EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020297 (Gene tree)
Gene ID: 109985697
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4673 bases
Position: chrFKLU01000085.1:1609837-1614509
Accession: 109985697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000026701	zf-C2H2	PF00096.26	1.6e-26	1	5
ENSLBEP00000026701	zf-C2H2	PF00096.26	1.6e-26	2	5
ENSLBEP00000026701	zf-C2H2	PF00096.26	1.6e-26	3	5
ENSLBEP00000026701	zf-C2H2	PF00096.26	1.6e-26	4	5
ENSLBEP00000026701	zf-C2H2	PF00096.26	1.6e-26	5	5
ENSLBEP00000026719	zf-C2H2	PF00096.26	1.9e-25	1	5
ENSLBEP00000026719	zf-C2H2	PF00096.26	1.9e-25	2	5
ENSLBEP00000026719	zf-C2H2	PF00096.26	1.9e-25	3	5
ENSLBEP00000026719	zf-C2H2	PF00096.26	1.9e-25	4	5
ENSLBEP00000026719	zf-C2H2	PF00096.26	1.9e-25	5	5
ENSLBEP00000026719	zf-met	PF12874.7	1e-08	1	2
ENSLBEP00000026719	zf-met	PF12874.7	1e-08	2	2
ENSLBEP00000026701	zf-met	PF12874.7	1.9e-08	1	2
ENSLBEP00000026701	zf-met	PF12874.7	1.9e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000027999	-	1706	XM_020636090	ENSLBEP00000026701	333 (aa)	XP_020491746	UPI0009B30B46
ENSLBET00000028017	-	957	-	ENSLBEP00000026719	318 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000020297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020297	gfi1b	50	44.792	ENSLBEG00000008909	-	72	44.792
ENSLBEG00000020297	gfi1b	82	31.502	ENSLBEG00000017726	-	84	31.502
ENSLBEG00000020297	gfi1b	53	42.169	ENSLBEG00000024458	-	72	42.169
ENSLBEG00000020297	gfi1b	54	43.678	ENSLBEG00000009580	-	69	43.678
ENSLBEG00000020297	gfi1b	58	32.683	ENSLBEG00000027993	-	73	32.683
ENSLBEG00000020297	gfi1b	57	43.750	ENSLBEG00000017450	-	97	43.750
ENSLBEG00000020297	gfi1b	53	41.250	ENSLBEG00000011289	-	57	41.250
ENSLBEG00000020297	gfi1b	96	38.983	ENSLBEG00000020747	-	90	38.983
ENSLBEG00000020297	gfi1b	76	43.038	ENSLBEG00000011145	si:cabz01071911.3	75	43.038
ENSLBEG00000020297	gfi1b	88	42.105	ENSLBEG00000024509	-	99	42.105
ENSLBEG00000020297	gfi1b	95	38.824	ENSLBEG00000008689	-	84	40.113
ENSLBEG00000020297	gfi1b	53	43.750	ENSLBEG00000008850	-	53	45.324
ENSLBEG00000020297	gfi1b	56	41.912	ENSLBEG00000026552	-	51	41.912
ENSLBEG00000020297	gfi1b	53	41.463	ENSLBEG00000011250	-	60	39.752
ENSLBEG00000020297	gfi1b	54	40.845	ENSLBEG00000007251	-	86	40.351
ENSLBEG00000020297	gfi1b	54	40.828	ENSLBEG00000018970	-	78	40.828
ENSLBEG00000020297	gfi1b	54	38.608	ENSLBEG00000025689	-	67	38.608
ENSLBEG00000020297	gfi1b	51	38.318	ENSLBEG00000022059	-	75	38.318
ENSLBEG00000020297	gfi1b	67	44.304	ENSLBEG00000011588	-	99	44.304
ENSLBEG00000020297	gfi1b	61	37.857	ENSLBEG00000005729	znf652	91	37.857
ENSLBEG00000020297	gfi1b	58	37.500	ENSLBEG00000008320	-	64	34.503
ENSLBEG00000020297	gfi1b	53	37.857	ENSLBEG00000028271	-	77	37.857
ENSLBEG00000020297	gfi1b	67	36.842	ENSLBEG00000026457	-	97	40.708
ENSLBEG00000020297	gfi1b	62	35.329	ENSLBEG00000012151	zbtb48	51	35.329
ENSLBEG00000020297	gfi1b	63	42.857	ENSLBEG00000008606	-	93	42.857
ENSLBEG00000020297	gfi1b	54	41.420	ENSLBEG00000028243	-	82	41.420
ENSLBEG00000020297	gfi1b	53	43.636	ENSLBEG00000000435	-	72	43.636
ENSLBEG00000020297	gfi1b	53	42.138	ENSLBEG00000025696	-	61	42.138
ENSLBEG00000020297	gfi1b	55	42.197	ENSLBEG00000011986	-	88	42.197
ENSLBEG00000020297	gfi1b	53	44.340	ENSLBEG00000022939	-	52	44.340
ENSLBEG00000020297	gfi1b	67	35.652	ENSLBEG00000011006	-	53	40.541
ENSLBEG00000020297	gfi1b	53	42.857	ENSLBEG00000024737	-	95	40.625
ENSLBEG00000020297	gfi1b	56	33.758	ENSLBEG00000025305	-	89	33.758
ENSLBEG00000020297	gfi1b	65	45.902	ENSLBEG00000001756	-	85	45.902
ENSLBEG00000020297	gfi1b	57	33.594	ENSLBEG00000014195	-	51	34.375
ENSLBEG00000020297	gfi1b	63	43.119	ENSLBEG00000001132	-	79	43.119
ENSLBEG00000020297	gfi1b	58	44.086	ENSLBEG00000005307	znf236	57	44.086
ENSLBEG00000020297	gfi1b	63	42.667	ENSLBEG00000014263	-	51	42.667
ENSLBEG00000020297	gfi1b	60	40.237	ENSLBEG00000000369	-	90	40.237
ENSLBEG00000020297	gfi1b	81	41.420	ENSLBEG00000000373	-	77	41.420
ENSLBEG00000020297	gfi1b	54	44.521	ENSLBEG00000014211	-	87	44.521
ENSLBEG00000020297	gfi1b	76	37.589	ENSLBEG00000013235	-	96	37.589
ENSLBEG00000020297	gfi1b	55	40.876	ENSLBEG00000007837	-	92	40.876
ENSLBEG00000020297	gfi1b	67	42.017	ENSLBEG00000014282	-	85	42.017
ENSLBEG00000020297	gfi1b	51	41.935	ENSLBEG00000024536	-	85	41.935
ENSLBEG00000020297	gfi1b	54	38.849	ENSLBEG00000007106	-	62	38.849
ENSLBEG00000020297	gfi1b	53	39.053	ENSLBEG00000012201	-	59	39.053
ENSLBEG00000020297	gfi1b	53	42.500	ENSLBEG00000011349	-	66	42.500
ENSLBEG00000020297	gfi1b	81	43.333	ENSLBEG00000020461	-	66	43.333
ENSLBEG00000020297	gfi1b	56	40.556	ENSLBEG00000028628	znf1174	51	40.782
ENSLBEG00000020297	gfi1b	63	38.406	ENSLBEG00000006161	-	72	38.406
ENSLBEG00000020297	gfi1b	86	40.179	ENSLBEG00000010132	-	63	40.217
ENSLBEG00000020297	gfi1b	53	49.153	ENSLBEG00000002278	-	70	41.935
ENSLBEG00000020297	gfi1b	58	37.838	ENSLBEG00000024454	-	50	37.838
ENSLBEG00000020297	gfi1b	53	43.671	ENSLBEG00000004805	-	91	43.671
ENSLBEG00000020297	gfi1b	54	41.718	ENSLBEG00000018509	-	93	41.718
ENSLBEG00000020297	gfi1b	53	35.366	ENSLBEG00000013197	PRDM15	51	35.366
ENSLBEG00000020297	gfi1b	53	40.000	ENSLBEG00000019067	zbtb47b	50	40.000
ENSLBEG00000020297	gfi1b	53	45.349	ENSLBEG00000011313	-	69	42.000
ENSLBEG00000020297	gfi1b	52	35.156	ENSLBEG00000014676	-	59	34.884
ENSLBEG00000020297	gfi1b	53	43.243	ENSLBEG00000002357	-	89	43.243
ENSLBEG00000020297	gfi1b	54	37.410	ENSLBEG00000017424	-	92	37.410
ENSLBEG00000020297	gfi1b	60	39.041	ENSLBEG00000011210	-	56	39.041
ENSLBEG00000020297	gfi1b	53	41.667	ENSLBEG00000006924	-	94	41.667
ENSLBEG00000020297	gfi1b	61	40.741	ENSLBEG00000010165	-	92	40.741
ENSLBEG00000020297	gfi1b	60	42.593	ENSLBEG00000025139	-	83	42.593
ENSLBEG00000020297	gfi1b	53	42.012	ENSLBEG00000004833	-	65	42.012
ENSLBEG00000020297	gfi1b	65	42.105	ENSLBEG00000015694	-	83	40.132
ENSLBEG00000020297	gfi1b	53	40.397	ENSLBEG00000021260	-	84	40.397
ENSLBEG00000020297	gfi1b	74	41.071	ENSLBEG00000011091	si:cabz01071911.3	94	41.071
ENSLBEG00000020297	gfi1b	57	40.828	ENSLBEG00000000343	-	68	40.828
ENSLBEG00000020297	gfi1b	63	38.194	ENSLBEG00000011751	znf526	54	38.194
ENSLBEG00000020297	gfi1b	94	43.802	ENSLBEG00000013570	-	99	45.029
ENSLBEG00000020297	gfi1b	58	32.787	ENSLBEG00000006963	-	71	32.787
ENSLBEG00000020297	gfi1b	56	40.845	ENSLBEG00000008439	znf319b	86	40.845
ENSLBEG00000020297	gfi1b	58	40.854	ENSLBEG00000022736	prdm5	68	40.854
ENSLBEG00000020297	gfi1b	59	40.123	ENSLBEG00000001920	-	86	42.857
ENSLBEG00000020297	gfi1b	53	41.304	ENSLBEG00000009567	-	56	41.085
ENSLBEG00000020297	gfi1b	53	41.139	ENSLBEG00000004867	-	67	41.139
ENSLBEG00000020297	gfi1b	53	44.444	ENSLBEG00000012947	-	84	44.444
ENSLBEG00000020297	gfi1b	53	43.125	ENSLBEG00000000393	-	68	43.125
ENSLBEG00000020297	gfi1b	63	38.194	ENSLBEG00000004892	-	79	38.194
ENSLBEG00000020297	gfi1b	58	38.172	ENSLBEG00000011028	-	72	42.361
ENSLBEG00000020297	gfi1b	71	40.120	ENSLBEG00000011465	-	88	40.120
ENSLBEG00000020297	gfi1b	53	43.333	ENSLBEG00000001715	-	88	43.333
ENSLBEG00000020297	gfi1b	85	39.437	ENSLBEG00000005715	-	76	39.437
ENSLBEG00000020297	gfi1b	55	40.741	ENSLBEG00000016562	znf646	61	40.741
ENSLBEG00000020297	gfi1b	71	40.816	ENSLBEG00000008115	-	92	40.816
ENSLBEG00000020297	gfi1b	56	44.186	ENSLBEG00000012438	ZNF319	95	44.186
ENSLBEG00000020297	gfi1b	54	40.881	ENSLBEG00000015264	-	81	40.881
ENSLBEG00000020297	gfi1b	80	42.361	ENSLBEG00000010278	-	95	44.048
ENSLBEG00000020297	gfi1b	53	48.507	ENSLBEG00000020128	-	95	48.507
ENSLBEG00000020297	gfi1b	54	35.185	ENSLBEG00000000972	snai2	95	34.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020297	gfi1b	99	80.665	ENSAPOG00000001296	gfi1b	100	80.363	Acanthochromis_polyacanthus
ENSLBEG00000020297	gfi1b	99	71.609	ENSACIG00000002190	gfi1b	99	71.609	Amphilophus_citrinellus
ENSLBEG00000020297	gfi1b	99	81.269	ENSAOCG00000021187	gfi1b	100	80.967	Amphiprion_ocellaris
ENSLBEG00000020297	gfi1b	99	81.381	ENSAPEG00000016196	gfi1b	100	81.081	Amphiprion_percula
ENSLBEG00000020297	gfi1b	99	83.483	ENSATEG00000002534	gfi1b	100	82.583	Anabas_testudineus
ENSLBEG00000020297	gfi1b	99	59.118	ENSAPLG00000003373	GFI1B	100	58.309	Anas_platyrhynchos
ENSLBEG00000020297	gfi1b	99	75.684	ENSACLG00000027053	gfi1b	99	75.380	Astatotilapia_calliptera
ENSLBEG00000020297	gfi1b	99	71.006	ENSAMXG00000037544	GFI1B	100	70.920	Astyanax_mexicanus
ENSLBEG00000020297	gfi1b	99	59.050	ENSCAPG00000010404	GFI1B	100	59.050	Cavia_aperea
ENSLBEG00000020297	gfi1b	99	59.654	ENSCPBG00000021186	GFI1B	100	58.721	Chrysemys_picta_bellii
ENSLBEG00000020297	gfi1b	99	77.477	ENSCSEG00000001315	gfi1b	100	77.844	Cynoglossus_semilaevis
ENSLBEG00000020297	gfi1b	99	79.430	ENSCVAG00000017168	gfi1b	100	79.430	Cyprinodon_variegatus
ENSLBEG00000020297	gfi1b	99	69.795	ENSDARG00000079947	gfi1b	99	85.654	Danio_rerio
ENSLBEG00000020297	gfi1b	68	51.613	ENSEEUG00000012609	-	96	51.613	Erinaceus_europaeus
ENSLBEG00000020297	gfi1b	99	74.631	ENSELUG00000016933	gfi1b	100	74.336	Esox_lucius
ENSLBEG00000020297	gfi1b	99	54.324	ENSFALG00000001479	GFI1B	100	54.301	Ficedula_albicollis
ENSLBEG00000020297	gfi1b	99	80.723	ENSFHEG00000015138	gfi1b	100	80.422	Fundulus_heteroclitus
ENSLBEG00000020297	gfi1b	99	70.032	ENSGMOG00000019123	gfi1b	89	86.975	Gadus_morhua
ENSLBEG00000020297	gfi1b	99	58.997	ENSGALG00000003478	GFI1B	100	58.997	Gallus_gallus
ENSLBEG00000020297	gfi1b	73	91.880	ENSGAFG00000003059	gfi1b	100	91.880	Gambusia_affinis
ENSLBEG00000020297	gfi1b	99	75.211	ENSGACG00000018134	gfi1b	100	75.211	Gasterosteus_aculeatus
ENSLBEG00000020297	gfi1b	99	60.831	ENSGAGG00000021327	GFI1B	100	60.831	Gopherus_agassizii
ENSLBEG00000020297	gfi1b	99	75.684	ENSHBUG00000005451	gfi1b	99	75.380	Haplochromis_burtoni
ENSLBEG00000020297	gfi1b	99	74.018	ENSHCOG00000013713	gfi1b	100	74.018	Hippocampus_comes
ENSLBEG00000020297	gfi1b	99	70.958	ENSIPUG00000012769	gfi1b	100	70.833	Ictalurus_punctatus
ENSLBEG00000020297	gfi1b	99	53.261	ENSJJAG00000016355	Gfi1b	100	53.261	Jaculus_jaculus
ENSLBEG00000020297	gfi1b	99	80.180	ENSKMAG00000016047	gfi1b	100	79.518	Kryptolebias_marmoratus
ENSLBEG00000020297	gfi1b	99	60.909	ENSLACG00000012207	GFI1B	100	60.909	Latimeria_chalumnae
ENSLBEG00000020297	gfi1b	99	66.954	ENSLOCG00000005750	gfi1b	100	66.954	Lepisosteus_oculatus
ENSLBEG00000020297	gfi1b	99	58.213	ENSLAFG00000022367	GFI1B	100	58.092	Loxodonta_africana
ENSLBEG00000020297	gfi1b	99	85.498	ENSMAMG00000003040	gfi1b	100	84.894	Mastacembelus_armatus
ENSLBEG00000020297	gfi1b	99	75.684	ENSMZEG00005015594	gfi1b	99	75.380	Maylandia_zebra
ENSLBEG00000020297	gfi1b	99	60.234	ENSMGAG00000006129	GFI1B	100	59.292	Meleagris_gallopavo
ENSLBEG00000020297	gfi1b	99	82.583	ENSMMOG00000011764	gfi1b	100	81.982	Mola_mola
ENSLBEG00000020297	gfi1b	99	53.846	ENSMODG00000012600	GFI1B	100	53.846	Monodelphis_domestica
ENSLBEG00000020297	gfi1b	99	84.036	ENSMALG00000004034	gfi1b	100	83.735	Monopterus_albus
ENSLBEG00000020297	gfi1b	99	58.507	ENSNGAG00000003333	Gfi1b	100	58.507	Nannospalax_galili
ENSLBEG00000020297	gfi1b	99	75.831	ENSNBRG00000012391	gfi1b	99	75.227	Neolamprologus_brichardi
ENSLBEG00000020297	gfi1b	99	76.133	ENSONIG00000013011	gfi1b	100	75.652	Oreochromis_niloticus
ENSLBEG00000020297	gfi1b	99	59.459	ENSOANG00000014723	GFI1B	100	59.118	Ornithorhynchus_anatinus
ENSLBEG00000020297	gfi1b	99	58.125	ENSORLG00000014390	GFI1B	96	68.440	Oryzias_latipes
ENSLBEG00000020297	gfi1b	99	74.850	ENSORLG00020003719	GFI1B	100	74.551	Oryzias_latipes_hni
ENSLBEG00000020297	gfi1b	99	74.551	ENSORLG00015017142	gfi1b	100	74.251	Oryzias_latipes_hsok
ENSLBEG00000020297	gfi1b	99	74.622	ENSOMEG00000015149	GFI1B	100	74.775	Oryzias_melastigma
ENSLBEG00000020297	gfi1b	99	58.065	ENSOGAG00000008879	GFI1B	100	57.567	Otolemur_garnettii
ENSLBEG00000020297	gfi1b	99	69.617	ENSPKIG00000007643	gfi1b	100	70.326	Paramormyrops_kingsleyae
ENSLBEG00000020297	gfi1b	99	60.511	ENSPSIG00000012112	GFI1B	100	60.114	Pelodiscus_sinensis
ENSLBEG00000020297	gfi1b	98	70.405	ENSPMGG00000006021	gfi1b	99	71.651	Periophthalmus_magnuspinnatus
ENSLBEG00000020297	gfi1b	99	51.913	ENSPCIG00000019724	GFI1B	100	50.938	Phascolarctos_cinereus
ENSLBEG00000020297	gfi1b	99	80.712	ENSPFOG00000003460	gfi1b	100	80.712	Poecilia_formosa
ENSLBEG00000020297	gfi1b	99	82.175	ENSPLAG00000021960	GFI1B	100	82.175	Poecilia_latipinna
ENSLBEG00000020297	gfi1b	99	80.059	ENSPLAG00000017181	GFI1B	100	80.059	Poecilia_latipinna
ENSLBEG00000020297	gfi1b	99	81.873	ENSPMEG00000001556	GFI1B	100	81.873	Poecilia_mexicana
ENSLBEG00000020297	gfi1b	99	81.873	ENSPMEG00000019220	gfi1b	100	81.873	Poecilia_mexicana
ENSLBEG00000020297	gfi1b	99	81.571	ENSPREG00000021718	gfi1b	100	81.571	Poecilia_reticulata
ENSLBEG00000020297	gfi1b	99	76.061	ENSPNYG00000018422	gfi1b	99	75.455	Pundamilia_nyererei
ENSLBEG00000020297	gfi1b	99	71.257	ENSPNAG00000021118	gfi1b	100	71.257	Pygocentrus_nattereri
ENSLBEG00000020297	gfi1b	99	49.591	ENSSHAG00000006462	GFI1B	100	49.591	Sarcophilus_harrisii
ENSLBEG00000020297	gfi1b	82	63.475	ENSSFOG00015011566	gfi1b	90	63.475	Scleropages_formosus
ENSLBEG00000020297	gfi1b	100	80.299	ENSSMAG00000015181	gfi1b	99	79.403	Scophthalmus_maximus
ENSLBEG00000020297	gfi1b	99	84.894	ENSSDUG00000011604	gfi1b	100	84.290	Seriola_dumerili
ENSLBEG00000020297	gfi1b	99	83.686	ENSSLDG00000013823	gfi1b	100	83.082	Seriola_lalandi_dorsalis
ENSLBEG00000020297	gfi1b	99	51.020	ENSSPUG00000016039	GFI1B	100	50.729	Sphenodon_punctatus
ENSLBEG00000020297	gfi1b	99	80.422	ENSSPAG00000022914	gfi1b	100	80.120	Stegastes_partitus
ENSLBEG00000020297	gfi1b	67	48.235	ENSTGUG00000015953	-	74	52.817	Taeniopygia_guttata
ENSLBEG00000020297	gfi1b	52	92.105	ENSTGUG00000005282	-	99	92.105	Taeniopygia_guttata
ENSLBEG00000020297	gfi1b	99	78.248	ENSTRUG00000004525	gfi1b	100	77.946	Takifugu_rubripes
ENSLBEG00000020297	gfi1b	99	76.807	ENSTNIG00000003834	gfi1b	100	76.807	Tetraodon_nigroviridis
ENSLBEG00000020297	gfi1b	99	43.787	ENSTBEG00000014459	GFI1B	100	43.323	Tupaia_belangeri
ENSLBEG00000020297	gfi1b	99	57.270	ENSXETG00000006263	gfi1b	100	58.160	Xenopus_tropicalis
ENSLBEG00000020297	gfi1b	99	82.175	ENSXMAG00000027589	gfi1b	100	82.175	Xiphophorus_maculatus