EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020858 (Gene tree)
Gene ID: 109980576
Gene Symbol: rbm5
Alias: wu:fc25a08|wu:fe06f12
Full Name: RNA-binding protein 5-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9560 bases
Position: chrFKLU01000023.1:511325-520884
Accession: 109980576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027531	zf-RanBP	PF00641.18	6e-10	1	1
ENSLBEP00000027486	zf-RanBP	PF00641.18	6.5e-10	1	1
ENSLBEP00000027486	RRM_1	PF00076.22	6.5e-12	1	1
ENSLBEP00000027531	RRM_1	PF00076.22	2.3e-11	1	1
ENSLBEP00000027531	G-patch	PF01585.23	1.5e-19	1	1
ENSLBEP00000027486	G-patch	PF01585.23	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028847	-	3565	-	ENSLBEP00000027531	798 (aa)	-	-
ENSLBET00000028800	-	3724	XM_020628971	ENSLBEP00000027486	851 (aa)	XP_020484627	UPI0009B3A27B

Gene Model

Click here to download ENSLBEG00000020858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020858	rbm5	85	42.762	ENSLBEG00000007620	rbm10	77	41.992
ENSLBEG00000020858	rbm5	62	64.038	ENSLBEG00000002522	-	83	68.070
ENSLBEG00000020858	rbm5	100	62.993	ENSLBEG00000010877	-	94	62.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020858	rbm5	100	60.859	ENSG00000003756	RBM5	100	60.438	Homo_sapiens
ENSLBEG00000020858	rbm5	100	65.076	ENSAPOG00000006011	-	100	65.425	Acanthochromis_polyacanthus
ENSLBEG00000020858	rbm5	100	87.981	ENSAPOG00000016625	rbm5	100	88.098	Acanthochromis_polyacanthus
ENSLBEG00000020858	rbm5	100	60.743	ENSAMEG00000012005	RBM5	100	60.323	Ailuropoda_melanoleuca
ENSLBEG00000020858	rbm5	70	86.207	ENSACIG00000007571	rbm5	100	86.207	Amphilophus_citrinellus
ENSLBEG00000020858	rbm5	99	58.974	ENSACIG00000021310	-	90	67.010	Amphilophus_citrinellus
ENSLBEG00000020858	rbm5	100	87.879	ENSAOCG00000002880	rbm5	100	87.879	Amphiprion_ocellaris
ENSLBEG00000020858	rbm5	99	62.894	ENSAOCG00000017312	-	99	62.894	Amphiprion_ocellaris
ENSLBEG00000020858	rbm5	96	83.398	ENSAPEG00000011862	rbm5	92	86.176	Amphiprion_percula
ENSLBEG00000020858	rbm5	100	65.192	ENSAPEG00000018222	RBM5	100	65.308	Amphiprion_percula
ENSLBEG00000020858	rbm5	100	66.246	ENSATEG00000003838	-	100	65.708	Anabas_testudineus
ENSLBEG00000020858	rbm5	100	87.266	ENSATEG00000024663	rbm5	100	87.266	Anabas_testudineus
ENSLBEG00000020858	rbm5	97	60.375	ENSAPLG00000011176	RBM5	99	63.648	Anas_platyrhynchos
ENSLBEG00000020858	rbm5	100	58.918	ENSACAG00000008580	RBM5	100	60.457	Anolis_carolinensis
ENSLBEG00000020858	rbm5	100	60.718	ENSANAG00000025199	RBM5	100	60.438	Aotus_nancymaae
ENSLBEG00000020858	rbm5	89	80.488	ENSACLG00000024198	RBM5	100	80.952	Astatotilapia_calliptera
ENSLBEG00000020858	rbm5	100	87.719	ENSACLG00000012748	rbm5	100	86.550	Astatotilapia_calliptera
ENSLBEG00000020858	rbm5	90	74.216	ENSAMXG00000008146	rbm5	100	74.486	Astyanax_mexicanus
ENSLBEG00000020858	rbm5	100	60.834	ENSBTAG00000006330	RBM5	100	60.438	Bos_taurus
ENSLBEG00000020858	rbm5	100	60.859	ENSCJAG00000004740	RBM5	100	66.026	Callithrix_jacchus
ENSLBEG00000020858	rbm5	100	60.859	ENSCAFG00000010866	RBM5	100	60.438	Canis_familiaris
ENSLBEG00000020858	rbm5	100	60.859	ENSCAFG00020022126	RBM5	100	60.438	Canis_lupus_dingo
ENSLBEG00000020858	rbm5	100	60.976	ENSCHIG00000018435	RBM5	100	60.554	Capra_hircus
ENSLBEG00000020858	rbm5	86	58.974	ENSTSYG00000004158	RBM5	100	58.824	Carlito_syrichta
ENSLBEG00000020858	rbm5	100	50.831	ENSCAPG00000013495	RBM5	100	50.116	Cavia_aperea
ENSLBEG00000020858	rbm5	100	61.118	ENSCPOG00000008151	RBM5	100	60.529	Cavia_porcellus
ENSLBEG00000020858	rbm5	99	60.631	ENSCCAG00000026401	RBM5	100	59.748	Cebus_capucinus
ENSLBEG00000020858	rbm5	100	60.859	ENSCATG00000041038	RBM5	100	60.438	Cercocebus_atys
ENSLBEG00000020858	rbm5	100	61.208	ENSCLAG00000007873	RBM5	100	60.620	Chinchilla_lanigera
ENSLBEG00000020858	rbm5	100	60.859	ENSCSAG00000014401	RBM5	100	60.438	Chlorocebus_sabaeus
ENSLBEG00000020858	rbm5	74	68.077	ENSCHOG00000009429	RBM5	85	55.286	Choloepus_hoffmanni
ENSLBEG00000020858	rbm5	92	63.405	ENSCPBG00000002406	RBM5	100	61.714	Chrysemys_picta_bellii
ENSLBEG00000020858	rbm5	100	60.299	ENSCANG00000031250	RBM5	100	59.631	Colobus_angolensis_palliatus
ENSLBEG00000020858	rbm5	100	61.227	ENSCGRG00001010543	Rbm5	100	60.554	Cricetulus_griseus_chok1gshd
ENSLBEG00000020858	rbm5	100	61.227	ENSCGRG00000008475	Rbm5	100	60.554	Cricetulus_griseus_crigri
ENSLBEG00000020858	rbm5	98	81.368	ENSCSEG00000000596	rbm5	97	82.181	Cynoglossus_semilaevis
ENSLBEG00000020858	rbm5	100	80.420	ENSCVAG00000005655	rbm5	100	81.469	Cyprinodon_variegatus
ENSLBEG00000020858	rbm5	100	62.069	ENSDARG00000098280	rbm5	100	67.869	Danio_rerio
ENSLBEG00000020858	rbm5	100	61.324	ENSDNOG00000011756	RBM5	100	60.900	Dasypus_novemcinctus
ENSLBEG00000020858	rbm5	100	60.743	ENSDORG00000007692	Rbm5	100	60.438	Dipodomys_ordii
ENSLBEG00000020858	rbm5	92	58.690	ENSETEG00000012773	RBM5	93	58.978	Echinops_telfairi
ENSLBEG00000020858	rbm5	75	57.949	ENSEBUG00000017034	rbm5	87	60.836	Eptatretus_burgeri
ENSLBEG00000020858	rbm5	100	60.859	ENSEASG00005011835	RBM5	100	60.438	Equus_asinus_asinus
ENSLBEG00000020858	rbm5	100	60.859	ENSECAG00000020447	RBM5	100	60.438	Equus_caballus
ENSLBEG00000020858	rbm5	67	69.756	ENSEEUG00000005943	RBM5	87	67.317	Erinaceus_europaeus
ENSLBEG00000020858	rbm5	100	77.163	ENSELUG00000022467	rbm5	100	74.740	Esox_lucius
ENSLBEG00000020858	rbm5	100	61.092	ENSFCAG00000014639	RBM5	100	60.669	Felis_catus
ENSLBEG00000020858	rbm5	92	62.907	ENSFALG00000008828	RBM5	100	63.122	Ficedula_albicollis
ENSLBEG00000020858	rbm5	100	61.324	ENSFDAG00000001897	RBM5	100	60.925	Fukomys_damarensis
ENSLBEG00000020858	rbm5	92	97.619	ENSFHEG00000015954	rbm5	100	97.619	Fundulus_heteroclitus
ENSLBEG00000020858	rbm5	90	62.573	ENSGMOG00000007810	-	95	61.696	Gadus_morhua
ENSLBEG00000020858	rbm5	99	73.474	ENSGMOG00000016224	rbm5	100	74.178	Gadus_morhua
ENSLBEG00000020858	rbm5	92	63.454	ENSGALG00000039288	RBM5	83	63.557	Gallus_gallus
ENSLBEG00000020858	rbm5	100	81.914	ENSGAFG00000010690	rbm5	100	82.964	Gambusia_affinis
ENSLBEG00000020858	rbm5	100	63.501	ENSGACG00000000858	-	100	63.261	Gasterosteus_aculeatus
ENSLBEG00000020858	rbm5	100	83.607	ENSGACG00000010469	rbm5	100	83.372	Gasterosteus_aculeatus
ENSLBEG00000020858	rbm5	87	62.483	ENSGAGG00000007935	RBM5	99	61.171	Gopherus_agassizii
ENSLBEG00000020858	rbm5	100	60.859	ENSGGOG00000014490	RBM5	100	60.438	Gorilla_gorilla
ENSLBEG00000020858	rbm5	89	80.488	ENSHBUG00000011901	-	100	80.952	Haplochromis_burtoni
ENSLBEG00000020858	rbm5	100	87.209	ENSHBUG00000001941	rbm5	100	86.163	Haplochromis_burtoni
ENSLBEG00000020858	rbm5	100	61.021	ENSHGLG00000014844	RBM5	100	60.436	Heterocephalus_glaber_female
ENSLBEG00000020858	rbm5	100	61.118	ENSHGLG00100010739	RBM5	100	60.529	Heterocephalus_glaber_male
ENSLBEG00000020858	rbm5	95	77.139	ENSHCOG00000017110	rbm5	99	79.243	Hippocampus_comes
ENSLBEG00000020858	rbm5	100	56.071	ENSHCOG00000004536	-	100	55.899	Hippocampus_comes
ENSLBEG00000020858	rbm5	100	73.605	ENSIPUG00000000640	rbm5	100	73.287	Ictalurus_punctatus
ENSLBEG00000020858	rbm5	100	60.976	ENSSTOG00000013856	RBM5	100	60.554	Ictidomys_tridecemlineatus
ENSLBEG00000020858	rbm5	100	61.324	ENSJJAG00000008844	Rbm5	100	61.015	Jaculus_jaculus
ENSLBEG00000020858	rbm5	100	83.469	ENSKMAG00000006663	rbm5	100	83.469	Kryptolebias_marmoratus
ENSLBEG00000020858	rbm5	99	61.538	ENSLACG00000016572	RBM5	100	65.013	Latimeria_chalumnae
ENSLBEG00000020858	rbm5	100	69.966	ENSLOCG00000010774	rbm5	100	69.476	Lepisosteus_oculatus
ENSLBEG00000020858	rbm5	100	60.743	ENSLAFG00000006733	RBM5	100	60.252	Loxodonta_africana
ENSLBEG00000020858	rbm5	100	60.859	ENSMFAG00000031609	RBM5	100	60.438	Macaca_fascicularis
ENSLBEG00000020858	rbm5	99	60.748	ENSMMUG00000004921	RBM5	99	60.325	Macaca_mulatta
ENSLBEG00000020858	rbm5	100	60.976	ENSMNEG00000044394	RBM5	100	60.554	Macaca_nemestrina
ENSLBEG00000020858	rbm5	100	60.349	ENSMLEG00000034689	RBM5	100	60.046	Mandrillus_leucophaeus
ENSLBEG00000020858	rbm5	91	95.238	ENSMAMG00000017277	rbm5	99	95.238	Mastacembelus_armatus
ENSLBEG00000020858	rbm5	100	66.628	ENSMAMG00000023948	-	100	62.442	Mastacembelus_armatus
ENSLBEG00000020858	rbm5	100	87.719	ENSMZEG00005015328	rbm5	100	86.550	Maylandia_zebra
ENSLBEG00000020858	rbm5	100	61.778	ENSMZEG00005010035	-	100	61.894	Maylandia_zebra
ENSLBEG00000020858	rbm5	97	60.375	ENSMGAG00000003972	RBM5	100	63.875	Meleagris_gallopavo
ENSLBEG00000020858	rbm5	99	60.956	ENSMAUG00000020572	Rbm5	98	60.441	Mesocricetus_auratus
ENSLBEG00000020858	rbm5	100	60.859	ENSMICG00000016179	RBM5	100	60.438	Microcebus_murinus
ENSLBEG00000020858	rbm5	100	60.990	ENSMOCG00000017479	Rbm5	100	60.669	Microtus_ochrogaster
ENSLBEG00000020858	rbm5	97	92.771	ENSMMOG00000015342	rbm5	93	92.771	Mola_mola
ENSLBEG00000020858	rbm5	99	51.171	ENSMMOG00000021804	-	99	52.381	Mola_mola
ENSLBEG00000020858	rbm5	100	60.925	ENSMODG00000012301	RBM5	100	60.345	Monodelphis_domestica
ENSLBEG00000020858	rbm5	99	73.888	ENSMALG00000000609	rbm5	99	73.888	Monopterus_albus
ENSLBEG00000020858	rbm5	100	63.647	ENSMALG00000016769	-	100	63.647	Monopterus_albus
ENSLBEG00000020858	rbm5	100	61.208	ENSMLUG00000007875	RBM5	100	61.085	Myotis_lucifugus
ENSLBEG00000020858	rbm5	100	60.809	ENSNGAG00000011777	Rbm5	100	60.438	Nannospalax_galili
ENSLBEG00000020858	rbm5	98	58.906	ENSNBRG00000004400	RBM5	97	60.864	Neolamprologus_brichardi
ENSLBEG00000020858	rbm5	100	87.442	ENSNBRG00000018097	rbm5	100	86.395	Neolamprologus_brichardi
ENSLBEG00000020858	rbm5	100	60.743	ENSNLEG00000006943	RBM5	100	60.323	Nomascus_leucogenys
ENSLBEG00000020858	rbm5	99	56.440	ENSMEUG00000012994	RBM5	100	56.250	Notamacropus_eugenii
ENSLBEG00000020858	rbm5	92	59.924	ENSOPRG00000015154	RBM5	93	59.301	Ochotona_princeps
ENSLBEG00000020858	rbm5	100	61.279	ENSODEG00000016254	-	100	60.505	Octodon_degus
ENSLBEG00000020858	rbm5	100	58.891	ENSODEG00000019111	-	100	58.228	Octodon_degus
ENSLBEG00000020858	rbm5	100	87.326	ENSONIG00000004107	rbm5	100	86.279	Oreochromis_niloticus
ENSLBEG00000020858	rbm5	100	62.818	ENSONIG00000019007	RBM5	100	62.933	Oreochromis_niloticus
ENSLBEG00000020858	rbm5	91	61.611	ENSOANG00000006557	RBM5	100	60.417	Ornithorhynchus_anatinus
ENSLBEG00000020858	rbm5	100	60.371	ENSOCUG00000011652	RBM5	100	60.069	Oryctolagus_cuniculus
ENSLBEG00000020858	rbm5	100	58.960	ENSORLG00000001053	-	100	57.126	Oryzias_latipes
ENSLBEG00000020858	rbm5	95	82.353	ENSORLG00000003369	rbm5	99	81.740	Oryzias_latipes
ENSLBEG00000020858	rbm5	100	82.710	ENSORLG00020021744	rbm5	100	82.243	Oryzias_latipes_hni
ENSLBEG00000020858	rbm5	96	57.901	ENSORLG00020006782	-	98	55.875	Oryzias_latipes_hni
ENSLBEG00000020858	rbm5	96	57.419	ENSORLG00015002854	-	98	55.875	Oryzias_latipes_hsok
ENSLBEG00000020858	rbm5	91	97.619	ENSORLG00015018379	rbm5	99	97.619	Oryzias_latipes_hsok
ENSLBEG00000020858	rbm5	100	82.614	ENSOMEG00000002219	rbm5	100	81.564	Oryzias_melastigma
ENSLBEG00000020858	rbm5	77	67.708	ENSOMEG00000010653	-	88	66.667	Oryzias_melastigma
ENSLBEG00000020858	rbm5	97	59.343	ENSOGAG00000004205	RBM5	100	60.979	Otolemur_garnettii
ENSLBEG00000020858	rbm5	100	60.976	ENSOARG00000010923	RBM5	100	60.554	Ovis_aries
ENSLBEG00000020858	rbm5	100	60.859	ENSPPAG00000043010	RBM5	100	60.438	Pan_paniscus
ENSLBEG00000020858	rbm5	100	61.092	ENSPPRG00000005404	RBM5	100	60.669	Panthera_pardus
ENSLBEG00000020858	rbm5	100	61.092	ENSPTIG00000000962	RBM5	100	60.669	Panthera_tigris_altaica
ENSLBEG00000020858	rbm5	100	60.859	ENSPTRG00000014946	RBM5	100	60.438	Pan_troglodytes
ENSLBEG00000020858	rbm5	100	60.859	ENSPANG00000018507	RBM5	100	60.438	Papio_anubis
ENSLBEG00000020858	rbm5	82	56.410	ENSPKIG00000019187	-	100	55.988	Paramormyrops_kingsleyae
ENSLBEG00000020858	rbm5	100	68.284	ENSPKIG00000024837	RBM5	100	68.535	Paramormyrops_kingsleyae
ENSLBEG00000020858	rbm5	91	62.923	ENSPSIG00000016073	RBM5	100	62.451	Pelodiscus_sinensis
ENSLBEG00000020858	rbm5	88	82.051	ENSPMGG00000004719	-	96	80.952	Periophthalmus_magnuspinnatus
ENSLBEG00000020858	rbm5	84	63.569	ENSPMGG00000017347	rbm5	100	62.865	Periophthalmus_magnuspinnatus
ENSLBEG00000020858	rbm5	99	44.492	ENSPMAG00000001998	rbm5	99	43.987	Petromyzon_marinus
ENSLBEG00000020858	rbm5	100	60.652	ENSPCIG00000021531	RBM5	100	60.345	Phascolarctos_cinereus
ENSLBEG00000020858	rbm5	100	80.653	ENSPLAG00000006318	rbm5	100	81.702	Poecilia_latipinna
ENSLBEG00000020858	rbm5	79	71.496	ENSPMEG00000008651	rbm5	99	71.429	Poecilia_mexicana
ENSLBEG00000020858	rbm5	100	81.214	ENSPMEG00000004295	rbm5	100	81.564	Poecilia_mexicana
ENSLBEG00000020858	rbm5	100	81.564	ENSPREG00000003795	rbm5	100	82.147	Poecilia_reticulata
ENSLBEG00000020858	rbm5	55	62.389	ENSPCAG00000005459	RBM5	73	62.389	Procavia_capensis
ENSLBEG00000020858	rbm5	100	60.814	ENSPCOG00000025840	RBM5	100	60.554	Propithecus_coquereli
ENSLBEG00000020858	rbm5	100	58.653	ENSPVAG00000006812	RBM5	100	58.276	Pteropus_vampyrus
ENSLBEG00000020858	rbm5	89	63.448	ENSPNYG00000006361	RBM5	99	63.034	Pundamilia_nyererei
ENSLBEG00000020858	rbm5	100	87.326	ENSPNYG00000014787	rbm5	100	86.279	Pundamilia_nyererei
ENSLBEG00000020858	rbm5	100	72.664	ENSPNAG00000012070	rbm5	100	73.519	Pygocentrus_nattereri
ENSLBEG00000020858	rbm5	100	61.208	ENSRBIG00000012679	RBM5	100	60.554	Rhinopithecus_bieti
ENSLBEG00000020858	rbm5	100	61.655	ENSRROG00000041331	RBM5	100	60.905	Rhinopithecus_roxellana
ENSLBEG00000020858	rbm5	100	60.718	ENSSBOG00000006324	RBM5	100	60.438	Saimiri_boliviensis_boliviensis
ENSLBEG00000020858	rbm5	100	60.930	ENSSHAG00000018260	RBM5	100	60.208	Sarcophilus_harrisii
ENSLBEG00000020858	rbm5	100	69.001	ENSSFOG00015019645	-	95	77.568	Scleropages_formosus
ENSLBEG00000020858	rbm5	100	71.757	ENSSFOG00015019052	rbm5	94	72.738	Scleropages_formosus
ENSLBEG00000020858	rbm5	100	85.864	ENSSMAG00000017106	rbm5	100	85.280	Scophthalmus_maximus
ENSLBEG00000020858	rbm5	100	88.435	ENSSDUG00000019775	rbm5	100	89.136	Seriola_dumerili
ENSLBEG00000020858	rbm5	100	88.318	ENSSLDG00000002329	rbm5	100	88.785	Seriola_lalandi_dorsalis
ENSLBEG00000020858	rbm5	100	66.398	ENSSLDG00000015996	-	100	65.938	Seriola_lalandi_dorsalis
ENSLBEG00000020858	rbm5	52	75.641	ENSSARG00000009724	-	63	73.077	Sorex_araneus
ENSLBEG00000020858	rbm5	100	56.821	ENSSPUG00000001876	RBM5	86	60.533	Sphenodon_punctatus
ENSLBEG00000020858	rbm5	100	87.018	ENSSPAG00000019638	rbm5	100	87.485	Stegastes_partitus
ENSLBEG00000020858	rbm5	100	65.665	ENSSPAG00000020011	-	100	65.202	Stegastes_partitus
ENSLBEG00000020858	rbm5	92	73.810	ENSSSCG00000011395	RBM5	100	73.810	Sus_scrofa
ENSLBEG00000020858	rbm5	92	55.930	ENSTGUG00000006417	RBM5	98	59.158	Taeniopygia_guttata
ENSLBEG00000020858	rbm5	100	83.372	ENSTRUG00000008292	rbm5	100	84.987	Takifugu_rubripes
ENSLBEG00000020858	rbm5	99	60.956	ENSTNIG00000014742	rbm5	95	79.273	Tetraodon_nigroviridis
ENSLBEG00000020858	rbm5	100	55.349	ENSTBEG00000005424	RBM5	92	62.319	Tupaia_belangeri
ENSLBEG00000020858	rbm5	92	57.722	ENSTTRG00000007717	RBM5	100	55.734	Tursiops_truncatus
ENSLBEG00000020858	rbm5	100	60.743	ENSUAMG00000028347	RBM5	100	60.323	Ursus_americanus
ENSLBEG00000020858	rbm5	100	60.743	ENSUMAG00000022027	RBM5	100	66.026	Ursus_maritimus
ENSLBEG00000020858	rbm5	90	58.793	ENSVPAG00000009388	RBM5	97	59.031	Vicugna_pacos
ENSLBEG00000020858	rbm5	100	60.859	ENSVVUG00000028647	RBM5	100	60.438	Vulpes_vulpes
ENSLBEG00000020858	rbm5	100	81.797	ENSXMAG00000016369	rbm5	100	82.380	Xiphophorus_maculatus