EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000020842 (Gene tree)
Gene ID: 109980637
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 52422 bases
Position: chrFKLU01000002.1:5064194-5116615
Accession: 109980637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027476	ResIII	PF04851.15	2.9e-06	1	1
ENSLBEP00000027476	BRK	PF07533.16	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028788	-	12590	XM_020629090	ENSLBEP00000027476	3294 (aa)	XP_020484746	UPI0009B3C6BD

Gene Model

Click here to download ENSLBEG00000020842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020842	chd7	69	78.964	ENSG00000171316	CHD7	97	67.742	Homo_sapiens
ENSLBEG00000020842	chd7	82	86.425	ENSAPOG00000009351	chd7	97	85.592	Acanthochromis_polyacanthus
ENSLBEG00000020842	chd7	68	80.542	ENSAMEG00000005699	CHD7	98	59.054	Ailuropoda_melanoleuca
ENSLBEG00000020842	chd7	71	84.692	ENSACIG00000001590	chd7	98	76.578	Amphilophus_citrinellus
ENSLBEG00000020842	chd7	51	60.041	ENSACIG00000006440	chd8	61	64.155	Amphilophus_citrinellus
ENSLBEG00000020842	chd7	74	86.454	ENSAOCG00000002337	chd7	99	93.910	Amphiprion_ocellaris
ENSLBEG00000020842	chd7	100	84.705	ENSAPEG00000010332	chd7	100	84.924	Amphiprion_percula
ENSLBEG00000020842	chd7	70	87.099	ENSATEG00000002590	chd7	99	81.250	Anabas_testudineus
ENSLBEG00000020842	chd7	70	78.627	ENSAPLG00000005873	CHD7	97	58.955	Anas_platyrhynchos
ENSLBEG00000020842	chd7	71	79.250	ENSACAG00000005760	CHD7	97	59.387	Anolis_carolinensis
ENSLBEG00000020842	chd7	69	78.964	ENSANAG00000035300	CHD7	98	58.874	Aotus_nancymaae
ENSLBEG00000020842	chd7	52	60.027	ENSACLG00000019692	chd8	71	65.555	Astatotilapia_calliptera
ENSLBEG00000020842	chd7	77	69.388	ENSAMXG00000006180	chd7	97	68.953	Astyanax_mexicanus
ENSLBEG00000020842	chd7	68	78.918	ENSBTAG00000021841	CHD7	88	71.391	Bos_taurus
ENSLBEG00000020842	chd7	68	78.884	ENSCJAG00000009025	CHD7	98	58.863	Callithrix_jacchus
ENSLBEG00000020842	chd7	69	79.124	ENSCAFG00000007167	CHD7	97	59.252	Canis_familiaris
ENSLBEG00000020842	chd7	69	78.320	ENSCAFG00020015856	CHD7	97	58.465	Canis_lupus_dingo
ENSLBEG00000020842	chd7	68	78.884	ENSCHIG00000011729	CHD7	98	58.345	Capra_hircus
ENSLBEG00000020842	chd7	68	78.805	ENSTSYG00000004018	CHD7	97	59.048	Carlito_syrichta
ENSLBEG00000020842	chd7	69	74.024	ENSCAPG00000007952	CHD7	98	56.405	Cavia_aperea
ENSLBEG00000020842	chd7	69	79.203	ENSCPOG00000013385	CHD7	98	59.243	Cavia_porcellus
ENSLBEG00000020842	chd7	68	78.884	ENSCCAG00000025831	CHD7	98	58.632	Cebus_capucinus
ENSLBEG00000020842	chd7	69	78.964	ENSCATG00000020229	CHD7	97	58.967	Cercocebus_atys
ENSLBEG00000020842	chd7	66	79.044	ENSCLAG00000004679	CHD7	98	58.891	Chinchilla_lanigera
ENSLBEG00000020842	chd7	69	78.884	ENSCSAG00000014349	CHD7	97	58.919	Chlorocebus_sabaeus
ENSLBEG00000020842	chd7	52	81.050	ENSCHOG00000008478	CHD7	80	78.589	Choloepus_hoffmanni
ENSLBEG00000020842	chd7	76	80.978	ENSCPBG00000021517	CHD7	96	78.986	Chrysemys_picta_bellii
ENSLBEG00000020842	chd7	69	78.805	ENSCANG00000041382	CHD7	97	58.871	Colobus_angolensis_palliatus
ENSLBEG00000020842	chd7	69	79.363	ENSCGRG00001011949	Chd7	98	58.940	Cricetulus_griseus_chok1gshd
ENSLBEG00000020842	chd7	71	74.216	ENSCGRG00000000481	Chd7	88	66.825	Cricetulus_griseus_crigri
ENSLBEG00000020842	chd7	71	84.646	ENSCSEG00000017886	chd7	99	74.240	Cynoglossus_semilaevis
ENSLBEG00000020842	chd7	98	80.282	ENSCVAG00000017584	chd7	99	80.321	Cyprinodon_variegatus
ENSLBEG00000020842	chd7	77	70.343	ENSDARG00000075211	chd7	95	70.749	Danio_rerio
ENSLBEG00000020842	chd7	51	62.853	ENSDARG00000075543	chd8	71	63.162	Danio_rerio
ENSLBEG00000020842	chd7	68	79.203	ENSDNOG00000011674	CHD7	97	59.250	Dasypus_novemcinctus
ENSLBEG00000020842	chd7	68	79.044	ENSDORG00000003515	Chd7	97	58.877	Dipodomys_ordii
ENSLBEG00000020842	chd7	53	75.894	ENSETEG00000016689	-	52	76.168	Echinops_telfairi
ENSLBEG00000020842	chd7	68	79.090	ENSEASG00005016258	CHD7	98	58.880	Equus_asinus_asinus
ENSLBEG00000020842	chd7	50	62.084	ENSECAG00000016102	CHD8	62	63.100	Equus_caballus
ENSLBEG00000020842	chd7	76	79.266	ENSECAG00000001445	CHD7	97	68.154	Equus_caballus
ENSLBEG00000020842	chd7	75	83.211	ENSEEUG00000013559	CHD7	74	77.422	Erinaceus_europaeus
ENSLBEG00000020842	chd7	83	80.259	ENSELUG00000024442	chd7	91	80.518	Esox_lucius
ENSLBEG00000020842	chd7	67	79.077	ENSFCAG00000003849	CHD7	94	58.365	Felis_catus
ENSLBEG00000020842	chd7	70	79.110	ENSFALG00000005570	CHD7	99	58.726	Ficedula_albicollis
ENSLBEG00000020842	chd7	71	79.280	ENSFDAG00000000528	CHD7	98	58.987	Fukomys_damarensis
ENSLBEG00000020842	chd7	100	79.306	ENSFHEG00000001311	chd7	99	79.849	Fundulus_heteroclitus
ENSLBEG00000020842	chd7	59	88.645	ENSGMOG00000004232	chd7	94	89.331	Gadus_morhua
ENSLBEG00000020842	chd7	70	78.488	ENSGALG00000041080	CHD7	97	58.650	Gallus_gallus
ENSLBEG00000020842	chd7	80	81.415	ENSGAFG00000006858	chd7	97	81.564	Gambusia_affinis
ENSLBEG00000020842	chd7	66	86.924	ENSGACG00000014897	chd7	99	81.503	Gasterosteus_aculeatus
ENSLBEG00000020842	chd7	74	80.468	ENSGAGG00000017996	CHD7	91	79.467	Gopherus_agassizii
ENSLBEG00000020842	chd7	69	79.044	ENSGGOG00000012224	CHD7	98	59.015	Gorilla_gorilla
ENSLBEG00000020842	chd7	77	85.151	ENSHBUG00000019225	chd7	100	82.119	Haplochromis_burtoni
ENSLBEG00000020842	chd7	51	59.045	ENSHBUG00000002850	chd8	61	63.796	Haplochromis_burtoni
ENSLBEG00000020842	chd7	68	79.280	ENSHGLG00000017268	CHD7	97	58.894	Heterocephalus_glaber_female
ENSLBEG00000020842	chd7	68	79.280	ENSHGLG00100015649	CHD7	97	58.894	Heterocephalus_glaber_male
ENSLBEG00000020842	chd7	99	76.545	ENSHCOG00000014380	chd7	99	79.927	Hippocampus_comes
ENSLBEG00000020842	chd7	75	65.505	ENSIPUG00000007585	chd7	95	64.875	Ictalurus_punctatus
ENSLBEG00000020842	chd7	68	78.964	ENSSTOG00000011949	CHD7	99	59.626	Ictidomys_tridecemlineatus
ENSLBEG00000020842	chd7	70	79.203	ENSJJAG00000022064	Chd7	97	58.776	Jaculus_jaculus
ENSLBEG00000020842	chd7	98	81.818	ENSKMAG00000009724	chd7	99	81.722	Kryptolebias_marmoratus
ENSLBEG00000020842	chd7	50	63.333	ENSKMAG00000020106	chd8	60	64.203	Kryptolebias_marmoratus
ENSLBEG00000020842	chd7	63	73.754	ENSLACG00000002461	CHD7	98	56.582	Latimeria_chalumnae
ENSLBEG00000020842	chd7	51	67.578	ENSLACG00000011367	CHD8	65	66.864	Latimeria_chalumnae
ENSLBEG00000020842	chd7	64	74.689	ENSLOCG00000005062	chd7	98	56.586	Lepisosteus_oculatus
ENSLBEG00000020842	chd7	68	78.931	ENSLAFG00000000403	CHD7	96	64.384	Loxodonta_africana
ENSLBEG00000020842	chd7	69	78.964	ENSMFAG00000041825	CHD7	97	71.867	Macaca_fascicularis
ENSLBEG00000020842	chd7	69	78.964	ENSMMUG00000011584	CHD7	97	58.967	Macaca_mulatta
ENSLBEG00000020842	chd7	68	78.964	ENSMNEG00000040978	CHD7	97	59.037	Macaca_nemestrina
ENSLBEG00000020842	chd7	69	78.964	ENSMLEG00000038817	CHD7	97	58.967	Mandrillus_leucophaeus
ENSLBEG00000020842	chd7	100	81.558	ENSMAMG00000011569	chd7	100	81.110	Mastacembelus_armatus
ENSLBEG00000020842	chd7	51	59.445	ENSMZEG00005012027	chd8	61	64.286	Maylandia_zebra
ENSLBEG00000020842	chd7	77	84.946	ENSMZEG00005010646	chd7	100	81.970	Maylandia_zebra
ENSLBEG00000020842	chd7	70	78.566	ENSMGAG00000011092	CHD7	97	58.708	Meleagris_gallopavo
ENSLBEG00000020842	chd7	86	79.310	ENSMAUG00000001000	Chd7	72	81.393	Mesocricetus_auratus
ENSLBEG00000020842	chd7	68	79.044	ENSMICG00000002430	CHD7	97	59.102	Microcebus_murinus
ENSLBEG00000020842	chd7	69	79.170	ENSMOCG00000011408	Chd7	97	59.238	Microtus_ochrogaster
ENSLBEG00000020842	chd7	51	72.109	ENSMMOG00000021538	-	93	83.111	Mola_mola
ENSLBEG00000020842	chd7	71	79.522	ENSMODG00000008488	CHD7	98	54.684	Monodelphis_domestica
ENSLBEG00000020842	chd7	74	84.528	ENSMALG00000004389	chd7	99	83.974	Monopterus_albus
ENSLBEG00000020842	chd7	50	63.913	MGP_SPRETEiJ_G0026745	Chd7	97	59.041	Mus_spretus
ENSLBEG00000020842	chd7	57	79.283	ENSMPUG00000002338	CHD7	90	69.311	Mustela_putorius_furo
ENSLBEG00000020842	chd7	68	77.732	ENSMLUG00000015266	CHD7	97	57.705	Myotis_lucifugus
ENSLBEG00000020842	chd7	93	62.000	ENSNGAG00000010767	Chd7	98	58.908	Nannospalax_galili
ENSLBEG00000020842	chd7	77	79.514	ENSNBRG00000001280	chd7	98	79.862	Neolamprologus_brichardi
ENSLBEG00000020842	chd7	51	59.580	ENSNBRG00000017428	chd8	60	64.439	Neolamprologus_brichardi
ENSLBEG00000020842	chd7	70	78.964	ENSNLEG00000002027	CHD7	98	58.919	Nomascus_leucogenys
ENSLBEG00000020842	chd7	69	73.883	ENSMEUG00000010045	CHD7	82	73.669	Notamacropus_eugenii
ENSLBEG00000020842	chd7	68	78.884	ENSODEG00000002424	CHD7	98	58.832	Octodon_degus
ENSLBEG00000020842	chd7	52	60.000	ENSONIG00000015569	chd8	62	64.846	Oreochromis_niloticus
ENSLBEG00000020842	chd7	97	75.561	ENSONIG00000016614	chd7	100	77.645	Oreochromis_niloticus
ENSLBEG00000020842	chd7	69	79.283	ENSOCUG00000010034	CHD7	92	78.980	Oryctolagus_cuniculus
ENSLBEG00000020842	chd7	98	79.602	ENSORLG00000013492	chd7	99	79.885	Oryzias_latipes
ENSLBEG00000020842	chd7	98	80.496	ENSORLG00020020002	chd7	99	79.782	Oryzias_latipes_hni
ENSLBEG00000020842	chd7	98	80.570	ENSORLG00015020858	chd7	99	79.806	Oryzias_latipes_hsok
ENSLBEG00000020842	chd7	98	80.871	ENSOMEG00000016881	chd7	99	79.650	Oryzias_melastigma
ENSLBEG00000020842	chd7	69	79.283	ENSOGAG00000013905	CHD7	98	58.930	Otolemur_garnettii
ENSLBEG00000020842	chd7	70	74.200	ENSOARG00000016176	CHD7	93	66.120	Ovis_aries
ENSLBEG00000020842	chd7	69	78.964	ENSPPAG00000033330	CHD7	98	59.052	Pan_paniscus
ENSLBEG00000020842	chd7	67	79.140	ENSPPRG00000022248	CHD7	98	58.697	Panthera_pardus
ENSLBEG00000020842	chd7	67	78.123	ENSPTIG00000011702	CHD7	96	64.384	Panthera_tigris_altaica
ENSLBEG00000020842	chd7	69	78.964	ENSPTRG00000020286	CHD7	98	58.900	Pan_troglodytes
ENSLBEG00000020842	chd7	69	78.964	ENSPANG00000018419	CHD7	97	58.967	Papio_anubis
ENSLBEG00000020842	chd7	77	64.435	ENSPKIG00000009637	chd7	98	56.533	Paramormyrops_kingsleyae
ENSLBEG00000020842	chd7	69	79.825	ENSPSIG00000012003	CHD7	98	55.785	Pelodiscus_sinensis
ENSLBEG00000020842	chd7	74	86.835	ENSPMGG00000018543	chd7	97	86.769	Periophthalmus_magnuspinnatus
ENSLBEG00000020842	chd7	89	80.314	ENSPEMG00000023028	Chd7	73	77.752	Peromyscus_maniculatus_bairdii
ENSLBEG00000020842	chd7	66	81.069	ENSPCIG00000000025	-	94	81.069	Phascolarctos_cinereus
ENSLBEG00000020842	chd7	100	79.264	ENSPFOG00000004891	chd7	99	97.403	Poecilia_formosa
ENSLBEG00000020842	chd7	57	64.719	ENSPFOG00000010939	-	82	65.076	Poecilia_formosa
ENSLBEG00000020842	chd7	100	78.988	ENSPLAG00000023322	chd7	100	79.018	Poecilia_latipinna
ENSLBEG00000020842	chd7	77	74.648	ENSPMEG00000005879	chd7	85	78.183	Poecilia_mexicana
ENSLBEG00000020842	chd7	53	91.571	ENSPREG00000014744	chd7	96	75.969	Poecilia_reticulata
ENSLBEG00000020842	chd7	69	78.964	ENSPPYG00000018618	CHD7	98	58.967	Pongo_abelii
ENSLBEG00000020842	chd7	67	74.114	ENSPCAG00000000227	CHD7	75	74.196	Procavia_capensis
ENSLBEG00000020842	chd7	70	78.884	ENSPCOG00000013850	CHD7	97	58.798	Propithecus_coquereli
ENSLBEG00000020842	chd7	71	82.153	ENSPVAG00000011873	CHD7	90	82.153	Pteropus_vampyrus
ENSLBEG00000020842	chd7	51	59.297	ENSPNYG00000018020	chd8	61	64.110	Pundamilia_nyererei
ENSLBEG00000020842	chd7	77	79.461	ENSPNYG00000012490	chd7	99	80.173	Pundamilia_nyererei
ENSLBEG00000020842	chd7	51	59.947	ENSPNAG00000003683	chd8	60	64.965	Pygocentrus_nattereri
ENSLBEG00000020842	chd7	61	77.770	ENSPNAG00000011245	chd7	97	72.179	Pygocentrus_nattereri
ENSLBEG00000020842	chd7	92	64.348	ENSRNOG00000006689	Chd7	98	58.914	Rattus_norvegicus
ENSLBEG00000020842	chd7	69	77.680	ENSRBIG00000043575	CHD7	97	58.074	Rhinopithecus_bieti
ENSLBEG00000020842	chd7	68	78.884	ENSRROG00000008981	CHD7	97	58.756	Rhinopithecus_roxellana
ENSLBEG00000020842	chd7	69	78.964	ENSSBOG00000021462	CHD7	98	58.843	Saimiri_boliviensis_boliviensis
ENSLBEG00000020842	chd7	89	73.297	ENSSHAG00000011522	CHD7	98	55.529	Sarcophilus_harrisii
ENSLBEG00000020842	chd7	76	78.231	ENSSFOG00015015077	chd7	97	78.182	Scleropages_formosus
ENSLBEG00000020842	chd7	52	76.506	ENSSMAG00000001030	chd7	97	77.510	Scophthalmus_maximus
ENSLBEG00000020842	chd7	100	83.289	ENSSDUG00000013773	chd7	100	83.393	Seriola_dumerili
ENSLBEG00000020842	chd7	50	60.000	ENSSLDG00000001679	chd8	61	64.363	Seriola_lalandi_dorsalis
ENSLBEG00000020842	chd7	50	92.982	ENSSLDG00000022595	chd7	97	85.246	Seriola_lalandi_dorsalis
ENSLBEG00000020842	chd7	53	81.113	ENSSARG00000003387	CHD7	81	67.857	Sorex_araneus
ENSLBEG00000020842	chd7	83	77.387	ENSSPUG00000009235	CHD7	97	67.933	Sphenodon_punctatus
ENSLBEG00000020842	chd7	75	86.857	ENSSPAG00000006320	chd7	99	86.296	Stegastes_partitus
ENSLBEG00000020842	chd7	86	78.167	ENSSSCG00000006231	CHD7	94	58.635	Sus_scrofa
ENSLBEG00000020842	chd7	67	79.048	ENSTGUG00000011196	CHD7	99	58.650	Taeniopygia_guttata
ENSLBEG00000020842	chd7	68	80.693	ENSTRUG00000008632	chd7	100	79.859	Takifugu_rubripes
ENSLBEG00000020842	chd7	58	89.608	ENSTNIG00000002647	chd7	99	90.040	Tetraodon_nigroviridis
ENSLBEG00000020842	chd7	64	76.625	ENSTTRG00000004221	CHD7	94	69.231	Tursiops_truncatus
ENSLBEG00000020842	chd7	69	78.230	ENSUAMG00000025734	CHD7	84	76.340	Ursus_americanus
ENSLBEG00000020842	chd7	75	75.144	ENSUMAG00000010436	CHD7	93	71.429	Ursus_maritimus
ENSLBEG00000020842	chd7	69	79.124	ENSVVUG00000018063	CHD7	97	59.252	Vulpes_vulpes
ENSLBEG00000020842	chd7	74	78.393	ENSXETG00000026004	chd8	77	67.936	Xenopus_tropicalis
ENSLBEG00000020842	chd7	100	78.981	ENSXMAG00000018590	chd7	100	79.364	Xiphophorus_maculatus