EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000020394 (Gene tree)
Gene ID: 109990287
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5966 bases
Position: chrFKLU01000180.1:487663-493628
Accession: 109990287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027015	PseudoU_synth_2	PF00849.22	1e-24	1	1
ENSLBEP00000027002	PseudoU_synth_2	PF00849.22	1.2e-23	1	1
ENSLBEP00000026958	PseudoU_synth_2	PF00849.22	1.2e-23	1	1
ENSLBEP00000026987	PseudoU_synth_2	PF00849.22	5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028257	-	1071	-	ENSLBEP00000026958	356 (aa)	-	-
ENSLBET00000028315	-	1209	XM_020642355	ENSLBEP00000027015	402 (aa)	XP_020498011	-
ENSLBET00000028301	-	1074	-	ENSLBEP00000027002	357 (aa)	-	-
ENSLBET00000028286	-	1155	-	ENSLBEP00000026987	384 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000020394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020394	rpusd4	90	50.621	ENSG00000165526	RPUSD4	92	47.765	Homo_sapiens
ENSLBEG00000020394	rpusd4	98	78.632	ENSAPOG00000011024	rpusd4	95	72.569	Acanthochromis_polyacanthus
ENSLBEG00000020394	rpusd4	65	55.670	ENSAMEG00000005953	-	93	55.670	Ailuropoda_melanoleuca
ENSLBEG00000020394	rpusd4	91	52.147	ENSAMEG00000000127	-	85	52.147	Ailuropoda_melanoleuca
ENSLBEG00000020394	rpusd4	92	76.994	ENSACIG00000003533	rpusd4	95	76.994	Amphilophus_citrinellus
ENSLBEG00000020394	rpusd4	93	81.818	ENSAOCG00000015409	rpusd4	93	72.774	Amphiprion_ocellaris
ENSLBEG00000020394	rpusd4	93	82.121	ENSAPEG00000018935	rpusd4	93	73.028	Amphiprion_percula
ENSLBEG00000020394	rpusd4	94	78.144	ENSATEG00000008059	rpusd4	97	68.689	Anabas_testudineus
ENSLBEG00000020394	rpusd4	78	50.000	ENSAPLG00000013250	RPUSD4	99	49.324	Anas_platyrhynchos
ENSLBEG00000020394	rpusd4	98	48.295	ENSACAG00000000189	RPUSD4	93	48.295	Anolis_carolinensis
ENSLBEG00000020394	rpusd4	91	49.085	ENSANAG00000024050	RPUSD4	87	49.085	Aotus_nancymaae
ENSLBEG00000020394	rpusd4	93	78.012	ENSACLG00000020996	rpusd4	93	70.312	Astatotilapia_calliptera
ENSLBEG00000020394	rpusd4	97	59.490	ENSAMXG00000031479	rpusd4	99	59.490	Astyanax_mexicanus
ENSLBEG00000020394	rpusd4	90	53.106	ENSBTAG00000020900	RPUSD4	82	53.106	Bos_taurus
ENSLBEG00000020394	rpusd4	91	49.085	ENSCJAG00000042850	RPUSD4	81	49.085	Callithrix_jacchus
ENSLBEG00000020394	rpusd4	91	52.744	ENSCAFG00000010488	RPUSD4	85	52.744	Canis_familiaris
ENSLBEG00000020394	rpusd4	91	52.744	ENSCAFG00020010621	RPUSD4	85	52.744	Canis_lupus_dingo
ENSLBEG00000020394	rpusd4	90	52.484	ENSCHIG00000009975	RPUSD4	82	52.484	Capra_hircus
ENSLBEG00000020394	rpusd4	99	49.859	ENSTSYG00000008456	RPUSD4	92	48.588	Carlito_syrichta
ENSLBEG00000020394	rpusd4	68	51.230	ENSCAPG00000006040	RPUSD4	93	51.020	Cavia_aperea
ENSLBEG00000020394	rpusd4	92	53.333	ENSCPOG00000014971	RPUSD4	86	53.333	Cavia_porcellus
ENSLBEG00000020394	rpusd4	91	49.085	ENSCCAG00000027838	RPUSD4	87	49.085	Cebus_capucinus
ENSLBEG00000020394	rpusd4	99	47.887	ENSCATG00000041570	RPUSD4	89	47.887	Cercocebus_atys
ENSLBEG00000020394	rpusd4	98	50.425	ENSCLAG00000016553	RPUSD4	92	50.425	Chinchilla_lanigera
ENSLBEG00000020394	rpusd4	99	48.169	ENSCSAG00000002274	RPUSD4	88	49.267	Chlorocebus_sabaeus
ENSLBEG00000020394	rpusd4	76	51.825	ENSCHOG00000010249	RPUSD4	95	51.825	Choloepus_hoffmanni
ENSLBEG00000020394	rpusd4	80	53.287	ENSCPBG00000011175	RPUSD4	99	53.287	Chrysemys_picta_bellii
ENSLBEG00000020394	rpusd4	76	40.502	ENSCSAVG00000000872	-	54	40.925	Ciona_savignyi
ENSLBEG00000020394	rpusd4	99	47.887	ENSCANG00000039684	RPUSD4	89	47.887	Colobus_angolensis_palliatus
ENSLBEG00000020394	rpusd4	96	48.000	ENSCGRG00001024141	Rpusd4	94	48.000	Cricetulus_griseus_chok1gshd
ENSLBEG00000020394	rpusd4	96	48.000	ENSCGRG00000014415	Rpusd4	94	48.000	Cricetulus_griseus_crigri
ENSLBEG00000020394	rpusd4	56	64.141	ENSCSEG00000006462	-	87	64.141	Cynoglossus_semilaevis
ENSLBEG00000020394	rpusd4	94	72.836	ENSCVAG00000008761	rpusd4	99	63.524	Cyprinodon_variegatus
ENSLBEG00000020394	rpusd4	94	72.239	ENSCVAG00000000392	rpusd4	95	72.372	Cyprinodon_variegatus
ENSLBEG00000020394	rpusd4	98	57.790	ENSDARG00000012674	rpusd4	98	57.790	Danio_rerio
ENSLBEG00000020394	rpusd4	91	51.524	ENSDNOG00000020026	RPUSD4	86	51.524	Dasypus_novemcinctus
ENSLBEG00000020394	rpusd4	98	48.159	ENSDORG00000016717	Rpusd4	92	48.159	Dipodomys_ordii
ENSLBEG00000020394	rpusd4	91	50.915	ENSETEG00000013953	RPUSD4	86	50.915	Echinops_telfairi
ENSLBEG00000020394	rpusd4	91	51.829	ENSEASG00005022982	RPUSD4	86	51.829	Equus_asinus_asinus
ENSLBEG00000020394	rpusd4	99	48.876	ENSECAG00000000557	RPUSD4	93	48.876	Equus_caballus
ENSLBEG00000020394	rpusd4	72	55.866	ENSEEUG00000014036	RPUSD4	67	56.180	Erinaceus_europaeus
ENSLBEG00000020394	rpusd4	93	64.223	ENSELUG00000008075	rpusd4	97	59.115	Esox_lucius
ENSLBEG00000020394	rpusd4	91	50.305	ENSFCAG00000029789	RPUSD4	86	50.305	Felis_catus
ENSLBEG00000020394	rpusd4	91	47.840	ENSFALG00000005171	RPUSD4	95	47.840	Ficedula_albicollis
ENSLBEG00000020394	rpusd4	92	52.121	ENSFDAG00000014307	RPUSD4	87	52.121	Fukomys_damarensis
ENSLBEG00000020394	rpusd4	93	75.152	ENSFHEG00000004329	rpusd4	99	67.246	Fundulus_heteroclitus
ENSLBEG00000020394	rpusd4	92	62.997	ENSGMOG00000017726	rpusd4	97	63.110	Gadus_morhua
ENSLBEG00000020394	rpusd4	78	53.901	ENSGALG00000024326	RPUSD4	94	48.824	Gallus_gallus
ENSLBEG00000020394	rpusd4	94	74.260	ENSGAFG00000021559	rpusd4	96	67.347	Gambusia_affinis
ENSLBEG00000020394	rpusd4	92	77.914	ENSGACG00000001657	rpusd4	98	78.419	Gasterosteus_aculeatus
ENSLBEG00000020394	rpusd4	96	50.432	ENSGAGG00000000132	RPUSD4	95	50.432	Gopherus_agassizii
ENSLBEG00000020394	rpusd4	90	50.932	ENSGGOG00000016494	RPUSD4	93	46.479	Gorilla_gorilla
ENSLBEG00000020394	rpusd4	99	74.095	ENSHBUG00000022838	rpusd4	92	74.095	Haplochromis_burtoni
ENSLBEG00000020394	rpusd4	92	50.909	ENSHGLG00000002285	RPUSD4	86	50.909	Heterocephalus_glaber_female
ENSLBEG00000020394	rpusd4	92	50.909	ENSHGLG00100006385	RPUSD4	86	50.909	Heterocephalus_glaber_male
ENSLBEG00000020394	rpusd4	93	73.494	ENSHCOG00000006612	rpusd4	85	73.494	Hippocampus_comes
ENSLBEG00000020394	rpusd4	92	60.241	ENSIPUG00000023879	rusd4	85	60.241	Ictalurus_punctatus
ENSLBEG00000020394	rpusd4	90	53.727	ENSSTOG00000025280	RPUSD4	86	53.727	Ictidomys_tridecemlineatus
ENSLBEG00000020394	rpusd4	91	52.905	ENSJJAG00000018673	Rpusd4	87	52.905	Jaculus_jaculus
ENSLBEG00000020394	rpusd4	93	75.075	ENSKMAG00000021805	rpusd4	97	68.901	Kryptolebias_marmoratus
ENSLBEG00000020394	rpusd4	91	53.333	ENSLACG00000011028	RPUSD4	87	51.289	Latimeria_chalumnae
ENSLBEG00000020394	rpusd4	92	45.758	ENSLOCG00000003124	rpusd4	93	44.568	Lepisosteus_oculatus
ENSLBEG00000020394	rpusd4	93	50.442	ENSLAFG00000005211	RPUSD4	100	43.729	Loxodonta_africana
ENSLBEG00000020394	rpusd4	99	47.887	ENSMFAG00000039513	RPUSD4	89	47.887	Macaca_fascicularis
ENSLBEG00000020394	rpusd4	99	47.606	ENSMMUG00000007933	RPUSD4	89	47.606	Macaca_mulatta
ENSLBEG00000020394	rpusd4	99	47.887	ENSMNEG00000027414	RPUSD4	89	47.887	Macaca_nemestrina
ENSLBEG00000020394	rpusd4	95	48.974	ENSMLEG00000042461	RPUSD4	88	48.974	Mandrillus_leucophaeus
ENSLBEG00000020394	rpusd4	93	80.299	ENSMAMG00000023839	rpusd4	94	74.016	Mastacembelus_armatus
ENSLBEG00000020394	rpusd4	93	78.012	ENSMZEG00005011999	rpusd4	93	70.312	Maylandia_zebra
ENSLBEG00000020394	rpusd4	78	53.214	ENSMGAG00000000840	RPUSD4	98	49.695	Meleagris_gallopavo
ENSLBEG00000020394	rpusd4	91	52.134	ENSMAUG00000010280	Rpusd4	86	52.134	Mesocricetus_auratus
ENSLBEG00000020394	rpusd4	94	52.226	ENSMICG00000015979	RPUSD4	89	54.485	Microcebus_murinus
ENSLBEG00000020394	rpusd4	96	46.400	ENSMOCG00000000661	Rpusd4	94	46.400	Microtus_ochrogaster
ENSLBEG00000020394	rpusd4	90	79.439	ENSMMOG00000021731	rpusd4	96	79.439	Mola_mola
ENSLBEG00000020394	rpusd4	92	51.351	ENSMODG00000004521	RPUSD4	84	51.351	Monodelphis_domestica
ENSLBEG00000020394	rpusd4	87	79.935	ENSMALG00000005839	rpusd4	96	78.549	Monopterus_albus
ENSLBEG00000020394	rpusd4	91	51.524	MGP_CAROLIEiJ_G0031954	Rpusd4	86	51.524	Mus_caroli
ENSLBEG00000020394	rpusd4	91	51.829	ENSMUSG00000032044	Rpusd4	86	51.829	Mus_musculus
ENSLBEG00000020394	rpusd4	91	51.829	MGP_PahariEiJ_G0014819	Rpusd4	86	51.829	Mus_pahari
ENSLBEG00000020394	rpusd4	91	51.829	MGP_SPRETEiJ_G0033078	Rpusd4	86	51.829	Mus_spretus
ENSLBEG00000020394	rpusd4	99	49.300	ENSMPUG00000006608	RPUSD4	93	49.300	Mustela_putorius_furo
ENSLBEG00000020394	rpusd4	90	53.416	ENSMLUG00000017328	-	83	53.416	Myotis_lucifugus
ENSLBEG00000020394	rpusd4	72	51.163	ENSMLUG00000029348	-	99	51.163	Myotis_lucifugus
ENSLBEG00000020394	rpusd4	91	54.878	ENSNGAG00000020847	Rpusd4	86	54.878	Nannospalax_galili
ENSLBEG00000020394	rpusd4	91	78.462	ENSNBRG00000005207	rpusd4	94	78.462	Neolamprologus_brichardi
ENSLBEG00000020394	rpusd4	99	47.887	ENSNLEG00000007465	RPUSD4	91	46.418	Nomascus_leucogenys
ENSLBEG00000020394	rpusd4	94	50.742	ENSMEUG00000004370	RPUSD4	89	50.742	Notamacropus_eugenii
ENSLBEG00000020394	rpusd4	92	51.212	ENSODEG00000004577	RPUSD4	86	51.212	Octodon_degus
ENSLBEG00000020394	rpusd4	93	78.012	ENSONIG00000018879	rpusd4	90	78.012	Oreochromis_niloticus
ENSLBEG00000020394	rpusd4	82	48.322	ENSOANG00000007247	RPUSD4	95	48.173	Ornithorhynchus_anatinus
ENSLBEG00000020394	rpusd4	91	51.662	ENSOCUG00000017039	RPUSD4	86	51.662	Oryctolagus_cuniculus
ENSLBEG00000020394	rpusd4	92	72.256	ENSORLG00000002750	rpusd4	94	69.322	Oryzias_latipes
ENSLBEG00000020394	rpusd4	93	70.920	ENSORLG00020002044	rpusd4	84	71.091	Oryzias_latipes_hni
ENSLBEG00000020394	rpusd4	93	71.045	ENSORLG00015020034	rpusd4	84	71.045	Oryzias_latipes_hsok
ENSLBEG00000020394	rpusd4	93	74.018	ENSOMEG00000004861	rpusd4	82	74.018	Oryzias_melastigma
ENSLBEG00000020394	rpusd4	90	52.308	ENSOGAG00000008922	RPUSD4	93	48.739	Otolemur_garnettii
ENSLBEG00000020394	rpusd4	90	52.484	ENSOARG00000012238	RPUSD4	82	52.484	Ovis_aries
ENSLBEG00000020394	rpusd4	90	50.621	ENSPPAG00000042883	RPUSD4	77	50.621	Pan_paniscus
ENSLBEG00000020394	rpusd4	91	50.305	ENSPPRG00000003081	RPUSD4	86	50.305	Panthera_pardus
ENSLBEG00000020394	rpusd4	91	50.305	ENSPTIG00000012059	RPUSD4	87	51.613	Panthera_tigris_altaica
ENSLBEG00000020394	rpusd4	90	50.621	ENSPTRG00000004454	RPUSD4	83	50.621	Pan_troglodytes
ENSLBEG00000020394	rpusd4	99	47.887	ENSPANG00000015040	RPUSD4	89	47.887	Papio_anubis
ENSLBEG00000020394	rpusd4	97	58.286	ENSPKIG00000023986	rpusd4	89	58.286	Paramormyrops_kingsleyae
ENSLBEG00000020394	rpusd4	83	53.872	ENSPSIG00000014268	RPUSD4	93	53.872	Pelodiscus_sinensis
ENSLBEG00000020394	rpusd4	92	71.084	ENSPMGG00000002806	rpusd4	92	69.880	Periophthalmus_magnuspinnatus
ENSLBEG00000020394	rpusd4	91	45.122	ENSPEMG00000000278	Rpusd4	85	45.122	Peromyscus_maniculatus_bairdii
ENSLBEG00000020394	rpusd4	87	40.000	ENSPMAG00000008183	rpusd4	97	40.000	Petromyzon_marinus
ENSLBEG00000020394	rpusd4	93	51.343	ENSPCIG00000010212	RPUSD4	90	51.343	Phascolarctos_cinereus
ENSLBEG00000020394	rpusd4	93	74.405	ENSPFOG00000019030	rpusd4	97	67.866	Poecilia_formosa
ENSLBEG00000020394	rpusd4	93	75.449	ENSPLAG00000016848	rpusd4	94	68.734	Poecilia_latipinna
ENSLBEG00000020394	rpusd4	93	74.850	ENSPMEG00000017534	rpusd4	94	68.217	Poecilia_mexicana
ENSLBEG00000020394	rpusd4	88	75.000	ENSPREG00000005689	rpusd4	90	68.750	Poecilia_reticulata
ENSLBEG00000020394	rpusd4	99	47.606	ENSPPYG00000004043	RPUSD4	89	47.606	Pongo_abelii
ENSLBEG00000020394	rpusd4	78	51.685	ENSPCAG00000000753	RPUSD4	75	51.685	Procavia_capensis
ENSLBEG00000020394	rpusd4	92	48.328	ENSPCOG00000020694	RPUSD4	87	48.328	Propithecus_coquereli
ENSLBEG00000020394	rpusd4	91	50.765	ENSPVAG00000000988	RPUSD4	97	47.956	Pteropus_vampyrus
ENSLBEG00000020394	rpusd4	93	77.711	ENSPNYG00000009652	rpusd4	93	70.052	Pundamilia_nyererei
ENSLBEG00000020394	rpusd4	94	58.876	ENSPNAG00000012264	rpusd4	89	58.876	Pygocentrus_nattereri
ENSLBEG00000020394	rpusd4	91	52.134	ENSRNOG00000011567	Rpusd4	86	52.134	Rattus_norvegicus
ENSLBEG00000020394	rpusd4	98	47.875	ENSRBIG00000034842	RPUSD4	89	47.606	Rhinopithecus_bieti
ENSLBEG00000020394	rpusd4	98	47.875	ENSRROG00000039753	RPUSD4	89	47.606	Rhinopithecus_roxellana
ENSLBEG00000020394	rpusd4	91	49.085	ENSSBOG00000030413	RPUSD4	87	49.085	Saimiri_boliviensis_boliviensis
ENSLBEG00000020394	rpusd4	83	52.508	ENSSHAG00000008304	RPUSD4	97	52.508	Sarcophilus_harrisii
ENSLBEG00000020394	rpusd4	93	58.580	ENSSFOG00015006203	rpusd4	91	58.580	Scleropages_formosus
ENSLBEG00000020394	rpusd4	93	77.273	ENSSMAG00000020978	rpusd4	97	69.018	Scophthalmus_maximus
ENSLBEG00000020394	rpusd4	93	81.325	ENSSDUG00000013399	rpusd4	100	71.253	Seriola_dumerili
ENSLBEG00000020394	rpusd4	93	81.928	ENSSLDG00000023507	rpusd4	100	71.744	Seriola_lalandi_dorsalis
ENSLBEG00000020394	rpusd4	83	54.362	ENSSPUG00000001401	RPUSD4	92	51.335	Sphenodon_punctatus
ENSLBEG00000020394	rpusd4	93	76.970	ENSSPAG00000012163	rpusd4	96	70.812	Stegastes_partitus
ENSLBEG00000020394	rpusd4	99	46.893	ENSSSCG00000015233	RPUSD4	93	46.893	Sus_scrofa
ENSLBEG00000020394	rpusd4	84	50.333	ENSTGUG00000000773	RPUSD4	99	50.333	Taeniopygia_guttata
ENSLBEG00000020394	rpusd4	93	74.848	ENSTRUG00000012283	rpusd4	99	65.897	Takifugu_rubripes
ENSLBEG00000020394	rpusd4	93	75.904	ENSTNIG00000014676	rpusd4	95	67.005	Tetraodon_nigroviridis
ENSLBEG00000020394	rpusd4	90	51.863	ENSTTRG00000001555	RPUSD4	83	51.863	Tursiops_truncatus
ENSLBEG00000020394	rpusd4	90	52.308	ENSUMAG00000002219	RPUSD4	85	52.308	Ursus_maritimus
ENSLBEG00000020394	rpusd4	64	50.000	ENSVPAG00000001066	RPUSD4	85	50.000	Vicugna_pacos
ENSLBEG00000020394	rpusd4	91	52.744	ENSVVUG00000020101	RPUSD4	85	52.744	Vulpes_vulpes
ENSLBEG00000020394	rpusd4	93	75.150	ENSXCOG00000004676	rpusd4	97	66.839	Xiphophorus_couchianus
ENSLBEG00000020394	rpusd4	94	74.556	ENSXMAG00000023351	rpusd4	96	67.602	Xiphophorus_maculatus