EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020461 (Gene tree)
Gene ID: 109990829
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 287-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6544 bases
Position: chrFKLU01000191.1:977525-984068
Accession: 109990829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000026946	zf-C2H2	PF00096.26	1.8e-19	1	3
ENSLBEP00000026946	zf-C2H2	PF00096.26	1.8e-19	2	3
ENSLBEP00000026946	zf-C2H2	PF00096.26	1.8e-19	3	3
ENSLBEP00000026941	zf-C2H2	PF00096.26	5.7e-13	1	2
ENSLBEP00000026941	zf-C2H2	PF00096.26	5.7e-13	2	2
ENSLBEP00000026946	zf-met	PF12874.7	6.6e-09	1	1
ENSLBEP00000026941	zf-met	PF12874.7	4.2e-07	1	2
ENSLBEP00000026941	zf-met	PF12874.7	4.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028245	-	2257	XM_020643070	ENSLBEP00000026946	380 (aa)	XP_020498726	UPI0009B43E91
ENSLBET00000028240	-	759	-	ENSLBEP00000026941	252 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000020461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020461	-	94	41.758	ENSLBEG00000025689	-	86	41.758
ENSLBEG00000020461	-	65	48.101	ENSLBEG00000017726	-	88	48.101
ENSLBEG00000020461	-	58	43.333	ENSLBEG00000020747	-	86	43.333
ENSLBEG00000020461	-	89	45.556	ENSLBEG00000000369	-	99	45.556
ENSLBEG00000020461	-	99	33.784	ENSLBEG00000011210	-	85	33.784
ENSLBEG00000020461	-	99	41.935	ENSLBEG00000011006	-	98	41.935
ENSLBEG00000020461	-	98	39.080	ENSLBEG00000026552	-	97	39.080
ENSLBEG00000020461	-	96	46.341	ENSLBEG00000014211	-	99	45.977
ENSLBEG00000020461	-	57	52.830	ENSLBEG00000026457	-	92	44.340
ENSLBEG00000020461	-	92	51.136	ENSLBEG00000004805	-	93	51.136
ENSLBEG00000020461	-	92	51.852	ENSLBEG00000011349	-	77	51.852
ENSLBEG00000020461	-	50	38.971	ENSLBEG00000001756	-	83	49.206
ENSLBEG00000020461	-	50	48.750	ENSLBEG00000024509	-	95	51.064
ENSLBEG00000020461	-	89	31.004	ENSLBEG00000006161	-	73	47.674
ENSLBEG00000020461	-	75	37.410	ENSLBEG00000008115	-	95	41.935
ENSLBEG00000020461	-	92	42.105	ENSLBEG00000009567	-	84	46.914
ENSLBEG00000020461	-	92	42.308	ENSLBEG00000014263	-	100	31.579
ENSLBEG00000020461	-	90	45.679	ENSLBEG00000004867	-	91	45.679
ENSLBEG00000020461	-	92	53.333	ENSLBEG00000024737	-	98	53.333
ENSLBEG00000020461	-	84	48.780	ENSLBEG00000002278	-	78	48.780
ENSLBEG00000020461	-	58	43.158	ENSLBEG00000020128	-	95	49.091
ENSLBEG00000020461	-	51	40.496	ENSLBEG00000014282	-	79	40.496
ENSLBEG00000020461	-	66	43.333	ENSLBEG00000020297	gfi1b	81	43.333
ENSLBEG00000020461	-	99	44.340	ENSLBEG00000008733	-	99	44.340
ENSLBEG00000020461	-	50	45.161	ENSLBEG00000018509	-	88	45.556
ENSLBEG00000020461	-	75	44.565	ENSLBEG00000010132	-	99	44.565
ENSLBEG00000020461	-	55	50.980	ENSLBEG00000014527	-	51	41.045
ENSLBEG00000020461	-	52	44.156	ENSLBEG00000025305	-	86	32.886
ENSLBEG00000020461	-	55	50.980	ENSLBEG00000008320	-	64	39.098
ENSLBEG00000020461	-	52	42.857	ENSLBEG00000028243	-	82	39.490
ENSLBEG00000020461	-	92	47.191	ENSLBEG00000028628	znf1174	73	47.191
ENSLBEG00000020461	-	92	41.758	ENSLBEG00000008606	-	97	47.500
ENSLBEG00000020461	-	97	42.697	ENSLBEG00000015694	-	95	42.697
ENSLBEG00000020461	-	69	42.424	ENSLBEG00000008689	-	91	39.130
ENSLBEG00000020461	-	90	49.451	ENSLBEG00000000343	-	98	49.451
ENSLBEG00000020461	-	92	51.111	ENSLBEG00000011289	-	91	43.220
ENSLBEG00000020461	-	58	43.333	ENSLBEG00000011751	znf526	51	36.842
ENSLBEG00000020461	-	90	45.679	ENSLBEG00000000393	-	89	45.679
ENSLBEG00000020461	-	96	52.222	ENSLBEG00000011313	-	97	43.860
ENSLBEG00000020461	-	98	32.292	ENSLBEG00000008850	-	97	32.292
ENSLBEG00000020461	-	59	45.614	ENSLBEG00000009580	-	68	45.614
ENSLBEG00000020461	-	57	32.704	ENSLBEG00000026573	-	64	32.704
ENSLBEG00000020461	-	96	49.462	ENSLBEG00000013570	-	98	51.111
ENSLBEG00000020461	-	67	39.773	ENSLBEG00000008439	znf319b	86	35.000
ENSLBEG00000020461	-	95	47.115	ENSLBEG00000010278	-	92	50.000
ENSLBEG00000020461	-	90	46.809	ENSLBEG00000002357	-	99	46.809
ENSLBEG00000020461	-	92	43.000	ENSLBEG00000011250	-	99	40.909
ENSLBEG00000020461	-	55	46.429	ENSLBEG00000005307	znf236	53	46.429
ENSLBEG00000020461	-	57	54.054	ENSLBEG00000010165	-	88	53.846
ENSLBEG00000020461	-	92	50.000	ENSLBEG00000000373	-	93	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020461	-	92	47.312	ENSACIG00000000360	si:ch211-241b2.1	98	47.312	Amphilophus_citrinellus
ENSLBEG00000020461	-	99	62.879	ENSAOCG00000021565	-	99	63.131	Amphiprion_ocellaris
ENSLBEG00000020461	-	89	42.500	ENSATEG00000008683	si:ch211-241b2.1	90	42.500	Anabas_testudineus
ENSLBEG00000020461	-	92	48.889	ENSACLG00000024670	-	95	47.826	Astatotilapia_calliptera
ENSLBEG00000020461	-	92	48.235	ENSDARG00000053165	zgc:113377	99	50.000	Danio_rerio
ENSLBEG00000020461	-	50	49.515	ENSDARG00000098613	si:dkey-15h8.16	74	49.515	Danio_rerio
ENSLBEG00000020461	-	57	46.667	ENSDARG00000088507	znf982	79	47.368	Danio_rerio
ENSLBEG00000020461	-	92	46.667	ENSDARG00000100882	znf1154	91	46.667	Danio_rerio
ENSLBEG00000020461	-	100	45.614	ENSELUG00000008131	-	100	45.614	Esox_lucius
ENSLBEG00000020461	-	91	46.341	ENSFHEG00000013152	-	86	46.341	Fundulus_heteroclitus
ENSLBEG00000020461	-	93	43.617	ENSFHEG00000014023	-	77	44.828	Fundulus_heteroclitus
ENSLBEG00000020461	-	92	49.231	ENSHBUG00000018916	-	88	49.367	Haplochromis_burtoni
ENSLBEG00000020461	-	96	41.573	ENSHBUG00000009953	-	88	50.000	Haplochromis_burtoni
ENSLBEG00000020461	-	92	37.736	ENSKMAG00000014629	-	96	41.026	Kryptolebias_marmoratus
ENSLBEG00000020461	-	99	31.313	ENSMAMG00000014743	-	71	44.444	Mastacembelus_armatus
ENSLBEG00000020461	-	67	55.263	ENSMZEG00005027943	-	95	55.263	Maylandia_zebra
ENSLBEG00000020461	-	50	47.778	ENSMZEG00005027793	-	85	39.437	Maylandia_zebra
ENSLBEG00000020461	-	90	50.000	ENSMZEG00005026470	-	82	50.000	Maylandia_zebra
ENSLBEG00000020461	-	56	47.368	ENSMZEG00005025729	-	90	47.368	Maylandia_zebra
ENSLBEG00000020461	-	59	40.764	ENSMZEG00005021426	-	75	52.174	Maylandia_zebra
ENSLBEG00000020461	-	91	44.715	ENSMALG00000018074	-	98	44.715	Monopterus_albus
ENSLBEG00000020461	-	92	51.613	ENSNBRG00000000577	-	95	51.613	Neolamprologus_brichardi
ENSLBEG00000020461	-	65	48.315	ENSPKIG00000019848	-	52	48.315	Paramormyrops_kingsleyae
ENSLBEG00000020461	-	81	46.575	ENSPKIG00000020324	-	78	46.575	Paramormyrops_kingsleyae
ENSLBEG00000020461	-	63	55.556	ENSPFOG00000001144	-	99	52.381	Poecilia_formosa
ENSLBEG00000020461	-	96	51.064	ENSPLAG00000016561	zgc:113348	92	50.538	Poecilia_latipinna
ENSLBEG00000020461	-	51	41.176	ENSSPAG00000006539	-	95	41.176	Stegastes_partitus
ENSLBEG00000020461	-	58	50.725	ENSXCOG00000017871	zgc:113343	69	50.725	Xiphophorus_couchianus