EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020655 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 17848 bases
Position: chrFKLU01000288.1:423893-441740
Accession: 109994357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027298	ResIII	PF04851.15	1.8e-06	1	1
ENSLBEP00000027298	BRK	PF07533.16	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028603	-	4278	XM_020647662	ENSLBEP00000027298	1425 (aa)	XP_020503318	-

Gene Model

Click here to download ENSLBEG00000020655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020655's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020655	-	95	72.302	ENSLBEG00000017383	smarca4a	97	73.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020655	-	81	83.151	ENSG00000127616	SMARCA4	94	89.495	Homo_sapiens
ENSLBEG00000020655	-	94	92.160	ENSAPOG00000004542	SMARCA4	96	93.902	Acanthochromis_polyacanthus
ENSLBEG00000020655	-	76	82.163	ENSAPOG00000003509	smarca4a	93	81.939	Acanthochromis_polyacanthus
ENSLBEG00000020655	-	81	72.542	ENSAMEG00000010868	SMARCA4	95	74.290	Ailuropoda_melanoleuca
ENSLBEG00000020655	-	94	84.337	ENSACIG00000003035	-	96	84.214	Amphilophus_citrinellus
ENSLBEG00000020655	-	98	82.243	ENSACIG00000021550	smarca4a	99	72.412	Amphilophus_citrinellus
ENSLBEG00000020655	-	94	81.044	ENSAOCG00000009450	-	76	93.509	Amphiprion_ocellaris
ENSLBEG00000020655	-	89	90.814	ENSAOCG00000019167	smarca4a	100	77.945	Amphiprion_ocellaris
ENSLBEG00000020655	-	89	91.023	ENSAPEG00000015559	smarca4a	100	78.017	Amphiprion_percula
ENSLBEG00000020655	-	99	86.846	ENSAPEG00000023108	-	96	86.996	Amphiprion_percula
ENSLBEG00000020655	-	98	84.751	ENSATEG00000011524	smarca4a	94	84.591	Anabas_testudineus
ENSLBEG00000020655	-	94	97.048	ENSATEG00000001094	-	91	97.048	Anabas_testudineus
ENSLBEG00000020655	-	81	76.677	ENSANAG00000036991	SMARCA4	95	83.048	Aotus_nancymaae
ENSLBEG00000020655	-	98	74.621	ENSACLG00000000163	smarca4a	98	73.889	Astatotilapia_calliptera
ENSLBEG00000020655	-	94	84.189	ENSACLG00000008638	-	97	83.571	Astatotilapia_calliptera
ENSLBEG00000020655	-	96	73.537	ENSAMXG00000021023	smarca4a	99	74.038	Astyanax_mexicanus
ENSLBEG00000020655	-	94	77.303	ENSAMXG00000011238	-	96	91.020	Astyanax_mexicanus
ENSLBEG00000020655	-	81	76.947	ENSBTAG00000019220	SMARCA4	78	83.307	Bos_taurus
ENSLBEG00000020655	-	81	73.236	ENSCJAG00000005936	SMARCA4	90	82.362	Callithrix_jacchus
ENSLBEG00000020655	-	81	82.995	ENSCAFG00000017584	SMARCA4	95	83.307	Canis_familiaris
ENSLBEG00000020655	-	98	83.651	ENSCAFG00020024620	SMARCA4	92	89.104	Canis_lupus_dingo
ENSLBEG00000020655	-	81	73.930	ENSCHIG00000015318	SMARCA4	99	71.483	Capra_hircus
ENSLBEG00000020655	-	98	83.151	ENSTSYG00000012966	SMARCA4	95	83.307	Carlito_syrichta
ENSLBEG00000020655	-	94	75.500	ENSCAPG00000015932	SMARCA4	95	91.606	Cavia_aperea
ENSLBEG00000020655	-	81	82.839	ENSCPOG00000015549	SMARCA4	77	82.995	Cavia_porcellus
ENSLBEG00000020655	-	81	74.675	ENSCCAG00000031660	SMARCA4	95	82.362	Cebus_capucinus
ENSLBEG00000020655	-	81	83.151	ENSCATG00000029530	SMARCA4	95	83.048	Cercocebus_atys
ENSLBEG00000020655	-	98	82.995	ENSCLAG00000011946	SMARCA4	95	83.307	Chinchilla_lanigera
ENSLBEG00000020655	-	82	76.923	ENSCPBG00000009994	SMARCA4	95	83.048	Chrysemys_picta_bellii
ENSLBEG00000020655	-	81	82.995	ENSCANG00000036013	SMARCA4	95	83.048	Colobus_angolensis_palliatus
ENSLBEG00000020655	-	81	82.683	ENSCGRG00001016732	Smarca4	95	83.463	Cricetulus_griseus_chok1gshd
ENSLBEG00000020655	-	81	82.683	ENSCGRG00000017242	Smarca4	95	83.463	Cricetulus_griseus_crigri
ENSLBEG00000020655	-	94	71.365	ENSCSEG00000014771	smarca4a	99	71.110	Cynoglossus_semilaevis
ENSLBEG00000020655	-	98	71.667	ENSCVAG00000006979	smarca4a	99	72.461	Cyprinodon_variegatus
ENSLBEG00000020655	-	98	89.968	ENSCVAG00000003018	-	77	90.615	Cyprinodon_variegatus
ENSLBEG00000020655	-	90	89.698	ENSDARG00000104339	SMARCA4	91	88.502	Danio_rerio
ENSLBEG00000020655	-	99	81.241	ENSDARG00000077226	smarca4a	95	82.636	Danio_rerio
ENSLBEG00000020655	-	56	88.696	ENSDNOG00000048847	SMARCA4	82	88.696	Dasypus_novemcinctus
ENSLBEG00000020655	-	69	74.795	ENSDORG00000002544	Smarca4	89	66.955	Dipodomys_ordii
ENSLBEG00000020655	-	78	65.717	ENSETEG00000013361	SMARCA4	94	63.165	Echinops_telfairi
ENSLBEG00000020655	-	98	85.120	ENSEASG00005006167	SMARCA4	94	87.049	Equus_asinus_asinus
ENSLBEG00000020655	-	81	83.151	ENSECAG00000008334	SMARCA4	78	83.151	Equus_caballus
ENSLBEG00000020655	-	98	74.856	ENSELUG00000010247	smarca4a	98	73.776	Esox_lucius
ENSLBEG00000020655	-	98	83.568	ENSELUG00000023232	-	94	83.856	Esox_lucius
ENSLBEG00000020655	-	81	76.542	ENSFCAG00000004894	SMARCA4	95	83.048	Felis_catus
ENSLBEG00000020655	-	75	88.153	ENSFALG00000004208	SMARCA4	91	88.153	Ficedula_albicollis
ENSLBEG00000020655	-	75	78.028	ENSFDAG00000012237	SMARCA4	94	90.152	Fukomys_damarensis
ENSLBEG00000020655	-	94	81.327	ENSFHEG00000010182	smarca4a	99	81.335	Fundulus_heteroclitus
ENSLBEG00000020655	-	98	87.092	ENSFHEG00000007902	-	84	86.395	Fundulus_heteroclitus
ENSLBEG00000020655	-	82	92.670	ENSGMOG00000002649	smarca4a	80	92.670	Gadus_morhua
ENSLBEG00000020655	-	83	83.333	ENSGMOG00000005756	-	83	83.333	Gadus_morhua
ENSLBEG00000020655	-	56	76.957	ENSGALG00000047145	SMARCA4	100	70.847	Gallus_gallus
ENSLBEG00000020655	-	99	85.097	ENSGAFG00000008827	-	96	85.097	Gambusia_affinis
ENSLBEG00000020655	-	86	82.243	ENSGAFG00000014900	smarca4a	92	82.243	Gambusia_affinis
ENSLBEG00000020655	-	98	74.557	ENSGACG00000016033	-	95	83.084	Gasterosteus_aculeatus
ENSLBEG00000020655	-	94	72.077	ENSGACG00000006691	smarca4a	95	81.960	Gasterosteus_aculeatus
ENSLBEG00000020655	-	82	77.176	ENSGAGG00000016757	SMARCA4	95	83.438	Gopherus_agassizii
ENSLBEG00000020655	-	81	83.151	ENSGGOG00000009882	SMARCA4	95	83.048	Gorilla_gorilla
ENSLBEG00000020655	-	94	85.147	ENSHBUG00000005447	-	97	84.386	Haplochromis_burtoni
ENSLBEG00000020655	-	98	81.818	ENSHBUG00000021172	smarca4a	99	81.970	Haplochromis_burtoni
ENSLBEG00000020655	-	81	76.618	ENSHGLG00000010519	SMARCA4	77	82.919	Heterocephalus_glaber_female
ENSLBEG00000020655	-	98	84.921	ENSHGLG00100013774	SMARCA4	95	84.762	Heterocephalus_glaber_male
ENSLBEG00000020655	-	95	74.103	ENSHCOG00000009510	smarca4a	96	74.515	Hippocampus_comes
ENSLBEG00000020655	-	99	81.667	ENSIPUG00000006107	smarca4a	93	91.234	Ictalurus_punctatus
ENSLBEG00000020655	-	95	75.032	ENSIPUG00000016346	-	95	84.087	Ictalurus_punctatus
ENSLBEG00000020655	-	81	76.794	ENSSTOG00000007939	SMARCA4	77	83.307	Ictidomys_tridecemlineatus
ENSLBEG00000020655	-	81	74.684	ENSJJAG00000012877	Smarca4	95	78.042	Jaculus_jaculus
ENSLBEG00000020655	-	94	80.345	ENSKMAG00000019518	-	93	91.986	Kryptolebias_marmoratus
ENSLBEG00000020655	-	98	81.776	ENSKMAG00000011931	smarca4a	98	74.093	Kryptolebias_marmoratus
ENSLBEG00000020655	-	98	82.893	ENSLOCG00000007820	smarca4a	95	83.075	Lepisosteus_oculatus
ENSLBEG00000020655	-	98	74.072	ENSLAFG00000001433	SMARCA4	95	83.463	Loxodonta_africana
ENSLBEG00000020655	-	81	76.947	ENSMFAG00000032146	SMARCA4	95	83.048	Macaca_fascicularis
ENSLBEG00000020655	-	81	83.151	ENSMMUG00000012042	SMARCA4	91	89.189	Macaca_mulatta
ENSLBEG00000020655	-	81	83.151	ENSMNEG00000028512	SMARCA4	95	83.307	Macaca_nemestrina
ENSLBEG00000020655	-	81	76.947	ENSMLEG00000034976	SMARCA4	95	83.048	Mandrillus_leucophaeus
ENSLBEG00000020655	-	94	93.428	ENSMAMG00000002841	-	94	92.334	Mastacembelus_armatus
ENSLBEG00000020655	-	98	81.493	ENSMAMG00000009256	smarca4a	95	81.337	Mastacembelus_armatus
ENSLBEG00000020655	-	98	81.818	ENSMZEG00005003889	smarca4a	99	81.970	Maylandia_zebra
ENSLBEG00000020655	-	96	79.610	ENSMZEG00005023861	-	96	80.563	Maylandia_zebra
ENSLBEG00000020655	-	82	78.971	ENSMAUG00000020731	Smarca4	77	83.075	Mesocricetus_auratus
ENSLBEG00000020655	-	98	70.345	ENSMICG00000009806	SMARCA4	95	83.204	Microcebus_murinus
ENSLBEG00000020655	-	81	82.609	ENSMOCG00000022209	Smarca4	95	82.764	Microtus_ochrogaster
ENSLBEG00000020655	-	98	87.809	ENSMMOG00000008466	-	95	87.558	Mola_mola
ENSLBEG00000020655	-	95	83.333	ENSMMOG00000007571	smarca4a	98	72.456	Mola_mola
ENSLBEG00000020655	-	81	74.925	ENSMODG00000006287	SMARCA4	95	78.125	Monodelphis_domestica
ENSLBEG00000020655	-	94	82.115	ENSMALG00000003388	smarca4a	99	81.818	Monopterus_albus
ENSLBEG00000020655	-	89	92.480	ENSMALG00000021534	-	96	92.683	Monopterus_albus
ENSLBEG00000020655	-	81	82.995	MGP_CAROLIEiJ_G0031879	Smarca4	88	82.157	Mus_caroli
ENSLBEG00000020655	-	81	82.995	ENSMUSG00000032187	Smarca4	88	82.157	Mus_musculus
ENSLBEG00000020655	-	81	82.995	MGP_PahariEiJ_G0014745	Smarca4	95	83.151	Mus_pahari
ENSLBEG00000020655	-	81	82.995	MGP_SPRETEiJ_G0033003	Smarca4	88	82.157	Mus_spretus
ENSLBEG00000020655	-	81	82.995	ENSMPUG00000005711	SMARCA4	95	83.151	Mustela_putorius_furo
ENSLBEG00000020655	-	81	82.995	ENSMLUG00000004491	-	77	83.151	Myotis_lucifugus
ENSLBEG00000020655	-	82	82.995	ENSNGAG00000021852	Smarca4	95	83.151	Nannospalax_galili
ENSLBEG00000020655	-	95	89.204	ENSNBRG00000011457	smarca4a	92	89.381	Neolamprologus_brichardi
ENSLBEG00000020655	-	89	84.676	ENSNBRG00000018865	-	99	84.388	Neolamprologus_brichardi
ENSLBEG00000020655	-	79	76.190	ENSNLEG00000012389	SMARCA4	92	81.109	Nomascus_leucogenys
ENSLBEG00000020655	-	77	96.552	ENSOPRG00000000885	-	71	96.552	Ochotona_princeps
ENSLBEG00000020655	-	98	74.574	ENSODEG00000017127	SMARCA4	95	80.858	Octodon_degus
ENSLBEG00000020655	-	98	77.628	ENSONIG00000018040	-	99	76.222	Oreochromis_niloticus
ENSLBEG00000020655	-	98	82.582	ENSONIG00000008196	smarca4a	99	81.667	Oreochromis_niloticus
ENSLBEG00000020655	-	97	69.936	ENSOCUG00000001787	SMARCA4	95	81.250	Oryctolagus_cuniculus
ENSLBEG00000020655	-	94	81.944	ENSORLG00000015452	smarca4a	99	81.791	Oryzias_latipes
ENSLBEG00000020655	-	94	87.714	ENSORLG00000003955	-	94	93.293	Oryzias_latipes
ENSLBEG00000020655	-	94	81.464	ENSORLG00020004611	smarca4a	99	81.791	Oryzias_latipes_hni
ENSLBEG00000020655	-	94	87.714	ENSORLG00020009728	-	94	93.293	Oryzias_latipes_hni
ENSLBEG00000020655	-	94	81.464	ENSORLG00015016560	smarca4a	99	81.791	Oryzias_latipes_hsok
ENSLBEG00000020655	-	99	85.952	ENSORLG00015007739	-	95	87.558	Oryzias_latipes_hsok
ENSLBEG00000020655	-	88	88.025	ENSOMEG00000016626	-	95	87.869	Oryzias_melastigma
ENSLBEG00000020655	-	98	81.308	ENSOMEG00000007486	smarca4a	99	81.639	Oryzias_melastigma
ENSLBEG00000020655	-	73	77.135	ENSOGAG00000016148	SMARCA4	100	71.271	Otolemur_garnettii
ENSLBEG00000020655	-	81	76.489	ENSOARG00000017454	SMARCA4	78	82.344	Ovis_aries
ENSLBEG00000020655	-	81	83.151	ENSPPAG00000043191	SMARCA4	95	83.048	Pan_paniscus
ENSLBEG00000020655	-	81	76.542	ENSPPRG00000000064	SMARCA4	95	83.204	Panthera_pardus
ENSLBEG00000020655	-	79	74.496	ENSPTIG00000017447	SMARCA4	76	82.770	Panthera_tigris_altaica
ENSLBEG00000020655	-	81	83.151	ENSPTRG00000010488	SMARCA4	95	83.048	Pan_troglodytes
ENSLBEG00000020655	-	81	76.947	ENSPANG00000011042	SMARCA4	95	83.048	Papio_anubis
ENSLBEG00000020655	-	94	83.642	ENSPKIG00000010087	-	95	83.568	Paramormyrops_kingsleyae
ENSLBEG00000020655	-	98	85.578	ENSPKIG00000007770	SMARCA4	94	85.759	Paramormyrops_kingsleyae
ENSLBEG00000020655	-	98	76.296	ENSPSIG00000005547	SMARCA4	95	76.593	Pelodiscus_sinensis
ENSLBEG00000020655	-	81	82.609	ENSPEMG00000020389	Smarca4	95	82.764	Peromyscus_maniculatus_bairdii
ENSLBEG00000020655	-	81	76.758	ENSPCIG00000017138	SMARCA4	95	83.438	Phascolarctos_cinereus
ENSLBEG00000020655	-	98	69.486	ENSPFOG00000007892	smarca4a	99	71.825	Poecilia_formosa
ENSLBEG00000020655	-	82	85.868	ENSPFOG00000012930	-	84	86.395	Poecilia_formosa
ENSLBEG00000020655	-	98	81.804	ENSPLAG00000014294	smarca4a	95	82.143	Poecilia_latipinna
ENSLBEG00000020655	-	84	85.991	ENSPLAG00000018616	-	96	86.438	Poecilia_latipinna
ENSLBEG00000020655	-	99	85.842	ENSPMEG00000008929	-	96	85.842	Poecilia_mexicana
ENSLBEG00000020655	-	82	78.538	ENSPMEG00000003725	smarca4a	99	72.033	Poecilia_mexicana
ENSLBEG00000020655	-	98	81.931	ENSPREG00000014608	smarca4a	95	81.931	Poecilia_reticulata
ENSLBEG00000020655	-	94	92.119	ENSPREG00000014823	-	96	86.212	Poecilia_reticulata
ENSLBEG00000020655	-	81	75.056	ENSPPYG00000009568	SMARCA4	95	78.042	Pongo_abelii
ENSLBEG00000020655	-	61	94.828	ENSPCAG00000014054	SMARCA4	73	94.828	Procavia_capensis
ENSLBEG00000020655	-	81	82.764	ENSPCOG00000023011	SMARCA4	95	83.048	Propithecus_coquereli
ENSLBEG00000020655	-	77	92.181	ENSPVAG00000007787	SMARCA4	77	92.181	Pteropus_vampyrus
ENSLBEG00000020655	-	98	83.968	ENSPNYG00000000717	smarca4a	92	83.810	Pundamilia_nyererei
ENSLBEG00000020655	-	94	84.008	ENSPNYG00000023995	-	96	84.077	Pundamilia_nyererei
ENSLBEG00000020655	-	99	84.820	ENSPNAG00000024136	smarca4a	96	85.000	Pygocentrus_nattereri
ENSLBEG00000020655	-	94	76.832	ENSPNAG00000006636	-	93	90.385	Pygocentrus_nattereri
ENSLBEG00000020655	-	81	82.995	ENSRNOG00000009271	Smarca4	77	83.151	Rattus_norvegicus
ENSLBEG00000020655	-	81	76.947	ENSRBIG00000038696	SMARCA4	95	83.048	Rhinopithecus_bieti
ENSLBEG00000020655	-	81	83.151	ENSRROG00000045509	SMARCA4	95	83.048	Rhinopithecus_roxellana
ENSLBEG00000020655	-	83	81.548	ENSSBOG00000026896	SMARCA4	97	83.048	Saimiri_boliviensis_boliviensis
ENSLBEG00000020655	-	81	83.281	ENSSHAG00000001642	SMARCA4	95	83.281	Sarcophilus_harrisii
ENSLBEG00000020655	-	98	83.256	ENSSFOG00015013823	smarca4	99	83.846	Scleropages_formosus
ENSLBEG00000020655	-	95	82.282	ENSSFOG00015009921	-	91	82.459	Scleropages_formosus
ENSLBEG00000020655	-	98	73.681	ENSSMAG00000003200	smarca4a	80	76.764	Scophthalmus_maximus
ENSLBEG00000020655	-	94	91.519	ENSSMAG00000014082	-	95	82.416	Scophthalmus_maximus
ENSLBEG00000020655	-	98	69.427	ENSSDUG00000017298	smarca4a	99	68.996	Seriola_dumerili
ENSLBEG00000020655	-	99	87.481	ENSSDUG00000005388	-	94	90.427	Seriola_dumerili
ENSLBEG00000020655	-	94	93.606	ENSSLDG00000023663	-	93	92.509	Seriola_lalandi_dorsalis
ENSLBEG00000020655	-	98	71.985	ENSSLDG00000024486	smarca4a	99	76.912	Seriola_lalandi_dorsalis
ENSLBEG00000020655	-	61	96.894	ENSSARG00000013477	SMARCA4	73	97.436	Sorex_araneus
ENSLBEG00000020655	-	79	74.821	ENSSPUG00000004558	SMARCA4	94	84.274	Sphenodon_punctatus
ENSLBEG00000020655	-	98	83.492	ENSSPAG00000004248	smarca4a	99	75.420	Stegastes_partitus
ENSLBEG00000020655	-	100	89.144	ENSSPAG00000012533	-	94	91.209	Stegastes_partitus
ENSLBEG00000020655	-	81	76.847	ENSSSCG00000013629	SMARCA4	77	82.919	Sus_scrofa
ENSLBEG00000020655	-	94	77.626	ENSTRUG00000001378	SMARCA4	82	91.986	Takifugu_rubripes
ENSLBEG00000020655	-	89	86.100	ENSTRUG00000004885	smarca4a	96	86.100	Takifugu_rubripes
ENSLBEG00000020655	-	98	87.500	ENSTNIG00000004536	SMARCA4	95	88.125	Tetraodon_nigroviridis
ENSLBEG00000020655	-	70	95.000	ENSTNIG00000004859	-	82	95.000	Tetraodon_nigroviridis
ENSLBEG00000020655	-	81	73.621	ENSTTRG00000009519	SMARCA4	95	75.632	Tursiops_truncatus
ENSLBEG00000020655	-	81	83.151	ENSUAMG00000014661	SMARCA4	95	83.307	Ursus_americanus
ENSLBEG00000020655	-	95	88.750	ENSUMAG00000022005	SMARCA4	92	90.877	Ursus_maritimus
ENSLBEG00000020655	-	94	76.794	ENSVVUG00000017820	SMARCA4	87	88.522	Vulpes_vulpes
ENSLBEG00000020655	-	98	81.595	ENSXETG00000009355	smarca4	95	81.930	Xenopus_tropicalis
ENSLBEG00000020655	-	99	87.003	ENSXCOG00000013494	-	96	88.685	Xiphophorus_couchianus
ENSLBEG00000020655	-	98	87.092	ENSXMAG00000007030	-	96	85.693	Xiphophorus_maculatus
ENSLBEG00000020655	-	73	89.206	ENSXMAG00000006321	smarca4a	100	75.727	Xiphophorus_maculatus