EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000020663 (Gene tree)
Gene ID: 110000744
Gene Symbol: -
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 25749 bases
Position: chrFKLU01000712.1:109991-135739
Accession: 110000744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027214	PIN_4	PF13638.6	1.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028517	-	3180	XM_020656093	ENSLBEP00000027214	972 (aa)	XP_020511749	UPI0009B3785B

Gene Model

Click here to download ENSLBEG00000020663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020663	-	57	35.017	ENSG00000116668	SWT1	59	35.017	Homo_sapiens
ENSLBEG00000020663	-	98	59.317	ENSAPOG00000014897	-	96	59.599	Acanthochromis_polyacanthus
ENSLBEG00000020663	-	57	36.442	ENSAMEG00000013585	SWT1	60	36.442	Ailuropoda_melanoleuca
ENSLBEG00000020663	-	98	58.787	ENSAOCG00000013932	swt1	97	59.119	Amphiprion_ocellaris
ENSLBEG00000020663	-	98	58.787	ENSAPEG00000009613	-	97	59.119	Amphiprion_percula
ENSLBEG00000020663	-	97	58.916	ENSATEG00000018946	swt1	95	59.679	Anabas_testudineus
ENSLBEG00000020663	-	57	38.235	ENSAPLG00000008607	SWT1	74	38.235	Anas_platyrhynchos
ENSLBEG00000020663	-	57	35.789	ENSACAG00000002276	SWT1	62	36.140	Anolis_carolinensis
ENSLBEG00000020663	-	59	35.570	ENSANAG00000027068	SWT1	61	35.570	Aotus_nancymaae
ENSLBEG00000020663	-	82	65.741	ENSACLG00000009742	swt1	96	65.741	Astatotilapia_calliptera
ENSLBEG00000020663	-	65	44.186	ENSAMXG00000010971	swt1	62	44.186	Astyanax_mexicanus
ENSLBEG00000020663	-	57	35.529	ENSCJAG00000005544	SWT1	59	35.529	Callithrix_jacchus
ENSLBEG00000020663	-	59	35.833	ENSCAFG00000013543	SWT1	62	35.284	Canis_familiaris
ENSLBEG00000020663	-	59	35.833	ENSCAFG00020015648	SWT1	65	35.833	Canis_lupus_dingo
ENSLBEG00000020663	-	57	35.664	ENSCHIG00000023511	SWT1	92	35.121	Capra_hircus
ENSLBEG00000020663	-	57	35.130	ENSTSYG00000010470	SWT1	60	35.304	Carlito_syrichta
ENSLBEG00000020663	-	53	35.701	ENSCPOG00000014251	SWT1	62	35.701	Cavia_porcellus
ENSLBEG00000020663	-	59	35.786	ENSCCAG00000033926	SWT1	61	35.953	Cebus_capucinus
ENSLBEG00000020663	-	59	34.391	ENSCATG00000042210	SWT1	95	34.391	Cercocebus_atys
ENSLBEG00000020663	-	59	35.000	ENSCLAG00000013959	SWT1	63	35.000	Chinchilla_lanigera
ENSLBEG00000020663	-	59	34.884	ENSCSAG00000012895	SWT1	61	34.884	Chlorocebus_sabaeus
ENSLBEG00000020663	-	59	36.851	ENSCPBG00000015691	SWT1	62	37.018	Chrysemys_picta_bellii
ENSLBEG00000020663	-	59	35.008	ENSCANG00000032207	SWT1	95	34.958	Colobus_angolensis_palliatus
ENSLBEG00000020663	-	57	35.813	ENSCGRG00001022955	Swt1	63	35.813	Cricetulus_griseus_chok1gshd
ENSLBEG00000020663	-	57	35.813	ENSCGRG00000010224	Swt1	60	35.813	Cricetulus_griseus_crigri
ENSLBEG00000020663	-	75	55.040	ENSCSEG00000017352	swt1	96	55.378	Cynoglossus_semilaevis
ENSLBEG00000020663	-	52	34.528	ENSDNOG00000005254	SWT1	59	34.528	Dasypus_novemcinctus
ENSLBEG00000020663	-	59	35.821	ENSDORG00000010531	Swt1	66	35.987	Dipodomys_ordii
ENSLBEG00000020663	-	57	34.622	ENSEASG00005005530	SWT1	63	34.622	Equus_asinus_asinus
ENSLBEG00000020663	-	57	33.042	ENSECAG00000012085	SWT1	63	33.042	Equus_caballus
ENSLBEG00000020663	-	59	50.671	ENSELUG00000020565	swt1	57	51.946	Esox_lucius
ENSLBEG00000020663	-	57	34.888	ENSFCAG00000011286	SWT1	60	34.888	Felis_catus
ENSLBEG00000020663	-	57	36.054	ENSFALG00000003206	SWT1	61	36.021	Ficedula_albicollis
ENSLBEG00000020663	-	59	36.348	ENSFDAG00000007569	SWT1	63	36.013	Fukomys_damarensis
ENSLBEG00000020663	-	99	49.151	ENSGAFG00000007803	-	95	49.637	Gambusia_affinis
ENSLBEG00000020663	-	59	37.415	ENSGAGG00000025050	SWT1	96	37.415	Gopherus_agassizii
ENSLBEG00000020663	-	52	34.915	ENSGGOG00000041167	-	89	34.915	Gorilla_gorilla
ENSLBEG00000020663	-	84	65.954	ENSHBUG00000006188	swt1	95	65.954	Haplochromis_burtoni
ENSLBEG00000020663	-	66	33.830	ENSHGLG00000006542	SWT1	73	33.830	Heterocephalus_glaber_female
ENSLBEG00000020663	-	66	33.830	ENSHGLG00100014408	SWT1	71	33.830	Heterocephalus_glaber_male
ENSLBEG00000020663	-	59	65.868	ENSHCOG00000016930	-	86	65.868	Hippocampus_comes
ENSLBEG00000020663	-	59	35.966	ENSSTOG00000010356	SWT1	62	35.966	Ictidomys_tridecemlineatus
ENSLBEG00000020663	-	60	36.408	ENSJJAG00000015927	Swt1	66	36.408	Jaculus_jaculus
ENSLBEG00000020663	-	99	50.403	ENSKMAG00000012533	swt1	96	50.729	Kryptolebias_marmoratus
ENSLBEG00000020663	-	59	37.838	ENSLACG00000009194	SWT1	81	37.838	Latimeria_chalumnae
ENSLBEG00000020663	-	57	43.396	ENSLOCG00000001749	swt1	97	42.328	Lepisosteus_oculatus
ENSLBEG00000020663	-	59	34.826	ENSLAFG00000004346	-	95	34.826	Loxodonta_africana
ENSLBEG00000020663	-	59	34.833	ENSMFAG00000031793	SWT1	96	34.783	Macaca_fascicularis
ENSLBEG00000020663	-	56	34.708	ENSMMUG00000013882	SWT1	92	34.441	Macaca_mulatta
ENSLBEG00000020663	-	59	34.833	ENSMNEG00000035502	SWT1	96	34.783	Macaca_nemestrina
ENSLBEG00000020663	-	59	34.564	ENSMLEG00000038692	SWT1	95	34.391	Mandrillus_leucophaeus
ENSLBEG00000020663	-	84	65.597	ENSMZEG00005018489	swt1	95	65.597	Maylandia_zebra
ENSLBEG00000020663	-	57	36.442	ENSMGAG00000000973	SWT1	93	36.442	Meleagris_gallopavo
ENSLBEG00000020663	-	57	33.810	ENSMAUG00000007996	Swt1	57	33.810	Mesocricetus_auratus
ENSLBEG00000020663	-	59	36.013	ENSMICG00000014975	SWT1	62	36.013	Microcebus_murinus
ENSLBEG00000020663	-	57	36.285	ENSMOCG00000009776	Swt1	60	36.285	Microtus_ochrogaster
ENSLBEG00000020663	-	57	34.609	ENSMODG00000007472	SWT1	59	34.609	Monodelphis_domestica
ENSLBEG00000020663	-	98	55.417	ENSMALG00000019308	swt1	96	55.321	Monopterus_albus
ENSLBEG00000020663	-	57	37.282	MGP_CAROLIEiJ_G0014692	Swt1	62	47.134	Mus_caroli
ENSLBEG00000020663	-	57	37.024	ENSMUSG00000052748	Swt1	62	45.860	Mus_musculus
ENSLBEG00000020663	-	57	36.395	MGP_PahariEiJ_G0027928	Swt1	62	45.860	Mus_pahari
ENSLBEG00000020663	-	57	36.953	MGP_SPRETEiJ_G0015499	Swt1	62	46.497	Mus_spretus
ENSLBEG00000020663	-	59	35.919	ENSMPUG00000011913	SWT1	62	35.919	Mustela_putorius_furo
ENSLBEG00000020663	-	57	35.540	ENSMLUG00000001142	SWT1	59	35.540	Myotis_lucifugus
ENSLBEG00000020663	-	57	35.951	ENSNGAG00000021080	Swt1	59	35.951	Nannospalax_galili
ENSLBEG00000020663	-	57	34.729	ENSNLEG00000018031	SWT1	59	34.729	Nomascus_leucogenys
ENSLBEG00000020663	-	84	63.855	ENSONIG00000009994	swt1	95	63.855	Oreochromis_niloticus
ENSLBEG00000020663	-	57	34.932	ENSOANG00000001013	-	70	34.932	Ornithorhynchus_anatinus
ENSLBEG00000020663	-	59	35.690	ENSOCUG00000004901	SWT1	63	35.690	Oryctolagus_cuniculus
ENSLBEG00000020663	-	97	47.347	ENSORLG00000009682	swt1	93	48.247	Oryzias_latipes
ENSLBEG00000020663	-	98	48.126	ENSORLG00020011654	swt1	93	48.936	Oryzias_latipes_hni
ENSLBEG00000020663	-	99	46.647	ENSORLG00015007734	swt1	93	48.026	Oryzias_latipes_hsok
ENSLBEG00000020663	-	97	47.804	ENSOMEG00000006607	swt1	96	47.930	Oryzias_melastigma
ENSLBEG00000020663	-	59	35.304	ENSOGAG00000016195	SWT1	62	35.304	Otolemur_garnettii
ENSLBEG00000020663	-	57	35.490	ENSOARG00000004156	SWT1	59	35.490	Ovis_aries
ENSLBEG00000020663	-	57	35.017	ENSPPAG00000021400	SWT1	59	35.017	Pan_paniscus
ENSLBEG00000020663	-	59	34.754	ENSPPRG00000023754	SWT1	63	34.754	Panthera_pardus
ENSLBEG00000020663	-	59	34.754	ENSPTIG00000021889	SWT1	63	34.754	Panthera_tigris_altaica
ENSLBEG00000020663	-	57	35.192	ENSPTRG00000001777	SWT1	59	35.192	Pan_troglodytes
ENSLBEG00000020663	-	59	34.391	ENSPANG00000005099	SWT1	95	34.391	Papio_anubis
ENSLBEG00000020663	-	57	47.857	ENSPKIG00000005979	swt1	57	47.772	Paramormyrops_kingsleyae
ENSLBEG00000020663	-	57	37.306	ENSPSIG00000008961	SWT1	60	37.306	Pelodiscus_sinensis
ENSLBEG00000020663	-	57	36.568	ENSPEMG00000008208	Swt1	59	36.568	Peromyscus_maniculatus_bairdii
ENSLBEG00000020663	-	57	34.010	ENSPCIG00000002443	SWT1	60	34.010	Phascolarctos_cinereus
ENSLBEG00000020663	-	99	47.024	ENSPFOG00000010988	-	90	58.714	Poecilia_formosa
ENSLBEG00000020663	-	99	47.368	ENSPLAG00000022908	-	95	47.786	Poecilia_latipinna
ENSLBEG00000020663	-	99	47.264	ENSPMEG00000006943	-	95	47.934	Poecilia_mexicana
ENSLBEG00000020663	-	66	43.379	ENSPREG00000014723	-	80	44.519	Poecilia_reticulata
ENSLBEG00000020663	-	57	35.702	ENSPPYG00000000415	SWT1	59	35.702	Pongo_abelii
ENSLBEG00000020663	-	57	33.506	ENSPVAG00000005968	SWT1	60	33.506	Pteropus_vampyrus
ENSLBEG00000020663	-	84	65.954	ENSPNYG00000012934	swt1	95	65.954	Pundamilia_nyererei
ENSLBEG00000020663	-	57	36.049	ENSRNOG00000032258	Swt1	62	36.049	Rattus_norvegicus
ENSLBEG00000020663	-	59	33.838	ENSRBIG00000040630	SWT1	95	33.784	Rhinopithecus_bieti
ENSLBEG00000020663	-	59	35.117	ENSSBOG00000028825	SWT1	61	35.294	Saimiri_boliviensis_boliviensis
ENSLBEG00000020663	-	57	35.714	ENSSHAG00000009241	SWT1	60	35.714	Sarcophilus_harrisii
ENSLBEG00000020663	-	57	47.872	ENSSFOG00015004895	swt1	55	47.872	Scleropages_formosus
ENSLBEG00000020663	-	97	57.908	ENSSMAG00000020761	-	80	58.281	Scophthalmus_maximus
ENSLBEG00000020663	-	97	61.267	ENSSDUG00000012345	swt1	96	61.152	Seriola_dumerili
ENSLBEG00000020663	-	97	61.059	ENSSLDG00000003821	swt1	96	60.942	Seriola_lalandi_dorsalis
ENSLBEG00000020663	-	59	37.479	ENSSPUG00000003899	SWT1	62	37.479	Sphenodon_punctatus
ENSLBEG00000020663	-	98	58.247	ENSSPAG00000001030	swt1	96	58.632	Stegastes_partitus
ENSLBEG00000020663	-	59	36.047	ENSSSCG00000015569	SWT1	62	36.545	Sus_scrofa
ENSLBEG00000020663	-	57	37.413	ENSTGUG00000003718	-	97	37.413	Taeniopygia_guttata
ENSLBEG00000020663	-	99	45.825	ENSTRUG00000006420	swt1	97	46.008	Takifugu_rubripes
ENSLBEG00000020663	-	57	34.083	ENSTTRG00000005914	SWT1	60	34.083	Tursiops_truncatus
ENSLBEG00000020663	-	59	36.288	ENSUAMG00000020937	SWT1	67	36.288	Ursus_americanus
ENSLBEG00000020663	-	59	36.288	ENSUMAG00000021918	SWT1	62	36.332	Ursus_maritimus
ENSLBEG00000020663	-	59	35.833	ENSVVUG00000009182	SWT1	64	35.833	Vulpes_vulpes
ENSLBEG00000020663	-	99	49.598	ENSXMAG00000023472	-	96	49.896	Xiphophorus_maculatus