EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020611 (Gene tree)
Gene ID: 109986342
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3095 bases
Position: chrFKLU01000095.1:526968-530062
Accession: 109986342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027172	PRP4	PF08799.11	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028473	-	1577	XM_020636962	ENSLBEP00000027172	508 (aa)	XP_020492618	UPI0009B3901F

Gene Model

Click here to download ENSLBEG00000020611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020611	prpf4	58	31.250	ENSLBEG00000016119	POC1A	69	31.250
ENSLBEG00000020611	prpf4	58	31.174	ENSLBEG00000026742	tbl3	68	31.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020611	prpf4	99	75.697	ENSG00000136875	PRPF4	96	75.697	Homo_sapiens
ENSLBEG00000020611	prpf4	99	93.996	ENSAPOG00000014132	prpf4	99	93.996	Acanthochromis_polyacanthus
ENSLBEG00000020611	prpf4	99	75.896	ENSAMEG00000013048	PRPF4	94	75.896	Ailuropoda_melanoleuca
ENSLBEG00000020611	prpf4	100	94.314	ENSACIG00000005579	prpf4	100	94.314	Amphilophus_citrinellus
ENSLBEG00000020611	prpf4	100	93.922	ENSAOCG00000005457	prpf4	100	93.922	Amphiprion_ocellaris
ENSLBEG00000020611	prpf4	100	93.725	ENSAPEG00000000776	prpf4	100	93.725	Amphiprion_percula
ENSLBEG00000020611	prpf4	100	94.118	ENSATEG00000023013	prpf4	100	94.118	Anabas_testudineus
ENSLBEG00000020611	prpf4	99	76.634	ENSAPLG00000006534	PRPF4	94	76.634	Anas_platyrhynchos
ENSLBEG00000020611	prpf4	99	75.246	ENSACAG00000015110	PRPF4	97	75.246	Anolis_carolinensis
ENSLBEG00000020611	prpf4	99	75.896	ENSANAG00000022464	PRPF4	93	75.896	Aotus_nancymaae
ENSLBEG00000020611	prpf4	100	93.725	ENSACLG00000019031	prpf4	100	93.725	Astatotilapia_calliptera
ENSLBEG00000020611	prpf4	100	61.069	ENSAMXG00000006756	prpf4	100	73.425	Astyanax_mexicanus
ENSLBEG00000020611	prpf4	99	75.896	ENSBTAG00000004571	PRPF4	96	75.896	Bos_taurus
ENSLBEG00000020611	prpf4	93	43.671	WBGene00007972	prp-4	95	43.671	Caenorhabditis_elegans
ENSLBEG00000020611	prpf4	99	75.896	ENSCJAG00000017856	PRPF4	96	75.896	Callithrix_jacchus
ENSLBEG00000020611	prpf4	99	75.896	ENSCAFG00000003224	PRPF4	93	75.896	Canis_familiaris
ENSLBEG00000020611	prpf4	99	75.896	ENSCAFG00020022637	PRPF4	97	75.896	Canis_lupus_dingo
ENSLBEG00000020611	prpf4	99	75.896	ENSCHIG00000024648	-	96	75.896	Capra_hircus
ENSLBEG00000020611	prpf4	99	76.096	ENSTSYG00000010366	PRPF4	96	76.096	Carlito_syrichta
ENSLBEG00000020611	prpf4	89	69.343	ENSCAPG00000008935	PRPF4	97	68.258	Cavia_aperea
ENSLBEG00000020611	prpf4	99	70.717	ENSCPOG00000014729	-	96	70.717	Cavia_porcellus
ENSLBEG00000020611	prpf4	99	75.498	ENSCPOG00000010747	-	96	75.498	Cavia_porcellus
ENSLBEG00000020611	prpf4	99	75.697	ENSCCAG00000028990	PRPF4	96	75.697	Cebus_capucinus
ENSLBEG00000020611	prpf4	99	75.896	ENSCATG00000021552	PRPF4	96	75.896	Cercocebus_atys
ENSLBEG00000020611	prpf4	99	75.896	ENSCLAG00000013448	PRPF4	96	75.896	Chinchilla_lanigera
ENSLBEG00000020611	prpf4	89	75.221	ENSCHOG00000007233	PRPF4	100	75.221	Choloepus_hoffmanni
ENSLBEG00000020611	prpf4	100	75.591	ENSCPBG00000019136	PRPF4	73	75.591	Chrysemys_picta_bellii
ENSLBEG00000020611	prpf4	97	60.362	ENSCING00000001299	-	95	60.362	Ciona_intestinalis
ENSLBEG00000020611	prpf4	99	58.185	ENSCSAVG00000009178	-	99	59.355	Ciona_savignyi
ENSLBEG00000020611	prpf4	99	75.896	ENSCANG00000003246	PRPF4	96	75.896	Colobus_angolensis_palliatus
ENSLBEG00000020611	prpf4	99	75.697	ENSCGRG00001016992	Prpf4	96	75.697	Cricetulus_griseus_chok1gshd
ENSLBEG00000020611	prpf4	99	75.697	ENSCGRG00000017560	Prpf4	96	75.697	Cricetulus_griseus_crigri
ENSLBEG00000020611	prpf4	100	88.780	ENSCSEG00000020451	prpf4	100	88.780	Cynoglossus_semilaevis
ENSLBEG00000020611	prpf4	100	80.512	ENSDARG00000067639	prpf4	100	80.512	Danio_rerio
ENSLBEG00000020611	prpf4	99	75.697	ENSDNOG00000013203	PRPF4	96	75.697	Dasypus_novemcinctus
ENSLBEG00000020611	prpf4	99	76.295	ENSDORG00000026275	Prpf4	96	76.295	Dipodomys_ordii
ENSLBEG00000020611	prpf4	99	49.546	FBgn0036733	U4-U6-60K	99	49.002	Drosophila_melanogaster
ENSLBEG00000020611	prpf4	99	76.494	ENSETEG00000020389	PRPF4	96	76.494	Echinops_telfairi
ENSLBEG00000020611	prpf4	99	68.172	ENSEBUG00000015229	prpf4	88	68.849	Eptatretus_burgeri
ENSLBEG00000020611	prpf4	99	75.896	ENSEASG00005022678	PRPF4	96	75.896	Equus_asinus_asinus
ENSLBEG00000020611	prpf4	99	75.896	ENSECAG00000007072	PRPF4	96	75.896	Equus_caballus
ENSLBEG00000020611	prpf4	84	81.590	ENSEEUG00000007480	PRPF4	96	60.959	Erinaceus_europaeus
ENSLBEG00000020611	prpf4	100	81.102	ENSELUG00000007510	prpf4	100	81.102	Esox_lucius
ENSLBEG00000020611	prpf4	99	75.896	ENSFCAG00000005514	PRPF4	96	75.896	Felis_catus
ENSLBEG00000020611	prpf4	99	75.964	ENSFALG00000005423	PRPF4	85	75.964	Ficedula_albicollis
ENSLBEG00000020611	prpf4	99	75.896	ENSFDAG00000005839	PRPF4	96	75.896	Fukomys_damarensis
ENSLBEG00000020611	prpf4	100	91.569	ENSFHEG00000001300	prpf4	100	91.569	Fundulus_heteroclitus
ENSLBEG00000020611	prpf4	99	76.436	ENSGALG00000008857	PRPF4	94	76.436	Gallus_gallus
ENSLBEG00000020611	prpf4	94	88.450	ENSGAFG00000012164	prpf4	68	88.450	Gambusia_affinis
ENSLBEG00000020611	prpf4	100	83.333	ENSGACG00000015476	prpf4	100	83.137	Gasterosteus_aculeatus
ENSLBEG00000020611	prpf4	100	75.197	ENSGAGG00000025029	PRPF4	94	75.446	Gopherus_agassizii
ENSLBEG00000020611	prpf4	99	75.697	ENSGGOG00000006943	PRPF4	96	75.697	Gorilla_gorilla
ENSLBEG00000020611	prpf4	100	93.529	ENSHBUG00000000562	prpf4	100	93.529	Haplochromis_burtoni
ENSLBEG00000020611	prpf4	99	75.697	ENSHGLG00000015191	PRPF4	96	75.697	Heterocephalus_glaber_female
ENSLBEG00000020611	prpf4	99	60.956	ENSHGLG00000003838	-	96	60.159	Heterocephalus_glaber_female
ENSLBEG00000020611	prpf4	95	65.503	ENSHGLG00000016628	-	95	65.914	Heterocephalus_glaber_female
ENSLBEG00000020611	prpf4	99	60.956	ENSHGLG00100005571	-	96	60.159	Heterocephalus_glaber_male
ENSLBEG00000020611	prpf4	100	78.543	ENSIPUG00000017956	PRPF4	100	78.543	Ictalurus_punctatus
ENSLBEG00000020611	prpf4	99	75.896	ENSSTOG00000027833	PRPF4	96	75.896	Ictidomys_tridecemlineatus
ENSLBEG00000020611	prpf4	99	75.896	ENSJJAG00000008838	Prpf4	96	75.896	Jaculus_jaculus
ENSLBEG00000020611	prpf4	100	91.569	ENSKMAG00000013236	prpf4	100	91.569	Kryptolebias_marmoratus
ENSLBEG00000020611	prpf4	100	70.980	ENSLACG00000016317	PRPF4	97	70.980	Latimeria_chalumnae
ENSLBEG00000020611	prpf4	100	80.906	ENSLOCG00000000581	prpf4	100	80.906	Lepisosteus_oculatus
ENSLBEG00000020611	prpf4	99	75.896	ENSLAFG00000018225	PRPF4	96	75.896	Loxodonta_africana
ENSLBEG00000020611	prpf4	99	75.697	ENSMFAG00000039397	PRPF4	96	75.697	Macaca_fascicularis
ENSLBEG00000020611	prpf4	99	75.896	ENSMMUG00000005844	PRPF4	96	75.896	Macaca_mulatta
ENSLBEG00000020611	prpf4	99	66.733	ENSMNEG00000033737	PRPF4	96	66.733	Macaca_nemestrina
ENSLBEG00000020611	prpf4	99	75.896	ENSMLEG00000040284	PRPF4	96	75.896	Mandrillus_leucophaeus
ENSLBEG00000020611	prpf4	100	93.529	ENSMAMG00000020141	prpf4	100	93.529	Mastacembelus_armatus
ENSLBEG00000020611	prpf4	100	93.725	ENSMZEG00005023205	prpf4	100	93.725	Maylandia_zebra
ENSLBEG00000020611	prpf4	99	75.842	ENSMGAG00000001796	PRPF4	94	75.842	Meleagris_gallopavo
ENSLBEG00000020611	prpf4	99	75.697	ENSMAUG00000018022	Prpf4	96	75.697	Mesocricetus_auratus
ENSLBEG00000020611	prpf4	99	75.345	ENSMICG00000015022	PRPF4	97	75.345	Microcebus_murinus
ENSLBEG00000020611	prpf4	99	75.697	ENSMOCG00000018273	Prpf4	96	75.697	Microtus_ochrogaster
ENSLBEG00000020611	prpf4	100	92.126	ENSMMOG00000021177	prpf4	100	92.126	Mola_mola
ENSLBEG00000020611	prpf4	99	75.148	ENSMODG00000004444	-	97	75.446	Monodelphis_domestica
ENSLBEG00000020611	prpf4	99	74.556	ENSMODG00000025096	-	94	74.851	Monodelphis_domestica
ENSLBEG00000020611	prpf4	100	95.098	ENSMALG00000013624	prpf4	100	95.098	Monopterus_albus
ENSLBEG00000020611	prpf4	99	75.697	MGP_CAROLIEiJ_G0026078	Prpf4	96	75.697	Mus_caroli
ENSLBEG00000020611	prpf4	99	75.697	ENSMUSG00000066148	Prpf4	96	75.697	Mus_musculus
ENSLBEG00000020611	prpf4	99	75.896	MGP_PahariEiJ_G0028413	Prpf4	96	75.896	Mus_pahari
ENSLBEG00000020611	prpf4	99	75.697	MGP_SPRETEiJ_G0027042	Prpf4	96	75.697	Mus_spretus
ENSLBEG00000020611	prpf4	99	75.896	ENSMPUG00000007883	PRPF4	96	75.896	Mustela_putorius_furo
ENSLBEG00000020611	prpf4	99	75.896	ENSMLUG00000015309	-	93	75.896	Myotis_lucifugus
ENSLBEG00000020611	prpf4	99	74.502	ENSMLUG00000008626	-	94	74.502	Myotis_lucifugus
ENSLBEG00000020611	prpf4	99	70.916	ENSNGAG00000000468	Prpf4	96	70.916	Nannospalax_galili
ENSLBEG00000020611	prpf4	100	93.922	ENSNBRG00000007972	prpf4	100	93.922	Neolamprologus_brichardi
ENSLBEG00000020611	prpf4	99	75.896	ENSNLEG00000016647	PRPF4	96	75.896	Nomascus_leucogenys
ENSLBEG00000020611	prpf4	99	74.753	ENSMEUG00000013256	PRPF4	98	75.050	Notamacropus_eugenii
ENSLBEG00000020611	prpf4	99	76.295	ENSOPRG00000005302	PRPF4	96	76.295	Ochotona_princeps
ENSLBEG00000020611	prpf4	99	75.896	ENSODEG00000018147	PRPF4	96	75.896	Octodon_degus
ENSLBEG00000020611	prpf4	100	93.529	ENSONIG00000012671	prpf4	100	93.529	Oreochromis_niloticus
ENSLBEG00000020611	prpf4	99	76.096	ENSOCUG00000005046	PRPF4	96	76.096	Oryctolagus_cuniculus
ENSLBEG00000020611	prpf4	100	90.551	ENSORLG00000019641	prpf4	100	90.551	Oryzias_latipes
ENSLBEG00000020611	prpf4	100	90.551	ENSORLG00020019438	prpf4	100	90.551	Oryzias_latipes_hni
ENSLBEG00000020611	prpf4	100	88.976	ENSOMEG00000020941	prpf4	100	89.397	Oryzias_melastigma
ENSLBEG00000020611	prpf4	99	71.713	ENSOGAG00000007802	PRPF4	94	71.713	Otolemur_garnettii
ENSLBEG00000020611	prpf4	99	75.896	ENSOARG00000006319	PRPF4	93	75.896	Ovis_aries
ENSLBEG00000020611	prpf4	99	75.697	ENSPPAG00000041797	PRPF4	96	75.697	Pan_paniscus
ENSLBEG00000020611	prpf4	99	75.896	ENSPPRG00000014360	PRPF4	96	75.896	Panthera_pardus
ENSLBEG00000020611	prpf4	99	75.896	ENSPTIG00000009574	PRPF4	96	75.896	Panthera_tigris_altaica
ENSLBEG00000020611	prpf4	99	75.697	ENSPTRG00000021274	PRPF4	96	75.697	Pan_troglodytes
ENSLBEG00000020611	prpf4	99	76.096	ENSPANG00000025776	PRPF4	92	76.096	Papio_anubis
ENSLBEG00000020611	prpf4	100	80.709	ENSPKIG00000017259	prpf4	100	80.709	Paramormyrops_kingsleyae
ENSLBEG00000020611	prpf4	99	75.644	ENSPSIG00000010713	PRPF4	89	75.644	Pelodiscus_sinensis
ENSLBEG00000020611	prpf4	100	64.498	ENSPMGG00000000997	prpf4	98	64.312	Periophthalmus_magnuspinnatus
ENSLBEG00000020611	prpf4	99	75.697	ENSPEMG00000024115	Prpf4	96	75.697	Peromyscus_maniculatus_bairdii
ENSLBEG00000020611	prpf4	99	74.951	ENSPCIG00000003821	PRPF4	98	75.248	Phascolarctos_cinereus
ENSLBEG00000020611	prpf4	100	84.047	ENSPFOG00000013524	prpf4	99	88.146	Poecilia_formosa
ENSLBEG00000020611	prpf4	84	87.077	ENSPLAG00000011620	prpf4	97	86.997	Poecilia_latipinna
ENSLBEG00000020611	prpf4	98	88.201	ENSPMEG00000006813	prpf4	100	88.201	Poecilia_mexicana
ENSLBEG00000020611	prpf4	99	75.697	ENSPCAG00000002561	PRPF4	98	75.697	Procavia_capensis
ENSLBEG00000020611	prpf4	99	75.697	ENSPCOG00000011975	PRPF4	96	75.697	Propithecus_coquereli
ENSLBEG00000020611	prpf4	99	72.709	ENSPVAG00000004708	PRPF4	96	72.709	Pteropus_vampyrus
ENSLBEG00000020611	prpf4	100	93.725	ENSPNYG00000008013	prpf4	100	93.725	Pundamilia_nyererei
ENSLBEG00000020611	prpf4	100	79.331	ENSPNAG00000000697	prpf4	100	79.331	Pygocentrus_nattereri
ENSLBEG00000020611	prpf4	99	75.697	ENSRNOG00000014777	Prpf4	96	75.697	Rattus_norvegicus
ENSLBEG00000020611	prpf4	99	75.896	ENSRBIG00000040221	PRPF4	96	75.896	Rhinopithecus_bieti
ENSLBEG00000020611	prpf4	99	75.896	ENSRROG00000040240	PRPF4	96	75.896	Rhinopithecus_roxellana
ENSLBEG00000020611	prpf4	99	74.951	ENSSHAG00000017658	PRPF4	97	75.248	Sarcophilus_harrisii
ENSLBEG00000020611	prpf4	100	80.709	ENSSFOG00015008963	prpf4	100	80.709	Scleropages_formosus
ENSLBEG00000020611	prpf4	100	92.745	ENSSMAG00000008889	prpf4	100	92.745	Scophthalmus_maximus
ENSLBEG00000020611	prpf4	99	95.445	ENSSDUG00000022083	prpf4	94	95.445	Seriola_dumerili
ENSLBEG00000020611	prpf4	99	95.652	ENSSLDG00000008115	prpf4	94	95.652	Seriola_lalandi_dorsalis
ENSLBEG00000020611	prpf4	99	75.740	ENSSPUG00000015582	PRPF4	97	75.740	Sphenodon_punctatus
ENSLBEG00000020611	prpf4	100	87.524	ENSSPAG00000011286	prpf4	100	87.524	Stegastes_partitus
ENSLBEG00000020611	prpf4	99	75.896	ENSSSCG00000024648	PRPF4	96	75.896	Sus_scrofa
ENSLBEG00000020611	prpf4	97	77.282	ENSTGUG00000002623	PRPF4	100	77.505	Taeniopygia_guttata
ENSLBEG00000020611	prpf4	100	89.587	ENSTRUG00000008853	prpf4	100	89.587	Takifugu_rubripes
ENSLBEG00000020611	prpf4	100	89.764	ENSTNIG00000013250	prpf4	100	89.764	Tetraodon_nigroviridis
ENSLBEG00000020611	prpf4	99	68.725	ENSTBEG00000000821	PRPF4	96	68.725	Tupaia_belangeri
ENSLBEG00000020611	prpf4	82	77.517	ENSTTRG00000003246	PRPF4	85	77.517	Tursiops_truncatus
ENSLBEG00000020611	prpf4	62	71.429	ENSUAMG00000018288	PRPF4	88	72.638	Ursus_americanus
ENSLBEG00000020611	prpf4	99	75.299	ENSUMAG00000019375	PRPF4	96	75.299	Ursus_maritimus
ENSLBEG00000020611	prpf4	99	75.498	ENSVPAG00000005281	PRPF4	96	75.498	Vicugna_pacos
ENSLBEG00000020611	prpf4	99	75.248	ENSVVUG00000002476	PRPF4	99	75.248	Vulpes_vulpes
ENSLBEG00000020611	prpf4	71	64.903	ENSXCOG00000006101	prpf4	93	67.574	Xiphophorus_couchianus
ENSLBEG00000020611	prpf4	91	75.484	ENSXMAG00000002750	prpf4	100	77.255	Xiphophorus_maculatus