEG00000020238	trmt13	99	67.888	ENSNBRG00000006783	trmt13	98	67.888	Neolamprologus_brichardi
ENSLBEG00000020238	trmt13	99	50.939	ENSNLEG00000035917	TRMT13	87	64.211	Nomascus_leucogenys
ENSLBEG00000020238	trmt13	53	45.968	ENSMEUG00000013346	-	95	45.968	Notamacropus_eugenii
ENSLBEG00000020238	trmt13	67	56.818	ENSOPRG00000012048	TRMT13	63	56.818	Ochotona_princeps
ENSLBEG00000020238	trmt13	99	72.845	ENSONIG00000004574	trmt13	99	72.845	Oreochromis_niloticus
ENSLBEG00000020238	trmt13	92	51.454	ENSOANG00000012057	TRMT13	98	50.905	Ornithorhynchus_anatinus
ENSLBEG00000020238	trmt13	99	50.943	ENSOCUG00000023095	TRMT13	96	50.526	Oryctolagus_cuniculus
ENSLBEG00000020238	trmt13	100	62.607	ENSORLG00000003320	trmt13	99	62.687	Oryzias_latipes
ENSLBEG00000020238	trmt13	99	65.066	ENSORLG00020005972	trmt13	97	64.410	Oryzias_latipes_hni
ENSLBEG00000020238	trmt13	100	69.462	ENSORLG00015002270	trmt13	99	69.462	Oryzias_latipes_hsok
ENSLBEG00000020238	trmt13	99	70.563	ENSOMEG00000006724	trmt13	94	70.626	Oryzias_melastigma
ENSLBEG00000020238	trmt13	99	50.837	ENSOGAG00000005618	TRMT13	94	50.417	Otolemur_garnettii
ENSLBEG00000020238	trmt13	99	50.312	ENSOARG00000017983	TRMT13	96	50.000	Ovis_aries
ENSLBEG00000020238	trmt13	99	51.148	ENSPPAG00000043736	TRMT13	87	64.211	Pan_paniscus
ENSLBEG00000020238	trmt13	99	50.104	ENSPPRG00000003424	TRMT13	98	52.113	Panthera_pardus
ENSLBEG00000020238	trmt13	99	50.104	ENSPTIG00000018598	TRMT13	98	52.113	Panthera_tigris_altaica
ENSLBEG00000020238	trmt13	99	51.148	ENSPTRG00000001001	TRMT13	87	64.211	Pan_troglodytes
ENSLBEG00000020238	trmt13	99	51.148	ENSPANG00000007598	TRMT13	87	64.211	Papio_anubis
ENSLBEG00000020238	trmt13	100	54.274	ENSPKIG00000001514	trmt13	99	53.419	Paramormyrops_kingsleyae
ENSLBEG00000020238	trmt13	89	51.049	ENSPSIG00000012703	TRMT13	99	50.350	Pelodiscus_sinensis
ENSLBEG00000020238	trmt13	99	60.991	ENSPMGG00000013298	trmt13	94	60.991	Periophthalmus_magnuspinnatus
ENSLBEG00000020238	trmt13	99	51.261	ENSPEMG00000000275	Trmt13	95	51.363	Peromyscus_maniculatus_bairdii
ENSLBEG00000020238	trmt13	99	47.228	ENSPMAG00000000823	trmt13	98	47.023	Petromyzon_marinus
ENSLBEG00000020238	trmt13	99	49.380	ENSPCIG00000007699	TRMT13	97	49.482	Phascolarctos_cinereus
ENSLBEG00000020238	trmt13	99	64.009	ENSPFOG00000008675	trmt13	96	63.578	Poecilia_formosa
ENSLBEG00000020238	trmt13	99	65.161	ENSPLAG00000009709	trmt13	100	64.731	Poecilia_latipinna
ENSLBEG00000020238	trmt13	99	65.161	ENSPMEG00000022954	trmt13	100	64.731	Poecilia_mexicana
ENSLBEG00000020238	trmt13	80	68.901	ENSPREG00000005645	trmt13	92	64.413	Poecilia_reticulata
ENSLBEG00000020238	trmt13	99	51.050	ENSPPYG00000001120	TRMT13	95	50.633	Pongo_abelii
ENSLBEG00000020238	trmt13	99	49.375	ENSPCAG00000002340	TRMT13	96	49.266	Procavia_capensis
ENSLBEG00000020238	trmt13	99	50.524	ENSPCOG00000017984	TRMT13	87	62.105	Propithecus_coquereli
ENSLBEG00000020238	trmt13	99	50.313	ENSPVAG00000017430	TRMT13	96	50.000	Pteropus_vampyrus
ENSLBEG00000020238	trmt13	99	69.397	ENSPNYG00000013690	trmt13	99	69.397	Pundamilia_nyererei
ENSLBEG00000020238	trmt13	99	53.291	ENSPNAG00000022130	trmt13	98	53.205	Pygocentrus_nattereri
ENSLBEG00000020238	trmt13	99	51.143	ENSRNOG00000015140	Trmt13	93	50.947	Rattus_norvegicus
ENSLBEG00000020238	trmt13	99	51.148	ENSRBIG00000037686	TRMT13	87	64.211	Rhinopithecus_bieti
ENSLBEG00000020238	trmt13	99	51.148	ENSRROG00000044057	TRMT13	87	64.211	Rhinopithecus_roxellana
ENSLBEG00000020238	trmt13	99	51.148	ENSSBOG00000026541	TRMT13	87	64.211	Saimiri_boliviensis_boliviensis
ENSLBEG00000020238	trmt13	92	49.666	ENSSHAG00000005213	TRMT13	95	49.438	Sarcophilus_harrisii
ENSLBEG00000020238	trmt13	100	54.255	ENSSFOG00015017560	trmt13	98	54.430	Scleropages_formosus
ENSLBEG00000020238	trmt13	99	73.276	ENSSMAG00000014592	trmt13	96	71.121	Scophthalmus_maximus
ENSLBEG00000020238	trmt13	99	75.159	ENSSDUG00000015508	trmt13	96	74.262	Seriola_dumerili
ENSLBEG00000020238	trmt13	99	75.316	ENSSLDG00000019060	trmt13	97	74.207	Seriola_lalandi_dorsalis
ENSLBEG00000020238	trmt13	100	46.502	ENSSARG00000010344	TRMT13	99	45.756	Sorex_araneus
ENSLBEG00000020238	trmt13	98	51.288	ENSSPUG00000016339	TRMT13	99	51.168	Sphenodon_punctatus
ENSLBEG00000020238	trmt13	99	74.074	ENSSPAG00000011922	trmt13	99	73.866	Stegastes_partitus
ENSLBEG00000020238	trmt13	99	50.837	ENSSSCG00000006869	TRMT13	96	50.524	Sus_scrofa
ENSLBEG00000020238	trmt13	99	51.702	ENSTGUG00000005253	TRMT13	98	51.702	Taeniopygia_guttata
ENSLBEG00000020238	trmt13	98	66.882	ENSTRUG00000008400	trmt13	99	66.102	Takifugu_rubripes
ENSLBEG00000020238	trmt13	89	40.094	ENSTBEG00000008911	TRMT13	99	38.771	Tupaia_belangeri
ENSLBEG00000020238	trmt13	99	48.218	ENSUAMG00000017251	TRMT13	96	48.218	Ursus_americanus
ENSLBEG00000020238	trmt13	99	50.628	ENSUMAG00000007901	TRMT13	99	49.661	Ursus_maritimus
ENSLBEG00000020238	trmt13	91	39.773	ENSVPAG00000001034	TRMT13	98	39.408	Vicugna_pacos
ENSLBEG00000020238	trmt13	99	50.630	ENSVVUG00000021996	TRMT13	95	50.316	Vulpes_vulpes
ENSLBEG00000020238	trmt13	99	51.820	ENSXETG00000013204	trmt13	97	51.502	Xenopus_tropicalis
ENSLBEG00000020238	trmt13	99	63.656	ENSXMAG00000010765	trmt13	100	63.011	Xiphophorus_maculatus