EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020488 (Gene tree)
Gene ID: 109989647
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 20294 bases
Position: chrFKLU01000165.1:868157-888450
Accession: 109989647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027105	PUF	PF00806.19	1.1e-69	1	7
ENSLBEP00000027105	PUF	PF00806.19	1.1e-69	2	7
ENSLBEP00000027105	PUF	PF00806.19	1.1e-69	3	7
ENSLBEP00000027105	PUF	PF00806.19	1.1e-69	4	7
ENSLBEP00000027105	PUF	PF00806.19	1.1e-69	5	7
ENSLBEP00000027105	PUF	PF00806.19	1.1e-69	6	7
ENSLBEP00000027105	PUF	PF00806.19	1.1e-69	7	7
ENSLBEP00000027067	PUF	PF00806.19	1.4e-69	1	7
ENSLBEP00000027067	PUF	PF00806.19	1.4e-69	2	7
ENSLBEP00000027067	PUF	PF00806.19	1.4e-69	3	7
ENSLBEP00000027067	PUF	PF00806.19	1.4e-69	4	7
ENSLBEP00000027067	PUF	PF00806.19	1.4e-69	5	7
ENSLBEP00000027067	PUF	PF00806.19	1.4e-69	6	7
ENSLBEP00000027067	PUF	PF00806.19	1.4e-69	7	7
ENSLBEP00000027044	PUF	PF00806.19	1.5e-67	1	7
ENSLBEP00000027044	PUF	PF00806.19	1.5e-67	2	7
ENSLBEP00000027044	PUF	PF00806.19	1.5e-67	3	7
ENSLBEP00000027044	PUF	PF00806.19	1.5e-67	4	7
ENSLBEP00000027044	PUF	PF00806.19	1.5e-67	5	7
ENSLBEP00000027044	PUF	PF00806.19	1.5e-67	6	7
ENSLBEP00000027044	PUF	PF00806.19	1.5e-67	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028345	-	7167	XM_020641481	ENSLBEP00000027044	1208 (aa)	XP_020497137	UPI0009B2EF91
ENSLBET00000028368	-	7095	XM_020641487	ENSLBEP00000027067	1184 (aa)	XP_020497143	-
ENSLBET00000028406	-	3471	-	ENSLBEP00000027105	1156 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000020488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020488	pum2	60	78.667	ENSLBEG00000002527	pum1	97	65.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020488	pum2	82	85.590	ENSG00000055917	PUM2	96	90.998	Homo_sapiens
ENSLBEG00000020488	pum2	90	76.362	ENSAMEG00000002823	PUM2	100	73.611	Ailuropoda_melanoleuca
ENSLBEG00000020488	pum2	91	99.370	ENSACIG00000010646	pum2	96	99.370	Amphilophus_citrinellus
ENSLBEG00000020488	pum2	99	94.550	ENSAOCG00000016619	pum2	99	94.550	Amphiprion_ocellaris
ENSLBEG00000020488	pum2	100	96.290	ENSAPEG00000019924	pum2	100	98.783	Amphiprion_percula
ENSLBEG00000020488	pum2	100	93.817	ENSATEG00000015030	pum2	100	94.312	Anabas_testudineus
ENSLBEG00000020488	pum2	100	72.591	ENSAPLG00000010496	PUM2	100	71.024	Anas_platyrhynchos
ENSLBEG00000020488	pum2	90	75.185	ENSACAG00000010491	PUM2	100	72.315	Anolis_carolinensis
ENSLBEG00000020488	pum2	87	85.590	ENSANAG00000021807	PUM2	96	90.998	Aotus_nancymaae
ENSLBEG00000020488	pum2	100	94.399	ENSACLG00000022532	pum2	100	94.646	Astatotilapia_calliptera
ENSLBEG00000020488	pum2	83	91.304	ENSBTAG00000011155	PUM2	99	91.241	Bos_taurus
ENSLBEG00000020488	pum2	87	85.590	ENSCJAG00000007450	PUM2	96	90.998	Callithrix_jacchus
ENSLBEG00000020488	pum2	90	75.970	ENSCAFG00000003839	PUM2	100	73.216	Canis_familiaris
ENSLBEG00000020488	pum2	83	91.063	ENSCAFG00020025689	PUM2	99	90.998	Canis_lupus_dingo
ENSLBEG00000020488	pum2	83	91.304	ENSCHIG00000022180	PUM2	99	91.241	Capra_hircus
ENSLBEG00000020488	pum2	86	85.371	ENSTSYG00000014463	PUM2	96	90.998	Carlito_syrichta
ENSLBEG00000020488	pum2	89	87.952	ENSCAPG00000016888	PUM2	99	85.412	Cavia_aperea
ENSLBEG00000020488	pum2	87	85.590	ENSCPOG00000031996	PUM2	96	90.998	Cavia_porcellus
ENSLBEG00000020488	pum2	82	85.590	ENSCCAG00000037035	PUM2	96	90.998	Cebus_capucinus
ENSLBEG00000020488	pum2	82	85.590	ENSCATG00000043826	PUM2	96	90.998	Cercocebus_atys
ENSLBEG00000020488	pum2	87	86.026	ENSCLAG00000006048	PUM2	96	90.998	Chinchilla_lanigera
ENSLBEG00000020488	pum2	90	76.688	ENSCSAG00000008087	PUM2	100	73.173	Chlorocebus_sabaeus
ENSLBEG00000020488	pum2	73	71.552	ENSCHOG00000004575	PUM2	79	74.074	Choloepus_hoffmanni
ENSLBEG00000020488	pum2	90	90.268	ENSCPBG00000019966	PUM2	99	90.268	Chrysemys_picta_bellii
ENSLBEG00000020488	pum2	82	85.590	ENSCANG00000032797	PUM2	96	90.998	Colobus_angolensis_palliatus
ENSLBEG00000020488	pum2	87	85.590	ENSCGRG00001025023	Pum2	96	90.998	Cricetulus_griseus_chok1gshd
ENSLBEG00000020488	pum2	87	85.590	ENSCGRG00000001580	Pum2	96	90.998	Cricetulus_griseus_crigri
ENSLBEG00000020488	pum2	100	93.311	ENSCSEG00000020899	pum2	100	93.394	Cynoglossus_semilaevis
ENSLBEG00000020488	pum2	100	94.142	ENSCVAG00000002426	pum2	100	94.142	Cyprinodon_variegatus
ENSLBEG00000020488	pum2	100	86.829	ENSDARG00000061040	pum2	100	86.074	Danio_rerio
ENSLBEG00000020488	pum2	73	92.000	ENSDNOG00000006733	PUM2	99	91.892	Dasypus_novemcinctus
ENSLBEG00000020488	pum2	90	72.458	ENSDORG00000011453	Pum2	100	68.750	Dipodomys_ordii
ENSLBEG00000020488	pum2	77	90.747	ENSETEG00000017683	PUM2	79	90.747	Echinops_telfairi
ENSLBEG00000020488	pum2	64	61.548	ENSEBUG00000014828	pum2	92	59.497	Eptatretus_burgeri
ENSLBEG00000020488	pum2	85	60.155	ENSEBUG00000004435	pum2	96	57.854	Eptatretus_burgeri
ENSLBEG00000020488	pum2	83	91.063	ENSEASG00005009429	PUM2	99	90.998	Equus_asinus_asinus
ENSLBEG00000020488	pum2	83	91.063	ENSECAG00000021930	PUM2	99	90.998	Equus_caballus
ENSLBEG00000020488	pum2	68	69.231	ENSEEUG00000003224	-	74	69.231	Erinaceus_europaeus
ENSLBEG00000020488	pum2	100	89.517	ENSELUG00000014997	pum2	100	89.189	Esox_lucius
ENSLBEG00000020488	pum2	78	90.821	ENSFCAG00000027520	PUM2	99	90.754	Felis_catus
ENSLBEG00000020488	pum2	90	75.301	ENSFALG00000001759	PUM2	100	73.173	Ficedula_albicollis
ENSLBEG00000020488	pum2	90	75.923	ENSFDAG00000019685	PUM2	96	90.511	Fukomys_damarensis
ENSLBEG00000020488	pum2	100	93.683	ENSFHEG00000021596	pum2	99	99.027	Fundulus_heteroclitus
ENSLBEG00000020488	pum2	90	88.022	ENSGMOG00000006903	pum2	100	88.394	Gadus_morhua
ENSLBEG00000020488	pum2	79	90.511	ENSGALG00000016481	PUM2	92	90.511	Gallus_gallus
ENSLBEG00000020488	pum2	100	94.477	ENSGAFG00000013691	pum2	99	99.029	Gambusia_affinis
ENSLBEG00000020488	pum2	90	93.097	ENSGACG00000009670	pum2	100	92.817	Gasterosteus_aculeatus
ENSLBEG00000020488	pum2	100	73.476	ENSGAGG00000020698	PUM2	100	73.080	Gopherus_agassizii
ENSLBEG00000020488	pum2	82	85.590	ENSGGOG00000011374	PUM2	96	90.998	Gorilla_gorilla
ENSLBEG00000020488	pum2	100	94.937	ENSHBUG00000016453	pum2	100	85.798	Haplochromis_burtoni
ENSLBEG00000020488	pum2	87	84.716	ENSHGLG00000007892	PUM2	96	90.024	Heterocephalus_glaber_female
ENSLBEG00000020488	pum2	90	75.808	ENSHGLG00100015510	PUM2	100	72.946	Heterocephalus_glaber_male
ENSLBEG00000020488	pum2	100	92.689	ENSHCOG00000010119	pum2	100	93.361	Hippocampus_comes
ENSLBEG00000020488	pum2	87	85.590	ENSSTOG00000006262	PUM2	96	90.998	Ictidomys_tridecemlineatus
ENSLBEG00000020488	pum2	87	85.590	ENSJJAG00000020969	Pum2	96	90.998	Jaculus_jaculus
ENSLBEG00000020488	pum2	100	92.834	ENSKMAG00000017216	pum2	100	93.493	Kryptolebias_marmoratus
ENSLBEG00000020488	pum2	100	74.487	ENSLACG00000008723	PUM2	100	73.361	Latimeria_chalumnae
ENSLBEG00000020488	pum2	100	77.082	ENSLOCG00000017196	pum2	100	75.802	Lepisosteus_oculatus
ENSLBEG00000020488	pum2	90	76.015	ENSLAFG00000009278	PUM2	100	72.878	Loxodonta_africana
ENSLBEG00000020488	pum2	82	85.590	ENSMFAG00000000492	PUM2	96	90.998	Macaca_fascicularis
ENSLBEG00000020488	pum2	87	85.590	ENSMMUG00000023181	PUM2	96	90.998	Macaca_mulatta
ENSLBEG00000020488	pum2	87	85.590	ENSMNEG00000039659	PUM2	96	90.998	Macaca_nemestrina
ENSLBEG00000020488	pum2	82	85.590	ENSMLEG00000039243	PUM2	96	90.998	Mandrillus_leucophaeus
ENSLBEG00000020488	pum2	100	95.789	ENSMAMG00000006121	pum2	100	95.789	Mastacembelus_armatus
ENSLBEG00000020488	pum2	100	94.399	ENSMZEG00005000791	pum2	100	94.646	Maylandia_zebra
ENSLBEG00000020488	pum2	90	75.000	ENSMGAG00000014040	PUM2	100	72.886	Meleagris_gallopavo
ENSLBEG00000020488	pum2	90	76.966	ENSMAUG00000000311	Pum2	100	73.451	Mesocricetus_auratus
ENSLBEG00000020488	pum2	82	85.590	ENSMICG00000011647	PUM2	96	90.998	Microcebus_murinus
ENSLBEG00000020488	pum2	90	76.688	ENSMOCG00000013663	Pum2	100	73.587	Microtus_ochrogaster
ENSLBEG00000020488	pum2	90	90.909	ENSMMOG00000002975	pum2	100	91.922	Mola_mola
ENSLBEG00000020488	pum2	90	73.413	ENSMODG00000009811	PUM2	100	70.469	Monodelphis_domestica
ENSLBEG00000020488	pum2	81	98.540	ENSMALG00000022313	pum2	99	98.540	Monopterus_albus
ENSLBEG00000020488	pum2	87	85.590	MGP_CAROLIEiJ_G0017603	Pum2	96	90.998	Mus_caroli
ENSLBEG00000020488	pum2	87	85.371	ENSMUSG00000020594	Pum2	96	90.754	Mus_musculus
ENSLBEG00000020488	pum2	87	85.590	MGP_PahariEiJ_G0029361	Pum2	96	90.998	Mus_pahari
ENSLBEG00000020488	pum2	87	85.371	MGP_SPRETEiJ_G0018447	Pum2	96	90.754	Mus_spretus
ENSLBEG00000020488	pum2	90	76.155	ENSMPUG00000013734	PUM2	100	73.401	Mustela_putorius_furo
ENSLBEG00000020488	pum2	90	75.646	ENSMLUG00000007362	PUM2	100	72.895	Myotis_lucifugus
ENSLBEG00000020488	pum2	90	76.852	ENSNGAG00000016665	-	100	73.377	Nannospalax_galili
ENSLBEG00000020488	pum2	90	53.825	ENSNGAG00000016239	-	99	50.618	Nannospalax_galili
ENSLBEG00000020488	pum2	79	91.063	ENSNLEG00000002509	PUM2	96	90.998	Nomascus_leucogenys
ENSLBEG00000020488	pum2	84	71.963	ENSMEUG00000016567	PUM2	100	66.113	Notamacropus_eugenii
ENSLBEG00000020488	pum2	69	69.912	ENSOPRG00000001963	PUM2	93	59.781	Ochotona_princeps
ENSLBEG00000020488	pum2	90	76.433	ENSODEG00000007823	PUM2	96	91.241	Octodon_degus
ENSLBEG00000020488	pum2	100	94.370	ENSONIG00000006119	pum2	100	94.622	Oreochromis_niloticus
ENSLBEG00000020488	pum2	90	76.155	ENSOCUG00000017908	PUM2	100	73.013	Oryctolagus_cuniculus
ENSLBEG00000020488	pum2	100	90.594	ENSORLG00000012611	pum2	99	97.805	Oryzias_latipes
ENSLBEG00000020488	pum2	100	90.594	ENSORLG00020014452	pum2	99	97.805	Oryzias_latipes_hni
ENSLBEG00000020488	pum2	100	90.429	ENSORLG00015009427	pum2	100	91.172	Oryzias_latipes_hsok
ENSLBEG00000020488	pum2	85	92.428	ENSOMEG00000005889	pum2	99	97.805	Oryzias_melastigma
ENSLBEG00000020488	pum2	85	86.058	ENSOGAG00000002187	PUM2	96	92.141	Otolemur_garnettii
ENSLBEG00000020488	pum2	90	75.830	ENSOARG00000017236	PUM2	100	73.080	Ovis_aries
ENSLBEG00000020488	pum2	82	85.590	ENSPPAG00000023095	PUM2	96	90.998	Pan_paniscus
ENSLBEG00000020488	pum2	78	90.821	ENSPPRG00000021443	PUM2	99	90.754	Panthera_pardus
ENSLBEG00000020488	pum2	78	90.821	ENSPTIG00000018982	PUM2	99	90.754	Panthera_tigris_altaica
ENSLBEG00000020488	pum2	82	85.590	ENSPTRG00000011692	PUM2	96	90.998	Pan_troglodytes
ENSLBEG00000020488	pum2	90	66.024	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSLBEG00000020488	pum2	100	73.476	ENSPSIG00000011626	PUM2	99	71.499	Pelodiscus_sinensis
ENSLBEG00000020488	pum2	90	76.944	ENSPEMG00000008357	Pum2	100	73.426	Peromyscus_maniculatus_bairdii
ENSLBEG00000020488	pum2	90	62.238	ENSPMAG00000007038	pum2	100	59.364	Petromyzon_marinus
ENSLBEG00000020488	pum2	84	85.404	ENSPCIG00000022139	PUM2	99	88.293	Phascolarctos_cinereus
ENSLBEG00000020488	pum2	100	94.559	ENSPFOG00000019208	pum2	100	94.394	Poecilia_formosa
ENSLBEG00000020488	pum2	100	94.641	ENSPLAG00000001826	pum2	99	99.029	Poecilia_latipinna
ENSLBEG00000020488	pum2	100	94.559	ENSPMEG00000015766	pum2	100	94.394	Poecilia_mexicana
ENSLBEG00000020488	pum2	81	98.786	ENSPREG00000006905	pum2	99	98.786	Poecilia_reticulata
ENSLBEG00000020488	pum2	90	76.781	ENSPPYG00000012617	PUM2	100	73.265	Pongo_abelii
ENSLBEG00000020488	pum2	63	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSLBEG00000020488	pum2	86	85.590	ENSPCOG00000019636	PUM2	96	90.998	Propithecus_coquereli
ENSLBEG00000020488	pum2	88	70.986	ENSPVAG00000002920	PUM2	100	68.173	Pteropus_vampyrus
ENSLBEG00000020488	pum2	100	94.316	ENSPNYG00000022901	pum2	100	94.563	Pundamilia_nyererei
ENSLBEG00000020488	pum2	98	88.927	ENSPNAG00000008025	pum2	99	94.390	Pygocentrus_nattereri
ENSLBEG00000020488	pum2	87	85.153	ENSRNOG00000006180	Pum2	96	90.511	Rattus_norvegicus
ENSLBEG00000020488	pum2	87	85.590	ENSRBIG00000044880	PUM2	96	90.998	Rhinopithecus_bieti
ENSLBEG00000020488	pum2	82	85.590	ENSSBOG00000022007	PUM2	96	90.998	Saimiri_boliviensis_boliviensis
ENSLBEG00000020488	pum2	84	84.813	ENSSHAG00000002778	PUM2	100	69.336	Sarcophilus_harrisii
ENSLBEG00000020488	pum2	91	77.386	ENSSFOG00015003476	pum2	99	76.166	Scleropages_formosus
ENSLBEG00000020488	pum2	100	94.733	ENSSMAG00000018236	pum2	100	95.062	Scophthalmus_maximus
ENSLBEG00000020488	pum2	96	95.000	ENSSDUG00000001800	pum2	99	95.158	Seriola_dumerili
ENSLBEG00000020488	pum2	100	96.290	ENSSLDG00000000981	pum2	100	96.290	Seriola_lalandi_dorsalis
ENSLBEG00000020488	pum2	86	67.040	ENSSARG00000010992	PUM2	86	65.804	Sorex_araneus
ENSLBEG00000020488	pum2	89	75.421	ENSSPUG00000017012	PUM2	99	73.458	Sphenodon_punctatus
ENSLBEG00000020488	pum2	100	96.208	ENSSPAG00000022948	pum2	100	96.208	Stegastes_partitus
ENSLBEG00000020488	pum2	83	91.063	ENSSSCG00000008600	PUM2	99	90.998	Sus_scrofa
ENSLBEG00000020488	pum2	90	75.208	ENSTGUG00000013149	PUM2	100	73.080	Taeniopygia_guttata
ENSLBEG00000020488	pum2	100	89.217	ENSTRUG00000018167	pum2	100	89.280	Takifugu_rubripes
ENSLBEG00000020488	pum2	100	91.046	ENSTNIG00000003116	pum2	100	91.381	Tetraodon_nigroviridis
ENSLBEG00000020488	pum2	71	89.095	ENSTBEG00000008729	PUM2	79	86.071	Tupaia_belangeri
ENSLBEG00000020488	pum2	90	75.786	ENSTTRG00000004887	PUM2	100	73.123	Tursiops_truncatus
ENSLBEG00000020488	pum2	66	81.290	ENSUAMG00000008120	PUM2	97	77.562	Ursus_americanus
ENSLBEG00000020488	pum2	83	91.063	ENSUMAG00000023198	PUM2	99	90.998	Ursus_maritimus
ENSLBEG00000020488	pum2	90	75.878	ENSVPAG00000005056	PUM2	100	73.494	Vicugna_pacos
ENSLBEG00000020488	pum2	83	91.063	ENSVVUG00000014829	PUM2	99	90.998	Vulpes_vulpes
ENSLBEG00000020488	pum2	100	69.652	ENSXETG00000008903	pum2	100	67.547	Xenopus_tropicalis
ENSLBEG00000020488	pum2	96	90.739	ENSXCOG00000002556	pum2	99	95.042	Xiphophorus_couchianus
ENSLBEG00000020488	pum2	100	94.559	ENSXMAG00000017682	pum2	99	99.029	Xiphophorus_maculatus