EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000020569 (Gene tree)
Gene ID
110001222
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
12551 bases
Position
chrFKLU01000774.1:84117-96667
Accession
110001222
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000027132CPSF73-100_CPF11718.85.6e-4111
ENSLBEP00000027132Beta-CaspPF10996.81.3e-2111
ENSLBEP00000027132Lactamase_BPF00753.273e-1811
ENSLBEP00000027132RMMBLPF07521.123e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000028433-1983XM_020656667ENSLBEP00000027132660 (aa)XP_020512323-
Gene Model
Click here to download ENSLBEG00000020569's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020569's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000020569cpsf38987.705ENSLBEG00000013492CPSF39287.705
ENSLBEG00000020569cpsf36338.657ENSLBEG00000011392ints117338.657
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000020569cpsf39478.971ENSG00000119203CPSF310098.529Homo_sapiens
ENSLBEG00000020569cpsf39686.131ENSAPOG00000022087cpsf39986.131Acanthochromis_polyacanthus
ENSLBEG00000020569cpsf37491.356ENSAPOG00000012241CPSF39191.356Acanthochromis_polyacanthus
ENSLBEG00000020569cpsf39479.295ENSAMEG00000008493CPSF39979.295Ailuropoda_melanoleuca
ENSLBEG00000020569cpsf38682.986ENSACIG00000009846cpsf39977.047Amphilophus_citrinellus
ENSLBEG00000020569cpsf38679.206ENSACIG00000023663CPSF39973.768Amphilophus_citrinellus
ENSLBEG00000020569cpsf39688.855ENSAOCG00000022056cpsf39988.855Amphiprion_ocellaris
ENSLBEG00000020569cpsf39682.267ENSAOCG00000010077CPSF39982.267Amphiprion_ocellaris
ENSLBEG00000020569cpsf39682.267ENSAPEG00000021167CPSF39982.267Amphiprion_percula
ENSLBEG00000020569cpsf39686.131ENSAPEG00000019526cpsf39986.131Amphiprion_percula
ENSLBEG00000020569cpsf39686.297ENSATEG00000003959cpsf310086.297Anabas_testudineus
ENSLBEG00000020569cpsf39680.924ENSATEG00000014525CPSF39980.924Anabas_testudineus
ENSLBEG00000020569cpsf39378.806ENSAPLG00000006941CPSF39878.806Anas_platyrhynchos
ENSLBEG00000020569cpsf38777.129ENSACAG00000001759CPSF39977.129Anolis_carolinensis
ENSLBEG00000020569cpsf39473.971ENSANAG00000031254CPSF39974.174Aotus_nancymaae
ENSLBEG00000020569cpsf39682.278ENSACLG00000014484cpsf39985.606Astatotilapia_calliptera
ENSLBEG00000020569cpsf38679.524ENSACLG00000018846CPSF39979.524Astatotilapia_calliptera
ENSLBEG00000020569cpsf39680.959ENSAMXG00000004786cpsf39980.959Astyanax_mexicanus
ENSLBEG00000020569cpsf39479.295ENSBTAG00000019735CPSF39979.295Bos_taurus
ENSLBEG00000020569cpsf38655.960WBGene00013460cpsf-38555.960Caenorhabditis_elegans
ENSLBEG00000020569cpsf39478.971ENSCJAG00000006276CPSF39978.971Callithrix_jacchus
ENSLBEG00000020569cpsf39479.412ENSCAFG00000003375CPSF39579.412Canis_familiaris
ENSLBEG00000020569cpsf38686.678ENSCAFG00020026799CPSF39686.678Canis_lupus_dingo
ENSLBEG00000020569cpsf39479.295ENSCHIG00000013973CPSF39979.295Capra_hircus
ENSLBEG00000020569cpsf39479.265ENSTSYG00000002967CPSF39979.265Carlito_syrichta
ENSLBEG00000020569cpsf39279.850ENSCAPG00000013851CPSF39979.850Cavia_aperea
ENSLBEG00000020569cpsf39479.706ENSCPOG00000011299CPSF39979.706Cavia_porcellus
ENSLBEG00000020569cpsf39478.971ENSCCAG00000036730CPSF39978.971Cebus_capucinus
ENSLBEG00000020569cpsf39479.758ENSCATG00000014770CPSF39987.047Cercocebus_atys
ENSLBEG00000020569cpsf39479.559ENSCLAG00000002727CPSF39979.559Chinchilla_lanigera
ENSLBEG00000020569cpsf39474.102ENSCSAG00000007125CPSF39974.102Chlorocebus_sabaeus
ENSLBEG00000020569cpsf380100.000ENSCHOG00000000180CPSF38558.627Choloepus_hoffmanni
ENSLBEG00000020569cpsf39678.374ENSCPBG00000014074CPSF39978.374Chrysemys_picta_bellii
ENSLBEG00000020569cpsf39463.274ENSCING00000007214-9763.274Ciona_intestinalis
ENSLBEG00000020569cpsf39472.440ENSCANG00000034435CPSF39972.440Colobus_angolensis_palliatus
ENSLBEG00000020569cpsf39478.824ENSCGRG00001013134Cpsf39978.824Cricetulus_griseus_chok1gshd
ENSLBEG00000020569cpsf39478.824ENSCGRG00000018319Cpsf39978.824Cricetulus_griseus_crigri
ENSLBEG00000020569cpsf39680.580ENSCSEG00000002021CPSF39980.580Cynoglossus_semilaevis
ENSLBEG00000020569cpsf39681.250ENSCVAG00000015067CPSF39981.250Cyprinodon_variegatus
ENSLBEG00000020569cpsf39680.814ENSDARG00000027649cpsf39980.814Danio_rerio
ENSLBEG00000020569cpsf39478.299ENSDNOG00000008940CPSF39578.299Dasypus_novemcinctus
ENSLBEG00000020569cpsf39282.595ENSDORG00000014263Cpsf39782.595Dipodomys_ordii
ENSLBEG00000020569cpsf39562.757FBgn0261065Cpsf739962.463Drosophila_melanogaster
ENSLBEG00000020569cpsf39171.108ENSETEG00000003893CPSF39671.108Echinops_telfairi
ENSLBEG00000020569cpsf39670.339ENSEBUG00000009018cpsf39970.339Eptatretus_burgeri
ENSLBEG00000020569cpsf39479.295ENSEASG00005003970CPSF39979.295Equus_asinus_asinus
ENSLBEG00000020569cpsf39479.295ENSECAG00000019911CPSF39686.678Equus_caballus
ENSLBEG00000020569cpsf39465.051ENSEEUG00000015422CPSF39965.051Erinaceus_europaeus
ENSLBEG00000020569cpsf39682.849ENSELUG00000013775cpsf39982.849Esox_lucius
ENSLBEG00000020569cpsf39479.295ENSFCAG00000007852CPSF39979.295Felis_catus
ENSLBEG00000020569cpsf38978.915ENSFALG00000006572CPSF39978.915Ficedula_albicollis
ENSLBEG00000020569cpsf39579.039ENSFDAG00000006317CPSF39979.039Fukomys_damarensis
ENSLBEG00000020569cpsf39683.480ENSFHEG00000014774cpsf39983.480Fundulus_heteroclitus
ENSLBEG00000020569cpsf35261.558ENSFHEG00000012186CPSF39961.558Fundulus_heteroclitus
ENSLBEG00000020569cpsf39682.945ENSGMOG00000003157cpsf39982.945Gadus_morhua
ENSLBEG00000020569cpsf39579.330ENSGALG00000016424CPSF39979.330Gallus_gallus
ENSLBEG00000020569cpsf38681.935ENSGAFG00000019449cpsf39976.065Gambusia_affinis
ENSLBEG00000020569cpsf39681.567ENSGAFG00000008016CPSF39981.567Gambusia_affinis
ENSLBEG00000020569cpsf36270.878ENSGAGG00000025583CPSF39370.878Gopherus_agassizii
ENSLBEG00000020569cpsf39477.122ENSGGOG00000001757CPSF39191.631Gorilla_gorilla
ENSLBEG00000020569cpsf35272.070ENSHBUG00000014332CPSF39972.070Haplochromis_burtoni
ENSLBEG00000020569cpsf39685.526ENSHBUG00000001188cpsf39985.526Haplochromis_burtoni
ENSLBEG00000020569cpsf39479.589ENSHGLG00000000666CPSF39979.589Heterocephalus_glaber_female
ENSLBEG00000020569cpsf39479.589ENSHGLG00100007765CPSF39979.589Heterocephalus_glaber_male
ENSLBEG00000020569cpsf39680.987ENSHCOG00000015957CPSF39980.987Hippocampus_comes
ENSLBEG00000020569cpsf39684.380ENSHCOG00000007251cpsf39984.380Hippocampus_comes
ENSLBEG00000020569cpsf39285.804ENSIPUG00000023488cpsf39981.541Ictalurus_punctatus
ENSLBEG00000020569cpsf39479.295ENSSTOG00000004476CPSF39979.295Ictidomys_tridecemlineatus
ENSLBEG00000020569cpsf39479.295ENSJJAG00000023415Cpsf39979.295Jaculus_jaculus
ENSLBEG00000020569cpsf39680.959ENSKMAG00000007317CPSF39980.959Kryptolebias_marmoratus
ENSLBEG00000020569cpsf39685.088ENSKMAG00000002806cpsf39985.088Kryptolebias_marmoratus
ENSLBEG00000020569cpsf39674.638ENSLACG00000008308CPSF39974.638Latimeria_chalumnae
ENSLBEG00000020569cpsf39681.187ENSLOCG00000016823cpsf39981.187Lepisosteus_oculatus
ENSLBEG00000020569cpsf39478.056ENSLAFG00000009467CPSF39978.056Loxodonta_africana
ENSLBEG00000020569cpsf39478.971ENSMFAG00000001339CPSF39488.981Macaca_fascicularis
ENSLBEG00000020569cpsf38786.167ENSMMUG00000018038CPSF39288.981Macaca_mulatta
ENSLBEG00000020569cpsf39470.509ENSMNEG00000039447CPSF39970.509Macaca_nemestrina
ENSLBEG00000020569cpsf39479.118ENSMLEG00000026825CPSF39291.435Mandrillus_leucophaeus
ENSLBEG00000020569cpsf39684.380ENSMAMG00000003076cpsf39984.380Mastacembelus_armatus
ENSLBEG00000020569cpsf38679.327ENSMAMG00000008835CPSF39979.327Mastacembelus_armatus
ENSLBEG00000020569cpsf39685.526ENSMZEG00005014358cpsf39985.526Maylandia_zebra
ENSLBEG00000020569cpsf39682.438ENSMZEG00005006258CPSF39982.438Maylandia_zebra
ENSLBEG00000020569cpsf39279.549ENSMGAG00000013995CPSF39979.549Meleagris_gallopavo
ENSLBEG00000020569cpsf39474.487ENSMICG00000002363CPSF39974.487Microcebus_murinus
ENSLBEG00000020569cpsf39482.071ENSMOCG00000020067Cpsf39982.071Microtus_ochrogaster
ENSLBEG00000020569cpsf39082.418ENSMMOG00000018212CPSF39982.418Mola_mola
ENSLBEG00000020569cpsf39653.823ENSMMOG00000011923CPSF39955.519Mola_mola
ENSLBEG00000020569cpsf39477.875ENSMODG00000014703CPSF39977.875Monodelphis_domestica
ENSLBEG00000020569cpsf38780.650ENSMALG00000011474CPSF39980.650Monopterus_albus
ENSLBEG00000020569cpsf39686.443ENSMALG00000016416cpsf39986.443Monopterus_albus
ENSLBEG00000020569cpsf39479.265MGP_CAROLIEiJ_G0017640Cpsf39979.265Mus_caroli
ENSLBEG00000020569cpsf39479.265ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSLBEG00000020569cpsf39479.118MGP_PahariEiJ_G0029397Cpsf39979.118Mus_pahari
ENSLBEG00000020569cpsf39479.265MGP_SPRETEiJ_G0018481Cpsf39979.265Mus_spretus
ENSLBEG00000020569cpsf39479.179ENSMPUG00000013213CPSF39979.179Mustela_putorius_furo
ENSLBEG00000020569cpsf39479.001ENSMLUG00000010636CPSF39979.001Myotis_lucifugus
ENSLBEG00000020569cpsf39479.736ENSNGAG00000019836Cpsf39979.736Nannospalax_galili
ENSLBEG00000020569cpsf38679.524ENSNBRG00000010525CPSF39979.524Neolamprologus_brichardi
ENSLBEG00000020569cpsf39685.526ENSNBRG00000004770cpsf39985.526Neolamprologus_brichardi
ENSLBEG00000020569cpsf39478.971ENSNLEG00000013359CPSF39191.631Nomascus_leucogenys
ENSLBEG00000020569cpsf39452.577ENSMEUG00000013117-9952.872Notamacropus_eugenii
ENSLBEG00000020569cpsf39470.925ENSOPRG00000008902CPSF39970.925Ochotona_princeps
ENSLBEG00000020569cpsf39479.853ENSODEG00000003129CPSF39979.853Octodon_degus
ENSLBEG00000020569cpsf39685.380ENSONIG00000018812cpsf39985.380Oreochromis_niloticus
ENSLBEG00000020569cpsf37674.911ENSOANG00000008577CPSF39974.911Ornithorhynchus_anatinus
ENSLBEG00000020569cpsf39479.118ENSOCUG00000003728CPSF39979.118Oryctolagus_cuniculus
ENSLBEG00000020569cpsf39683.382ENSORLG00000018854cpsf39983.382Oryzias_latipes
ENSLBEG00000020569cpsf39683.236ENSORLG00020013331cpsf39983.415Oryzias_latipes_hni
ENSLBEG00000020569cpsf39683.382ENSORLG00015011017cpsf39983.382Oryzias_latipes_hsok
ENSLBEG00000020569cpsf39683.942ENSOMEG00000010647cpsf39583.942Oryzias_melastigma
ENSLBEG00000020569cpsf39469.412ENSOGAG00000001680CPSF39969.412Otolemur_garnettii
ENSLBEG00000020569cpsf39479.295ENSOARG00000015073CPSF39979.295Ovis_aries
ENSLBEG00000020569cpsf39479.118ENSPPAG00000042457CPSF39191.631Pan_paniscus
ENSLBEG00000020569cpsf39478.792ENSPPRG00000016790CPSF39979.442Panthera_pardus
ENSLBEG00000020569cpsf39478.909ENSPTIG00000003920CPSF39979.676Panthera_tigris_altaica
ENSLBEG00000020569cpsf39479.118ENSPTRG00000011638CPSF39191.631Pan_troglodytes
ENSLBEG00000020569cpsf39479.559ENSPANG00000016798CPSF39488.981Papio_anubis
ENSLBEG00000020569cpsf39682.003ENSPKIG00000023646cpsf39982.003Paramormyrops_kingsleyae
ENSLBEG00000020569cpsf39477.827ENSPSIG00000016144CPSF39977.827Pelodiscus_sinensis
ENSLBEG00000020569cpsf38686.003ENSPMGG00000006141-9886.003Periophthalmus_magnuspinnatus
ENSLBEG00000020569cpsf35271.679ENSPMGG00000015311CPSF39971.679Periophthalmus_magnuspinnatus
ENSLBEG00000020569cpsf39478.645ENSPEMG00000017668Cpsf39979.736Peromyscus_maniculatus_bairdii
ENSLBEG00000020569cpsf37984.771ENSPMAG00000004841cpsf310084.771Petromyzon_marinus
ENSLBEG00000020569cpsf39278.797ENSPCIG00000009823CPSF39879.479Phascolarctos_cinereus
ENSLBEG00000020569cpsf39680.842ENSPFOG00000010418-9980.842Poecilia_formosa
ENSLBEG00000020569cpsf39683.895ENSPFOG00000015922cpsf39983.895Poecilia_formosa
ENSLBEG00000020569cpsf35270.050ENSPLAG00000021300-9970.050Poecilia_latipinna
ENSLBEG00000020569cpsf39683.895ENSPLAG00000000882cpsf39983.895Poecilia_latipinna
ENSLBEG00000020569cpsf39683.895ENSPMEG00000018309cpsf39983.895Poecilia_mexicana
ENSLBEG00000020569cpsf38681.553ENSPREG00000014875cpsf39975.700Poecilia_reticulata
ENSLBEG00000020569cpsf39677.695ENSPREG00000004482CPSF39977.695Poecilia_reticulata
ENSLBEG00000020569cpsf39474.963ENSPPYG00000012666CPSF39974.963Pongo_abelii
ENSLBEG00000020569cpsf37762.476ENSPCAG00000015042CPSF38162.476Procavia_capensis
ENSLBEG00000020569cpsf39463.231ENSPCOG00000023016CPSF39963.231Propithecus_coquereli
ENSLBEG00000020569cpsf39479.001ENSPVAG00000005324CPSF39979.001Pteropus_vampyrus
ENSLBEG00000020569cpsf39685.526ENSPNYG00000004405cpsf39985.526Pundamilia_nyererei
ENSLBEG00000020569cpsf37887.269ENSPNYG00000021047CPSF39087.269Pundamilia_nyererei
ENSLBEG00000020569cpsf39681.831ENSPNAG00000023060cpsf39981.831Pygocentrus_nattereri
ENSLBEG00000020569cpsf39479.265ENSRNOG00000052418Cpsf39979.265Rattus_norvegicus
ENSLBEG00000020569cpsf39474.374ENSRBIG00000041615CPSF39974.884Rhinopithecus_bieti
ENSLBEG00000020569cpsf39479.118ENSRROG00000033792CPSF39979.118Rhinopithecus_roxellana
ENSLBEG00000020569cpsf38440.212YLR277CYSH18540.212Saccharomyces_cerevisiae
ENSLBEG00000020569cpsf39275.635ENSSBOG00000027263CPSF39775.635Saimiri_boliviensis_boliviensis
ENSLBEG00000020569cpsf39479.148ENSSHAG00000007024CPSF39979.148Sarcophilus_harrisii
ENSLBEG00000020569cpsf39681.977ENSSFOG00015002108cpsf39981.977Scleropages_formosus
ENSLBEG00000020569cpsf38889.037ENSSMAG00000020534CPSF39089.037Scophthalmus_maximus
ENSLBEG00000020569cpsf39784.648ENSSDUG00000002828cpsf39984.648Seriola_dumerili
ENSLBEG00000020569cpsf39681.831ENSSDUG00000018498CPSF39981.831Seriola_dumerili
ENSLBEG00000020569cpsf39786.637ENSSLDG00000008469cpsf39986.637Seriola_lalandi_dorsalis
ENSLBEG00000020569cpsf39681.831ENSSLDG00000005234CPSF39981.831Seriola_lalandi_dorsalis
ENSLBEG00000020569cpsf37778.531ENSSARG00000005186CPSF37878.531Sorex_araneus
ENSLBEG00000020569cpsf39278.358ENSSPUG00000015525CPSF39778.358Sphenodon_punctatus
ENSLBEG00000020569cpsf39681.831ENSSPAG00000002906CPSF39981.831Stegastes_partitus
ENSLBEG00000020569cpsf39685.673ENSSPAG00000018579cpsf39985.673Stegastes_partitus
ENSLBEG00000020569cpsf39479.295ENSSSCG00000020799CPSF39979.295Sus_scrofa
ENSLBEG00000020569cpsf39479.676ENSTGUG00000013016CPSF39979.676Taeniopygia_guttata
ENSLBEG00000020569cpsf35264.304ENSTRUG00000013905CPSF39964.304Takifugu_rubripes
ENSLBEG00000020569cpsf39786.127ENSTRUG00000007030cpsf39986.127Takifugu_rubripes
ENSLBEG00000020569cpsf38187.603ENSTBEG00000002707CPSF38487.603Tupaia_belangeri
ENSLBEG00000020569cpsf38373.236ENSTTRG00000000861CPSF38773.236Tursiops_truncatus
ENSLBEG00000020569cpsf38686.824ENSUAMG00000007535CPSF38586.824Ursus_americanus
ENSLBEG00000020569cpsf38285.765ENSUMAG00000003676CPSF39585.765Ursus_maritimus
ENSLBEG00000020569cpsf38486.678ENSVPAG00000008041CPSF39186.678Vicugna_pacos
ENSLBEG00000020569cpsf39479.295ENSVVUG00000002194CPSF39979.295Vulpes_vulpes
ENSLBEG00000020569cpsf39678.406ENSXETG00000008263cpsf39978.406Xenopus_tropicalis
ENSLBEG00000020569cpsf39684.141ENSXCOG00000019695cpsf39984.141Xiphophorus_couchianus
ENSLBEG00000020569cpsf39681.541ENSXMAG00000027291CPSF39981.541Xiphophorus_maculatus
ENSLBEG00000020569cpsf39683.918ENSXMAG00000009784cpsf39983.918Xiphophorus_maculatus

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