EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000020855 (Gene tree)
Gene ID: 109990312
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 16825 bases
Position: chrFKLU01000180.1:558570-575394
Accession: 109990312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027538	RRM_5	PF13893.6	6e-08	1	2
ENSLBEP00000027538	RRM_5	PF13893.6	6e-08	2	2
ENSLBEP00000027538	RRM_1	PF00076.22	5.1e-42	1	3
ENSLBEP00000027538	RRM_1	PF00076.22	5.1e-42	2	3
ENSLBEP00000027538	RRM_1	PF00076.22	5.1e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028854	-	9666	XM_020642404	ENSLBEP00000027538	3221 (aa)	XP_020498060	-

Gene Model

Click here to download ENSLBEG00000020855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020855	si:ch1073-335m2.2	72	72.000	ENSG00000065526	SPEN	85	84.462	Homo_sapiens
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSAPOG00000009853	-	98	65.957	Acanthochromis_polyacanthus
ENSLBEG00000020855	si:ch1073-335m2.2	100	79.340	ENSAPOG00000011411	si:ch1073-335m2.2	100	79.285	Acanthochromis_polyacanthus
ENSLBEG00000020855	si:ch1073-335m2.2	60	81.065	ENSAMEG00000011817	SPEN	73	72.000	Ailuropoda_melanoleuca
ENSLBEG00000020855	si:ch1073-335m2.2	89	76.716	ENSAOCG00000008077	si:ch1073-335m2.2	99	76.561	Amphiprion_ocellaris
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSAOCG00000014505	-	53	65.957	Amphiprion_ocellaris
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSAPEG00000010288	-	53	65.957	Amphiprion_percula
ENSLBEG00000020855	si:ch1073-335m2.2	100	79.503	ENSAPEG00000013515	si:ch1073-335m2.2	100	79.393	Amphiprion_percula
ENSLBEG00000020855	si:ch1073-335m2.2	100	77.917	ENSATEG00000007674	si:ch1073-335m2.2	100	78.160	Anabas_testudineus
ENSLBEG00000020855	si:ch1073-335m2.2	99	83.432	ENSATEG00000005627	-	51	83.432	Anabas_testudineus
ENSLBEG00000020855	si:ch1073-335m2.2	99	81.065	ENSAPLG00000012618	SPEN	91	81.065	Anas_platyrhynchos
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.530	ENSACLG00000016922	-	97	82.530	Astatotilapia_calliptera
ENSLBEG00000020855	si:ch1073-335m2.2	100	73.877	ENSACLG00000021433	si:ch1073-335m2.2	100	73.932	Astatotilapia_calliptera
ENSLBEG00000020855	si:ch1073-335m2.2	99	81.928	ENSAMXG00000012485	spen	97	80.473	Astyanax_mexicanus
ENSLBEG00000020855	si:ch1073-335m2.2	84	76.503	ENSBTAG00000018729	SPEN	75	76.503	Bos_taurus
ENSLBEG00000020855	si:ch1073-335m2.2	71	78.333	ENSCJAG00000008527	SPEN	72	78.333	Callithrix_jacchus
ENSLBEG00000020855	si:ch1073-335m2.2	65	59.486	ENSCAFG00000016132	-	56	60.040	Canis_familiaris
ENSLBEG00000020855	si:ch1073-335m2.2	81	77.049	ENSCHIG00000025070	SPEN	74	77.049	Capra_hircus
ENSLBEG00000020855	si:ch1073-335m2.2	62	81.065	ENSTSYG00000036016	SPEN	69	81.065	Carlito_syrichta
ENSLBEG00000020855	si:ch1073-335m2.2	83	76.796	ENSCAPG00000013803	SPEN	92	76.796	Cavia_aperea
ENSLBEG00000020855	si:ch1073-335m2.2	79	76.796	ENSCPOG00000014036	SPEN	75	76.796	Cavia_porcellus
ENSLBEG00000020855	si:ch1073-335m2.2	72	72.500	ENSCCAG00000020258	SPEN	72	72.500	Cebus_capucinus
ENSLBEG00000020855	si:ch1073-335m2.2	76	80.741	ENSCATG00000015079	SPEN	71	79.856	Cercocebus_atys
ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	ENSCSAG00000000841	SPEN	73	72.500	Chlorocebus_sabaeus
ENSLBEG00000020855	si:ch1073-335m2.2	55	81.065	ENSCPBG00000010477	SPEN	53	81.065	Chrysemys_picta_bellii
ENSLBEG00000020855	si:ch1073-335m2.2	85	54.740	ENSCANG00000034547	SPEN	72	72.500	Colobus_angolensis_palliatus
ENSLBEG00000020855	si:ch1073-335m2.2	81	80.952	ENSCGRG00001007725	Spen	73	80.952	Cricetulus_griseus_chok1gshd
ENSLBEG00000020855	si:ch1073-335m2.2	71	80.952	ENSCGRG00000010581	Spen	73	80.952	Cricetulus_griseus_crigri
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSCVAG00000016346	-	97	82.249	Cyprinodon_variegatus
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.008	ENSCVAG00000009075	si:ch1073-335m2.2	100	69.130	Cyprinodon_variegatus
ENSLBEG00000020855	si:ch1073-335m2.2	99	79.290	ENSDARG00000074245	spen	100	80.741	Danio_rerio
ENSLBEG00000020855	si:ch1073-335m2.2	99	57.855	ENSDARG00000074332	si:ch1073-335m2.2	100	57.582	Danio_rerio
ENSLBEG00000020855	si:ch1073-335m2.2	87	59.372	ENSDNOG00000041948	SPEN	74	76.503	Dasypus_novemcinctus
ENSLBEG00000020855	si:ch1073-335m2.2	81	81.065	ENSDORG00000023909	Spen	75	77.348	Dipodomys_ordii
ENSLBEG00000020855	si:ch1073-335m2.2	92	77.049	ENSEASG00005015911	SPEN	83	79.137	Equus_asinus_asinus
ENSLBEG00000020855	si:ch1073-335m2.2	84	77.049	ENSECAG00000008833	SPEN	74	79.137	Equus_caballus
ENSLBEG00000020855	si:ch1073-335m2.2	53	83.721	ENSEEUG00000010255	SPEN	53	83.721	Erinaceus_europaeus
ENSLBEG00000020855	si:ch1073-335m2.2	97	68.133	ENSELUG00000007726	si:ch1073-335m2.2	99	68.402	Esox_lucius
ENSLBEG00000020855	si:ch1073-335m2.2	58	80.473	ENSFALG00000003551	SPEN	96	80.473	Ficedula_albicollis
ENSLBEG00000020855	si:ch1073-335m2.2	70	80.473	ENSFDAG00000010212	SPEN	73	77.222	Fukomys_damarensis
ENSLBEG00000020855	si:ch1073-335m2.2	100	68.485	ENSFHEG00000004544	si:ch1073-335m2.2	100	68.455	Fundulus_heteroclitus
ENSLBEG00000020855	si:ch1073-335m2.2	100	65.981	ENSGMOG00000008156	si:ch1073-335m2.2	100	65.760	Gadus_morhua
ENSLBEG00000020855	si:ch1073-335m2.2	71	81.325	ENSGMOG00000008397	-	80	81.325	Gadus_morhua
ENSLBEG00000020855	si:ch1073-335m2.2	96	80.473	ENSGALG00000036932	SPEN	92	80.473	Gallus_gallus
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.311	ENSGAFG00000021570	si:ch1073-335m2.2	100	69.311	Gambusia_affinis
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSGAFG00000015819	-	97	82.249	Gambusia_affinis
ENSLBEG00000020855	si:ch1073-335m2.2	51	83.735	ENSGACG00000005341	-	51	83.735	Gasterosteus_aculeatus
ENSLBEG00000020855	si:ch1073-335m2.2	100	75.696	ENSGACG00000001176	si:ch1073-335m2.2	100	75.791	Gasterosteus_aculeatus
ENSLBEG00000020855	si:ch1073-335m2.2	70	81.065	ENSGAGG00000020785	SPEN	66	81.065	Gopherus_agassizii
ENSLBEG00000020855	si:ch1073-335m2.2	72	72.000	ENSGGOG00000012041	SPEN	73	72.000	Gorilla_gorilla
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.530	ENSHBUG00000020626	-	97	82.530	Haplochromis_burtoni
ENSLBEG00000020855	si:ch1073-335m2.2	100	76.642	ENSHBUG00000023253	si:ch1073-335m2.2	100	76.515	Haplochromis_burtoni
ENSLBEG00000020855	si:ch1073-335m2.2	64	77.348	ENSHGLG00000019259	SPEN	63	72.000	Heterocephalus_glaber_female
ENSLBEG00000020855	si:ch1073-335m2.2	97	69.575	ENSHCOG00000006004	si:ch1073-335m2.2	99	69.512	Hippocampus_comes
ENSLBEG00000020855	si:ch1073-335m2.2	99	81.325	ENSIPUG00000021668	spen	97	81.325	Ictalurus_punctatus
ENSLBEG00000020855	si:ch1073-335m2.2	96	56.847	ENSIPUG00000018212	si:ch1073-335m2.2	99	56.932	Ictalurus_punctatus
ENSLBEG00000020855	si:ch1073-335m2.2	84	57.579	ENSSTOG00000021428	SPEN	84	76.503	Ictidomys_tridecemlineatus
ENSLBEG00000020855	si:ch1073-335m2.2	82	80.473	ENSJJAG00000010882	Spen	76	76.796	Jaculus_jaculus
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.840	ENSKMAG00000003882	-	97	82.840	Kryptolebias_marmoratus
ENSLBEG00000020855	si:ch1073-335m2.2	100	72.838	ENSKMAG00000021725	si:ch1073-335m2.2	100	72.608	Kryptolebias_marmoratus
ENSLBEG00000020855	si:ch1073-335m2.2	53	80.473	ENSLACG00000003258	SPEN	91	80.473	Latimeria_chalumnae
ENSLBEG00000020855	si:ch1073-335m2.2	54	79.412	ENSLOCG00000007896	si:ch1073-335m2.2	97	68.075	Lepisosteus_oculatus
ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	ENSMFAG00000041974	SPEN	72	72.500	Macaca_fascicularis
ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	ENSMMUG00000008026	SPEN	73	72.500	Macaca_mulatta
ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	ENSMNEG00000042402	SPEN	72	72.500	Macaca_nemestrina
ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	ENSMLEG00000039293	SPEN	72	72.500	Mandrillus_leucophaeus
ENSLBEG00000020855	si:ch1073-335m2.2	100	78.177	ENSMAMG00000023870	si:ch1073-335m2.2	100	78.153	Mastacembelus_armatus
ENSLBEG00000020855	si:ch1073-335m2.2	88	82.530	ENSMZEG00005021491	-	96	82.530	Maylandia_zebra
ENSLBEG00000020855	si:ch1073-335m2.2	100	73.794	ENSMZEG00005011762	si:ch1073-335m2.2	100	73.879	Maylandia_zebra
ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	ENSMAUG00000008318	Spen	76	72.500	Mesocricetus_auratus
ENSLBEG00000020855	si:ch1073-335m2.2	73	81.065	ENSMICG00000030994	SPEN	74	81.065	Microcebus_murinus
ENSLBEG00000020855	si:ch1073-335m2.2	72	72.000	ENSMOCG00000016083	Spen	84	72.000	Microtus_ochrogaster
ENSLBEG00000020855	si:ch1073-335m2.2	100	78.129	ENSMMOG00000021742	si:ch1073-335m2.2	100	78.006	Mola_mola
ENSLBEG00000020855	si:ch1073-335m2.2	99	81.657	ENSMALG00000008625	-	51	81.657	Monopterus_albus
ENSLBEG00000020855	si:ch1073-335m2.2	69	72.000	MGP_CAROLIEiJ_G0026745	Spen	67	72.000	Mus_caroli
ENSLBEG00000020855	si:ch1073-335m2.2	69	72.500	MGP_SPRETEiJ_G0027724	Spen	64	72.500	Mus_spretus
ENSLBEG00000020855	si:ch1073-335m2.2	57	77.348	ENSMPUG00000016317	SPEN	71	77.348	Mustela_putorius_furo
ENSLBEG00000020855	si:ch1073-335m2.2	82	82.292	ENSMLUG00000010144	SPEN	99	68.343	Myotis_lucifugus
ENSLBEG00000020855	si:ch1073-335m2.2	74	59.122	ENSNGAG00000000641	Spen	88	71.000	Nannospalax_galili
ENSLBEG00000020855	si:ch1073-335m2.2	100	74.413	ENSNBRG00000005733	si:ch1073-335m2.2	100	74.406	Neolamprologus_brichardi
ENSLBEG00000020855	si:ch1073-335m2.2	83	83.133	ENSNBRG00000022090	-	96	81.657	Neolamprologus_brichardi
ENSLBEG00000020855	si:ch1073-335m2.2	72	72.000	ENSNLEG00000007652	SPEN	72	72.000	Nomascus_leucogenys
ENSLBEG00000020855	si:ch1073-335m2.2	75	78.947	ENSMEUG00000002422	SPEN	63	78.947	Notamacropus_eugenii
ENSLBEG00000020855	si:ch1073-335m2.2	56	81.065	ENSOPRG00000015800	SPEN	52	81.065	Ochotona_princeps
ENSLBEG00000020855	si:ch1073-335m2.2	51	79.882	ENSODEG00000016644	SPEN	79	79.882	Octodon_degus
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSONIG00000006573	-	99	73.105	Oreochromis_niloticus
ENSLBEG00000020855	si:ch1073-335m2.2	59	76.796	ENSOCUG00000010840	SPEN	57	76.796	Oryctolagus_cuniculus
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.390	ENSORLG00000018414	si:ch1073-335m2.2	100	69.453	Oryzias_latipes
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.329	ENSORLG00020009351	si:ch1073-335m2.2	100	69.392	Oryzias_latipes_hni
ENSLBEG00000020855	si:ch1073-335m2.2	50	83.133	ENSORLG00015022085	-	51	83.133	Oryzias_latipes_hsok
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.391	ENSORLG00015005537	si:ch1073-335m2.2	100	69.599	Oryzias_latipes_hsok
ENSLBEG00000020855	si:ch1073-335m2.2	100	71.411	ENSOMEG00000004509	si:ch1073-335m2.2	100	71.288	Oryzias_melastigma
ENSLBEG00000020855	si:ch1073-335m2.2	99	83.735	ENSOMEG00000007639	-	96	66.232	Oryzias_melastigma
ENSLBEG00000020855	si:ch1073-335m2.2	81	81.065	ENSOGAG00000025110	SPEN	75	60.020	Otolemur_garnettii
ENSLBEG00000020855	si:ch1073-335m2.2	81	77.049	ENSOARG00000008477	SPEN	74	77.049	Ovis_aries
ENSLBEG00000020855	si:ch1073-335m2.2	71	72.000	ENSPPAG00000035690	SPEN	72	72.000	Pan_paniscus
ENSLBEG00000020855	si:ch1073-335m2.2	72	72.000	ENSPTRG00000000210	SPEN	73	72.000	Pan_troglodytes
ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	ENSPANG00000006293	SPEN	72	72.500	Papio_anubis
ENSLBEG00000020855	si:ch1073-335m2.2	100	45.512	ENSPKIG00000002617	SPEN	91	68.561	Paramormyrops_kingsleyae
ENSLBEG00000020855	si:ch1073-335m2.2	96	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	97	92.857	Paramormyrops_kingsleyae
ENSLBEG00000020855	si:ch1073-335m2.2	69	81.065	ENSPSIG00000008026	SPEN	55	81.065	Pelodiscus_sinensis
ENSLBEG00000020855	si:ch1073-335m2.2	81	81.065	ENSPEMG00000022997	Spen	85	72.000	Peromyscus_maniculatus_bairdii
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.205	ENSPFOG00000017986	si:ch1073-335m2.2	100	69.315	Poecilia_formosa
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.583	ENSPLAG00000016625	si:ch1073-335m2.2	100	69.736	Poecilia_latipinna
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.449	ENSPMEG00000002674	si:ch1073-335m2.2	100	69.559	Poecilia_mexicana
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.705	ENSPREG00000005357	si:ch1073-335m2.2	100	69.920	Poecilia_reticulata
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSPREG00000010399	-	97	82.249	Poecilia_reticulata
ENSLBEG00000020855	si:ch1073-335m2.2	72	72.000	ENSPPYG00000001834	SPEN	73	72.000	Pongo_abelii
ENSLBEG00000020855	si:ch1073-335m2.2	72	76.796	ENSPCAG00000009543	SPEN	68	76.796	Procavia_capensis
ENSLBEG00000020855	si:ch1073-335m2.2	80	82.390	ENSPCOG00000021735	SPEN	72	82.390	Propithecus_coquereli
ENSLBEG00000020855	si:ch1073-335m2.2	62	74.863	ENSPVAG00000013794	SPEN	56	74.863	Pteropus_vampyrus
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.530	ENSPNYG00000012379	-	97	81.065	Pundamilia_nyererei
ENSLBEG00000020855	si:ch1073-335m2.2	100	74.382	ENSPNYG00000009042	si:ch1073-335m2.2	100	74.375	Pundamilia_nyererei
ENSLBEG00000020855	si:ch1073-335m2.2	100	58.662	ENSPNAG00000011452	si:ch1073-335m2.2	100	58.692	Pygocentrus_nattereri
ENSLBEG00000020855	si:ch1073-335m2.2	99	81.325	ENSPNAG00000020795	spen	97	79.882	Pygocentrus_nattereri
ENSLBEG00000020855	si:ch1073-335m2.2	64	81.065	ENSRNOG00000033556	Spen	87	81.065	Rattus_norvegicus
ENSLBEG00000020855	si:ch1073-335m2.2	81	72.500	ENSRBIG00000039654	SPEN	73	72.500	Rhinopithecus_bieti
ENSLBEG00000020855	si:ch1073-335m2.2	84	57.879	ENSRROG00000035686	SPEN	72	72.500	Rhinopithecus_roxellana
ENSLBEG00000020855	si:ch1073-335m2.2	63	58.081	ENSSBOG00000028770	SPEN	75	72.000	Saimiri_boliviensis_boliviensis
ENSLBEG00000020855	si:ch1073-335m2.2	71	76.923	ENSSHAG00000004960	SPEN	99	70.093	Sarcophilus_harrisii
ENSLBEG00000020855	si:ch1073-335m2.2	99	84.024	ENSSFOG00015010267	si:ch1073-335m2.2	98	84.024	Scleropages_formosus
ENSLBEG00000020855	si:ch1073-335m2.2	87	82.840	ENSSFOG00015007131	si:ch1073-335m2.2	97	82.840	Scleropages_formosus
ENSLBEG00000020855	si:ch1073-335m2.2	100	78.428	ENSSMAG00000000125	si:ch1073-335m2.2	100	78.489	Scophthalmus_maximus
ENSLBEG00000020855	si:ch1073-335m2.2	98	82.840	ENSSMAG00000008996	-	96	82.840	Scophthalmus_maximus
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.840	ENSSDUG00000003476	-	91	66.288	Seriola_dumerili
ENSLBEG00000020855	si:ch1073-335m2.2	100	82.194	ENSSDUG00000008416	si:ch1073-335m2.2	100	82.256	Seriola_dumerili
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.840	ENSSLDG00000012950	-	91	66.288	Seriola_lalandi_dorsalis
ENSLBEG00000020855	si:ch1073-335m2.2	100	76.641	ENSSLDG00000023347	si:ch1073-335m2.2	100	76.472	Seriola_lalandi_dorsalis
ENSLBEG00000020855	si:ch1073-335m2.2	100	79.963	ENSSPAG00000012454	si:ch1073-335m2.2	100	79.810	Stegastes_partitus
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSSPAG00000006014	-	91	67.954	Stegastes_partitus
ENSLBEG00000020855	si:ch1073-335m2.2	73	59.289	ENSSSCG00000034484	SPEN	76	59.625	Sus_scrofa
ENSLBEG00000020855	si:ch1073-335m2.2	88	70.617	ENSTRUG00000021008	si:ch1073-335m2.2	100	70.582	Takifugu_rubripes
ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	ENSTRUG00000024350	-	51	82.249	Takifugu_rubripes
ENSLBEG00000020855	si:ch1073-335m2.2	60	81.065	ENSTBEG00000003628	SPEN	54	81.065	Tupaia_belangeri
ENSLBEG00000020855	si:ch1073-335m2.2	71	76.503	ENSTTRG00000015704	SPEN	66	76.503	Tursiops_truncatus
ENSLBEG00000020855	si:ch1073-335m2.2	60	81.657	ENSUAMG00000009600	SPEN	73	72.500	Ursus_americanus
ENSLBEG00000020855	si:ch1073-335m2.2	59	81.657	ENSUMAG00000021641	SPEN	73	72.500	Ursus_maritimus
ENSLBEG00000020855	si:ch1073-335m2.2	73	92.857	ENSVVUG00000028951	SPEN	52	92.857	Vulpes_vulpes
ENSLBEG00000020855	si:ch1073-335m2.2	54	79.882	ENSXETG00000023114	SPEN	94	79.882	Xenopus_tropicalis
ENSLBEG00000020855	si:ch1073-335m2.2	100	67.392	ENSXCOG00000004516	si:ch1073-335m2.2	99	70.093	Xiphophorus_couchianus
ENSLBEG00000020855	si:ch1073-335m2.2	100	69.848	ENSXMAG00000029887	si:ch1073-335m2.2	100	69.817	Xiphophorus_maculatus
ENSLBEG00000020855	si:ch1073-335m2.2	99	81.657	ENSXMAG00000021384	-	97	81.657	Xiphophorus_maculatus