EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000020372 (Gene tree)
Gene ID: 109999591
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5489 bases
Position: chrFKLU01000576.1:89817-95305
Accession: 109999591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000026792	efThoc1	PF11957.8	6.2e-144	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028090	-	2019	XM_020654672	ENSLBEP00000026792	667 (aa)	XP_020510328	-

Gene Model

Click here to download ENSLBEG00000020372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020372	thoc1	98	72.824	ENSG00000079134	THOC1	99	77.895	Homo_sapiens
ENSLBEG00000020372	thoc1	98	73.171	ENSAMEG00000006645	THOC1	99	73.171	Ailuropoda_melanoleuca
ENSLBEG00000020372	thoc1	96	86.520	ENSACIG00000019392	thoc1	95	90.228	Amphilophus_citrinellus
ENSLBEG00000020372	thoc1	98	87.920	ENSAOCG00000008391	thoc1	100	87.920	Amphiprion_ocellaris
ENSLBEG00000020372	thoc1	98	93.425	ENSAPEG00000001093	thoc1	100	93.425	Amphiprion_percula
ENSLBEG00000020372	thoc1	98	92.661	ENSATEG00000004783	thoc1	100	92.661	Anabas_testudineus
ENSLBEG00000020372	thoc1	98	71.951	ENSAPLG00000016149	THOC1	98	71.951	Anas_platyrhynchos
ENSLBEG00000020372	thoc1	98	71.970	ENSACAG00000008307	THOC1	97	71.364	Anolis_carolinensis
ENSLBEG00000020372	thoc1	98	72.205	ENSANAG00000033200	THOC1	99	72.205	Aotus_nancymaae
ENSLBEG00000020372	thoc1	98	91.590	ENSACLG00000016836	thoc1	100	91.590	Astatotilapia_calliptera
ENSLBEG00000020372	thoc1	94	75.549	ENSAMXG00000014708	thoc1	98	74.882	Astyanax_mexicanus
ENSLBEG00000020372	thoc1	98	73.435	ENSBTAG00000019215	THOC1	99	73.435	Bos_taurus
ENSLBEG00000020372	thoc1	67	35.345	WBGene00020172	thoc-1	69	35.532	Caenorhabditis_elegans
ENSLBEG00000020372	thoc1	98	72.977	ENSCJAG00000020450	THOC1	99	72.977	Callithrix_jacchus
ENSLBEG00000020372	thoc1	98	73.282	ENSCAFG00000018324	THOC1	99	73.282	Canis_familiaris
ENSLBEG00000020372	thoc1	98	73.282	ENSCAFG00020017894	THOC1	99	73.282	Canis_lupus_dingo
ENSLBEG00000020372	thoc1	98	73.435	ENSCHIG00000015399	THOC1	99	73.435	Capra_hircus
ENSLBEG00000020372	thoc1	98	72.866	ENSTSYG00000010585	THOC1	99	72.866	Carlito_syrichta
ENSLBEG00000020372	thoc1	95	52.566	ENSCAPG00000016270	THOC1	97	52.566	Cavia_aperea
ENSLBEG00000020372	thoc1	98	71.933	ENSCPOG00000000959	THOC1	98	71.933	Cavia_porcellus
ENSLBEG00000020372	thoc1	98	72.977	ENSCCAG00000025766	THOC1	99	72.977	Cebus_capucinus
ENSLBEG00000020372	thoc1	98	71.145	ENSCATG00000028180	THOC1	96	78.035	Cercocebus_atys
ENSLBEG00000020372	thoc1	95	73.428	ENSCLAG00000009117	THOC1	99	73.428	Chinchilla_lanigera
ENSLBEG00000020372	thoc1	98	72.977	ENSCSAG00000017631	THOC1	99	72.977	Chlorocebus_sabaeus
ENSLBEG00000020372	thoc1	77	79.253	ENSCHOG00000010609	THOC1	78	79.253	Choloepus_hoffmanni
ENSLBEG00000020372	thoc1	98	73.507	ENSCPBG00000027558	THOC1	99	73.507	Chrysemys_picta_bellii
ENSLBEG00000020372	thoc1	72	47.475	ENSCING00000007663	-	99	47.475	Ciona_intestinalis
ENSLBEG00000020372	thoc1	92	47.402	ENSCSAVG00000010649	-	100	47.402	Ciona_savignyi
ENSLBEG00000020372	thoc1	98	72.824	ENSCANG00000034265	THOC1	96	78.363	Colobus_angolensis_palliatus
ENSLBEG00000020372	thoc1	98	72.561	ENSCGRG00001016464	Thoc1	99	72.561	Cricetulus_griseus_chok1gshd
ENSLBEG00000020372	thoc1	97	72.446	ENSCGRG00000010269	-	99	73.270	Cricetulus_griseus_crigri
ENSLBEG00000020372	thoc1	88	59.864	ENSCGRG00000003390	-	97	59.864	Cricetulus_griseus_crigri
ENSLBEG00000020372	thoc1	98	87.234	ENSCSEG00000012486	thoc1	99	88.264	Cynoglossus_semilaevis
ENSLBEG00000020372	thoc1	98	90.520	ENSCVAG00000020600	thoc1	100	90.520	Cyprinodon_variegatus
ENSLBEG00000020372	thoc1	98	82.362	ENSDARG00000088246	thoc1	99	82.362	Danio_rerio
ENSLBEG00000020372	thoc1	98	72.936	ENSDNOG00000019217	THOC1	99	72.936	Dasypus_novemcinctus
ENSLBEG00000020372	thoc1	96	69.579	ENSDORG00000008060	Thoc1	99	69.579	Dipodomys_ordii
ENSLBEG00000020372	thoc1	79	41.367	FBgn0037382	Hpr1	74	41.367	Drosophila_melanogaster
ENSLBEG00000020372	thoc1	88	57.095	ENSETEG00000004165	THOC1	99	57.095	Echinops_telfairi
ENSLBEG00000020372	thoc1	90	62.748	ENSEBUG00000005998	thoc1	98	63.682	Eptatretus_burgeri
ENSLBEG00000020372	thoc1	98	72.866	ENSEASG00005002549	THOC1	95	72.866	Equus_asinus_asinus
ENSLBEG00000020372	thoc1	98	73.323	ENSECAG00000009267	THOC1	89	73.323	Equus_caballus
ENSLBEG00000020372	thoc1	78	57.447	ENSEEUG00000012214	-	81	57.447	Erinaceus_europaeus
ENSLBEG00000020372	thoc1	98	86.301	ENSELUG00000023277	thoc1	100	86.301	Esox_lucius
ENSLBEG00000020372	thoc1	98	73.628	ENSFCAG00000022454	THOC1	86	73.628	Felis_catus
ENSLBEG00000020372	thoc1	95	73.167	ENSFALG00000006205	THOC1	99	73.167	Ficedula_albicollis
ENSLBEG00000020372	thoc1	96	72.981	ENSFDAG00000006842	THOC1	99	72.981	Fukomys_damarensis
ENSLBEG00000020372	thoc1	98	90.520	ENSFHEG00000008841	thoc1	100	90.520	Fundulus_heteroclitus
ENSLBEG00000020372	thoc1	98	87.730	ENSGMOG00000011486	thoc1	99	87.730	Gadus_morhua
ENSLBEG00000020372	thoc1	98	73.047	ENSGALG00000014915	THOC1	99	72.163	Gallus_gallus
ENSLBEG00000020372	thoc1	98	90.214	ENSGAFG00000021464	thoc1	100	90.214	Gambusia_affinis
ENSLBEG00000020372	thoc1	98	91.896	ENSGACG00000017361	thoc1	100	91.896	Gasterosteus_aculeatus
ENSLBEG00000020372	thoc1	98	74.119	ENSGAGG00000021230	-	97	74.119	Gopherus_agassizii
ENSLBEG00000020372	thoc1	98	73.018	ENSGGOG00000003013	THOC1	99	73.018	Gorilla_gorilla
ENSLBEG00000020372	thoc1	98	91.896	ENSHBUG00000009096	thoc1	100	91.896	Haplochromis_burtoni
ENSLBEG00000020372	thoc1	98	73.313	ENSHGLG00000003712	-	98	73.313	Heterocephalus_glaber_female
ENSLBEG00000020372	thoc1	69	68.421	ENSHGLG00000009264	-	98	68.421	Heterocephalus_glaber_female
ENSLBEG00000020372	thoc1	98	73.160	ENSHGLG00100003570	THOC1	98	73.160	Heterocephalus_glaber_male
ENSLBEG00000020372	thoc1	67	67.914	ENSHGLG00100002225	-	98	67.914	Heterocephalus_glaber_male
ENSLBEG00000020372	thoc1	97	69.814	ENSIPUG00000005306	thoc1	100	69.505	Ictalurus_punctatus
ENSLBEG00000020372	thoc1	98	72.824	ENSSTOG00000006484	THOC1	99	72.824	Ictidomys_tridecemlineatus
ENSLBEG00000020372	thoc1	51	74.709	ENSJJAG00000014893	-	96	74.709	Jaculus_jaculus
ENSLBEG00000020372	thoc1	98	91.896	ENSKMAG00000003904	thoc1	100	91.896	Kryptolebias_marmoratus
ENSLBEG00000020372	thoc1	98	73.354	ENSLACG00000014869	THOC1	99	73.047	Latimeria_chalumnae
ENSLBEG00000020372	thoc1	98	82.523	ENSLOCG00000002097	thoc1	99	82.219	Lepisosteus_oculatus
ENSLBEG00000020372	thoc1	98	73.130	ENSLAFG00000009585	THOC1	99	73.130	Loxodonta_africana
ENSLBEG00000020372	thoc1	98	73.018	ENSMFAG00000041520	THOC1	99	73.018	Macaca_fascicularis
ENSLBEG00000020372	thoc1	98	72.977	ENSMMUG00000004662	THOC1	99	72.977	Macaca_mulatta
ENSLBEG00000020372	thoc1	98	73.018	ENSMNEG00000040177	THOC1	99	73.018	Macaca_nemestrina
ENSLBEG00000020372	thoc1	98	73.018	ENSMLEG00000034201	THOC1	99	73.018	Mandrillus_leucophaeus
ENSLBEG00000020372	thoc1	94	89.793	ENSMAMG00000016747	thoc1	100	89.793	Mastacembelus_armatus
ENSLBEG00000020372	thoc1	98	91.590	ENSMZEG00005024609	thoc1	100	91.590	Maylandia_zebra
ENSLBEG00000020372	thoc1	95	73.239	ENSMGAG00000009811	THOC1	99	73.239	Meleagris_gallopavo
ENSLBEG00000020372	thoc1	98	72.409	ENSMAUG00000010272	Thoc1	99	72.409	Mesocricetus_auratus
ENSLBEG00000020372	thoc1	98	73.282	ENSMICG00000027200	THOC1	99	73.282	Microcebus_murinus
ENSLBEG00000020372	thoc1	98	71.603	ENSMOCG00000014536	-	86	71.603	Microtus_ochrogaster
ENSLBEG00000020372	thoc1	98	63.190	ENSMOCG00000014924	-	95	63.190	Microtus_ochrogaster
ENSLBEG00000020372	thoc1	92	92.320	ENSMMOG00000011772	thoc1	100	92.320	Mola_mola
ENSLBEG00000020372	thoc1	98	71.884	ENSMODG00000021482	THOC1	98	71.733	Monodelphis_domestica
ENSLBEG00000020372	thoc1	98	91.131	ENSMALG00000021872	thoc1	100	91.131	Monopterus_albus
ENSLBEG00000020372	thoc1	98	72.061	MGP_CAROLIEiJ_G0021989	Thoc1	99	72.061	Mus_caroli
ENSLBEG00000020372	thoc1	98	72.214	ENSMUSG00000024287	Thoc1	98	83.099	Mus_musculus
ENSLBEG00000020372	thoc1	98	72.214	MGP_PahariEiJ_G0018726	Thoc1	99	72.214	Mus_pahari
ENSLBEG00000020372	thoc1	98	72.214	MGP_SPRETEiJ_G0022905	Thoc1	99	72.214	Mus_spretus
ENSLBEG00000020372	thoc1	98	73.130	ENSMPUG00000005448	THOC1	99	73.130	Mustela_putorius_furo
ENSLBEG00000020372	thoc1	60	66.667	ENSMLUG00000024912	-	100	66.667	Myotis_lucifugus
ENSLBEG00000020372	thoc1	89	67.337	ENSMLUG00000027965	-	99	67.504	Myotis_lucifugus
ENSLBEG00000020372	thoc1	98	72.366	ENSMLUG00000004090	-	99	72.366	Myotis_lucifugus
ENSLBEG00000020372	thoc1	98	72.672	ENSNGAG00000001401	-	99	72.672	Nannospalax_galili
ENSLBEG00000020372	thoc1	95	57.928	ENSNGAG00000008061	-	97	57.928	Nannospalax_galili
ENSLBEG00000020372	thoc1	96	90.125	ENSNBRG00000005991	thoc1	97	90.125	Neolamprologus_brichardi
ENSLBEG00000020372	thoc1	98	72.977	ENSNLEG00000006835	THOC1	99	72.977	Nomascus_leucogenys
ENSLBEG00000020372	thoc1	87	77.088	ENSMEUG00000009756	THOC1	82	77.088	Notamacropus_eugenii
ENSLBEG00000020372	thoc1	98	58.779	ENSOPRG00000001108	THOC1	99	58.779	Ochotona_princeps
ENSLBEG00000020372	thoc1	98	67.331	ENSODEG00000006623	THOC1	98	67.331	Octodon_degus
ENSLBEG00000020372	thoc1	99	91.128	ENSONIG00000009440	thoc1	98	92.012	Oreochromis_niloticus
ENSLBEG00000020372	thoc1	98	73.130	ENSOCUG00000011601	THOC1	99	73.130	Oryctolagus_cuniculus
ENSLBEG00000020372	thoc1	98	91.437	ENSORLG00000017629	thoc1	100	91.437	Oryzias_latipes
ENSLBEG00000020372	thoc1	98	91.284	ENSORLG00020007567	thoc1	100	91.284	Oryzias_latipes_hni
ENSLBEG00000020372	thoc1	98	91.437	ENSORLG00015007356	thoc1	100	91.437	Oryzias_latipes_hsok
ENSLBEG00000020372	thoc1	98	90.214	ENSOMEG00000008200	thoc1	100	90.979	Oryzias_melastigma
ENSLBEG00000020372	thoc1	98	70.122	ENSOGAG00000000470	THOC1	99	70.122	Otolemur_garnettii
ENSLBEG00000020372	thoc1	96	73.717	ENSOARG00000009238	THOC1	97	73.717	Ovis_aries
ENSLBEG00000020372	thoc1	98	73.018	ENSPPAG00000031812	THOC1	99	73.018	Pan_paniscus
ENSLBEG00000020372	thoc1	98	72.977	ENSPPRG00000023794	THOC1	96	78.902	Panthera_pardus
ENSLBEG00000020372	thoc1	98	72.977	ENSPTIG00000007469	THOC1	96	78.902	Panthera_tigris_altaica
ENSLBEG00000020372	thoc1	98	72.054	ENSPTRG00000009816	THOC1	99	72.054	Pan_troglodytes
ENSLBEG00000020372	thoc1	98	72.079	ENSPANG00000008665	THOC1	99	72.079	Papio_anubis
ENSLBEG00000020372	thoc1	98	82.901	ENSPKIG00000005906	thoc1	100	84.427	Paramormyrops_kingsleyae
ENSLBEG00000020372	thoc1	79	75.758	ENSPSIG00000007691	THOC1	97	75.758	Pelodiscus_sinensis
ENSLBEG00000020372	thoc1	92	85.900	ENSPMGG00000008279	thoc1	95	85.900	Periophthalmus_magnuspinnatus
ENSLBEG00000020372	thoc1	98	72.366	ENSPEMG00000021789	Thoc1	99	72.366	Peromyscus_maniculatus_bairdii
ENSLBEG00000020372	thoc1	72	72.041	ENSPCIG00000026942	THOC1	97	72.041	Phascolarctos_cinereus
ENSLBEG00000020372	thoc1	98	89.908	ENSPFOG00000011673	thoc1	100	89.908	Poecilia_formosa
ENSLBEG00000020372	thoc1	98	90.061	ENSPLAG00000019648	thoc1	100	90.061	Poecilia_latipinna
ENSLBEG00000020372	thoc1	98	90.061	ENSPMEG00000007083	thoc1	100	90.061	Poecilia_mexicana
ENSLBEG00000020372	thoc1	98	90.367	ENSPREG00000006719	thoc1	100	90.367	Poecilia_reticulata
ENSLBEG00000020372	thoc1	73	76.892	ENSPPYG00000009049	-	99	76.892	Pongo_abelii
ENSLBEG00000020372	thoc1	98	65.191	ENSPCAG00000005320	THOC1	99	64.885	Procavia_capensis
ENSLBEG00000020372	thoc1	98	72.519	ENSPCOG00000009234	THOC1	99	72.519	Propithecus_coquereli
ENSLBEG00000020372	thoc1	98	71.603	ENSPVAG00000004007	THOC1	99	71.603	Pteropus_vampyrus
ENSLBEG00000020372	thoc1	98	91.896	ENSPNYG00000019152	thoc1	100	91.896	Pundamilia_nyererei
ENSLBEG00000020372	thoc1	98	82.695	ENSPNAG00000023390	thoc1	99	82.389	Pygocentrus_nattereri
ENSLBEG00000020372	thoc1	88	52.034	ENSRNOG00000015332	Thoc1	94	52.034	Rattus_norvegicus
ENSLBEG00000020372	thoc1	98	72.205	ENSRBIG00000033738	THOC1	99	75.000	Rhinopithecus_bieti
ENSLBEG00000020372	thoc1	98	72.977	ENSRROG00000044988	THOC1	96	78.363	Rhinopithecus_roxellana
ENSLBEG00000020372	thoc1	98	72.713	ENSSBOG00000016556	THOC1	99	72.713	Saimiri_boliviensis_boliviensis
ENSLBEG00000020372	thoc1	98	72.699	ENSSHAG00000014829	THOC1	98	72.699	Sarcophilus_harrisii
ENSLBEG00000020372	thoc1	98	86.086	ENSSFOG00015021527	thoc1	100	86.086	Scleropages_formosus
ENSLBEG00000020372	thoc1	98	88.754	ENSSMAG00000018465	thoc1	100	88.754	Scophthalmus_maximus
ENSLBEG00000020372	thoc1	98	93.119	ENSSDUG00000016810	thoc1	100	93.119	Seriola_dumerili
ENSLBEG00000020372	thoc1	98	92.813	ENSSLDG00000015555	thoc1	100	92.813	Seriola_lalandi_dorsalis
ENSLBEG00000020372	thoc1	86	74.809	ENSSARG00000006910	THOC1	87	74.809	Sorex_araneus
ENSLBEG00000020372	thoc1	96	72.628	ENSSPUG00000007238	THOC1	98	72.308	Sphenodon_punctatus
ENSLBEG00000020372	thoc1	98	87.519	ENSSPAG00000018847	thoc1	100	87.519	Stegastes_partitus
ENSLBEG00000020372	thoc1	98	73.323	ENSSSCG00000025653	THOC1	93	73.323	Sus_scrofa
ENSLBEG00000020372	thoc1	98	73.507	ENSTGUG00000010204	THOC1	99	73.507	Taeniopygia_guttata
ENSLBEG00000020372	thoc1	98	90.979	ENSTRUG00000013518	thoc1	100	90.979	Takifugu_rubripes
ENSLBEG00000020372	thoc1	98	89.939	ENSTNIG00000008473	thoc1	100	89.939	Tetraodon_nigroviridis
ENSLBEG00000020372	thoc1	98	65.802	ENSTBEG00000016920	THOC1	99	65.802	Tupaia_belangeri
ENSLBEG00000020372	thoc1	98	66.870	ENSTTRG00000016664	THOC1	99	66.870	Tursiops_truncatus
ENSLBEG00000020372	thoc1	98	73.282	ENSUAMG00000002527	THOC1	99	73.282	Ursus_americanus
ENSLBEG00000020372	thoc1	98	73.282	ENSUMAG00000019693	THOC1	99	73.282	Ursus_maritimus
ENSLBEG00000020372	thoc1	65	69.295	ENSVPAG00000003726	-	66	69.295	Vicugna_pacos
ENSLBEG00000020372	thoc1	98	73.282	ENSVVUG00000004384	THOC1	99	73.282	Vulpes_vulpes
ENSLBEG00000020372	thoc1	98	69.637	ENSXETG00000003155	thoc1	97	69.637	Xenopus_tropicalis
ENSLBEG00000020372	thoc1	94	84.102	ENSXCOG00000016085	thoc1	91	84.102	Xiphophorus_couchianus
ENSLBEG00000020372	thoc1	98	90.520	ENSXMAG00000002353	thoc1	100	90.520	Xiphophorus_maculatus