EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000020887 (Gene tree)
Gene ID: 109995518
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: sal-like protein 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 7375 bases
Position: chrFKLU01000327.1:558152-565526
Accession: 109995518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027551	zf-C2H2	PF00096.26	3.4e-19	1	2
ENSLBEP00000027551	zf-C2H2	PF00096.26	3.4e-19	2	2
ENSLBEP00000027534	zf-C2H2	PF00096.26	5.4e-19	1	2
ENSLBEP00000027534	zf-C2H2	PF00096.26	5.4e-19	2	2
ENSLBEP00000027551	zf-met	PF12874.7	2.3e-09	1	2
ENSLBEP00000027551	zf-met	PF12874.7	2.3e-09	2	2
ENSLBEP00000027534	zf-met	PF12874.7	3.7e-09	1	2
ENSLBEP00000027534	zf-met	PF12874.7	3.7e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000028850	-	5559	XM_020649259	ENSLBEP00000027534	1212 (aa)	XP_020504915	UPI0009B467E2
ENSLBET00000028867	-	3399	-	ENSLBEP00000027551	1132 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000020887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020887	si:ch211-212k18.5	100	75.834	ENSAPOG00000013387	si:ch211-212k18.5	100	76.648	Acanthochromis_polyacanthus
ENSLBEG00000020887	si:ch211-212k18.5	89	67.500	ENSAPOG00000015347	sall2	72	67.500	Acanthochromis_polyacanthus
ENSLBEG00000020887	si:ch211-212k18.5	79	79.098	ENSACIG00000019922	si:ch211-212k18.5	99	80.923	Amphilophus_citrinellus
ENSLBEG00000020887	si:ch211-212k18.5	100	73.899	ENSAOCG00000010737	si:ch211-212k18.5	100	74.715	Amphiprion_ocellaris
ENSLBEG00000020887	si:ch211-212k18.5	69	67.500	ENSAOCG00000016559	sall2	77	64.286	Amphiprion_ocellaris
ENSLBEG00000020887	si:ch211-212k18.5	59	44.197	ENSAPEG00000020215	sall2	71	81.579	Amphiprion_percula
ENSLBEG00000020887	si:ch211-212k18.5	100	73.899	ENSAPEG00000006751	si:ch211-212k18.5	100	74.715	Amphiprion_percula
ENSLBEG00000020887	si:ch211-212k18.5	55	78.947	ENSATEG00000007303	sall2	56	78.947	Anabas_testudineus
ENSLBEG00000020887	si:ch211-212k18.5	84	74.190	ENSATEG00000001254	si:ch211-212k18.5	100	82.961	Anabas_testudineus
ENSLBEG00000020887	si:ch211-212k18.5	57	66.667	ENSACLG00000019867	sall2	62	64.103	Astatotilapia_calliptera
ENSLBEG00000020887	si:ch211-212k18.5	100	71.903	ENSACLG00000009709	si:ch211-212k18.5	100	72.794	Astatotilapia_calliptera
ENSLBEG00000020887	si:ch211-212k18.5	60	49.498	ENSAMXG00000020956	sall2	58	48.864	Astyanax_mexicanus
ENSLBEG00000020887	si:ch211-212k18.5	97	56.351	ENSAMXG00000010979	si:ch211-212k18.5	99	56.763	Astyanax_mexicanus
ENSLBEG00000020887	si:ch211-212k18.5	99	70.665	ENSCSEG00000004426	si:ch211-212k18.5	99	70.641	Cynoglossus_semilaevis
ENSLBEG00000020887	si:ch211-212k18.5	61	78.947	ENSCSEG00000021148	sall2	53	78.947	Cynoglossus_semilaevis
ENSLBEG00000020887	si:ch211-212k18.5	99	69.487	ENSCVAG00000007475	si:ch211-212k18.5	99	70.138	Cyprinodon_variegatus
ENSLBEG00000020887	si:ch211-212k18.5	58	67.647	ENSCVAG00000006032	sall2	55	78.947	Cyprinodon_variegatus
ENSLBEG00000020887	si:ch211-212k18.5	95	57.018	ENSDARG00000103316	si:ch211-212k18.5	95	56.868	Danio_rerio
ENSLBEG00000020887	si:ch211-212k18.5	53	53.004	ENSDARG00000075116	sall2	74	47.979	Danio_rerio
ENSLBEG00000020887	si:ch211-212k18.5	99	56.581	ENSELUG00000024534	si:ch211-212k18.5	97	57.755	Esox_lucius
ENSLBEG00000020887	si:ch211-212k18.5	69	72.727	ENSELUG00000004389	sall2	64	72.727	Esox_lucius
ENSLBEG00000020887	si:ch211-212k18.5	99	69.413	ENSFHEG00000017264	si:ch211-212k18.5	99	69.821	Fundulus_heteroclitus
ENSLBEG00000020887	si:ch211-212k18.5	66	45.006	ENSFHEG00000017550	sall2	60	44.863	Fundulus_heteroclitus
ENSLBEG00000020887	si:ch211-212k18.5	55	75.000	ENSGAFG00000015194	sall2	61	70.588	Gambusia_affinis
ENSLBEG00000020887	si:ch211-212k18.5	99	68.571	ENSGAFG00000003746	si:ch211-212k18.5	100	68.842	Gambusia_affinis
ENSLBEG00000020887	si:ch211-212k18.5	75	66.667	ENSHBUG00000002882	sall2	70	64.103	Haplochromis_burtoni
ENSLBEG00000020887	si:ch211-212k18.5	100	71.660	ENSHBUG00000019672	si:ch211-212k18.5	99	73.684	Haplochromis_burtoni
ENSLBEG00000020887	si:ch211-212k18.5	97	61.616	ENSHCOG00000002842	si:ch211-212k18.5	99	61.092	Hippocampus_comes
ENSLBEG00000020887	si:ch211-212k18.5	99	53.206	ENSIPUG00000002559	sall2	99	53.367	Ictalurus_punctatus
ENSLBEG00000020887	si:ch211-212k18.5	58	71.875	ENSKMAG00000020172	sall2	53	78.947	Kryptolebias_marmoratus
ENSLBEG00000020887	si:ch211-212k18.5	99	69.424	ENSKMAG00000019657	si:ch211-212k18.5	100	70.040	Kryptolebias_marmoratus
ENSLBEG00000020887	si:ch211-212k18.5	72	82.964	ENSMAMG00000015887	si:ch211-212k18.5	99	85.764	Mastacembelus_armatus
ENSLBEG00000020887	si:ch211-212k18.5	54	80.000	ENSMAMG00000016229	sall2	54	80.000	Mastacembelus_armatus
ENSLBEG00000020887	si:ch211-212k18.5	100	71.822	ENSMZEG00005021214	si:ch211-212k18.5	100	72.713	Maylandia_zebra
ENSLBEG00000020887	si:ch211-212k18.5	75	66.667	ENSMZEG00005012103	sall2	70	64.103	Maylandia_zebra
ENSLBEG00000020887	si:ch211-212k18.5	91	82.135	ENSMMOG00000012726	si:ch211-212k18.5	100	82.135	Mola_mola
ENSLBEG00000020887	si:ch211-212k18.5	92	76.161	ENSMALG00000000979	si:ch211-212k18.5	97	76.337	Monopterus_albus
ENSLBEG00000020887	si:ch211-212k18.5	94	41.207	ENSNBRG00000017645	sall2	99	40.416	Neolamprologus_brichardi
ENSLBEG00000020887	si:ch211-212k18.5	95	69.421	ENSNBRG00000023948	si:ch211-212k18.5	98	70.017	Neolamprologus_brichardi
ENSLBEG00000020887	si:ch211-212k18.5	66	44.954	ENSORLG00000026871	sall2	62	79.487	Oryzias_latipes
ENSLBEG00000020887	si:ch211-212k18.5	99	67.214	ENSORLG00000030429	si:ch211-212k18.5	99	67.297	Oryzias_latipes
ENSLBEG00000020887	si:ch211-212k18.5	79	39.876	ENSORLG00020007873	sall2	62	79.487	Oryzias_latipes_hni
ENSLBEG00000020887	si:ch211-212k18.5	99	67.132	ENSORLG00020008145	si:ch211-212k18.5	99	67.543	Oryzias_latipes_hni
ENSLBEG00000020887	si:ch211-212k18.5	99	67.135	ENSORLG00015004982	si:ch211-212k18.5	99	67.298	Oryzias_latipes_hsok
ENSLBEG00000020887	si:ch211-212k18.5	79	39.912	ENSORLG00015002422	sall2	62	79.487	Oryzias_latipes_hsok
ENSLBEG00000020887	si:ch211-212k18.5	100	65.721	ENSOMEG00000013949	si:ch211-212k18.5	100	66.992	Oryzias_melastigma
ENSLBEG00000020887	si:ch211-212k18.5	66	44.841	ENSOMEG00000012904	sall2	64	79.487	Oryzias_melastigma
ENSLBEG00000020887	si:ch211-212k18.5	76	55.668	ENSPKIG00000009207	sall2	69	55.161	Paramormyrops_kingsleyae
ENSLBEG00000020887	si:ch211-212k18.5	94	66.082	ENSPMGG00000018714	si:ch211-212k18.5	99	65.644	Periophthalmus_magnuspinnatus
ENSLBEG00000020887	si:ch211-212k18.5	99	69.389	ENSPFOG00000023705	si:ch211-212k18.5	99	71.304	Poecilia_formosa
ENSLBEG00000020887	si:ch211-212k18.5	57	70.588	ENSPFOG00000016504	sall2	52	76.923	Poecilia_formosa
ENSLBEG00000020887	si:ch211-212k18.5	99	69.250	ENSPLAG00000002577	si:ch211-212k18.5	100	69.519	Poecilia_latipinna
ENSLBEG00000020887	si:ch211-212k18.5	57	70.588	ENSPLAG00000018320	sall2	61	70.588	Poecilia_latipinna
ENSLBEG00000020887	si:ch211-212k18.5	99	69.389	ENSPMEG00000016395	si:ch211-212k18.5	99	71.217	Poecilia_mexicana
ENSLBEG00000020887	si:ch211-212k18.5	57	70.588	ENSPMEG00000006335	sall2	52	76.923	Poecilia_mexicana
ENSLBEG00000020887	si:ch211-212k18.5	99	68.923	ENSPREG00000005292	si:ch211-212k18.5	100	69.112	Poecilia_reticulata
ENSLBEG00000020887	si:ch211-212k18.5	57	70.588	ENSPREG00000021908	sall2	61	70.588	Poecilia_reticulata
ENSLBEG00000020887	si:ch211-212k18.5	100	68.862	ENSPNYG00000021576	si:ch211-212k18.5	100	69.756	Pundamilia_nyererei
ENSLBEG00000020887	si:ch211-212k18.5	94	57.469	ENSPNAG00000006123	si:ch211-212k18.5	94	57.618	Pygocentrus_nattereri
ENSLBEG00000020887	si:ch211-212k18.5	100	75.000	ENSSMAG00000006241	si:ch211-212k18.5	100	74.673	Scophthalmus_maximus
ENSLBEG00000020887	si:ch211-212k18.5	78	48.856	ENSSMAG00000014157	sall2	62	66.667	Scophthalmus_maximus
ENSLBEG00000020887	si:ch211-212k18.5	100	78.554	ENSSDUG00000006164	si:ch211-212k18.5	100	78.798	Seriola_dumerili
ENSLBEG00000020887	si:ch211-212k18.5	79	48.544	ENSSDUG00000012274	sall2	62	66.667	Seriola_dumerili
ENSLBEG00000020887	si:ch211-212k18.5	100	80.016	ENSSLDG00000003393	si:ch211-212k18.5	100	80.260	Seriola_lalandi_dorsalis
ENSLBEG00000020887	si:ch211-212k18.5	79	48.706	ENSSLDG00000001653	sall2	81	45.351	Seriola_lalandi_dorsalis
ENSLBEG00000020887	si:ch211-212k18.5	94	75.868	ENSSPAG00000013435	si:ch211-212k18.5	97	76.042	Stegastes_partitus
ENSLBEG00000020887	si:ch211-212k18.5	52	81.579	ENSSPAG00000023009	sall2	94	38.327	Stegastes_partitus
ENSLBEG00000020887	si:ch211-212k18.5	88	78.231	ENSTRUG00000025082	si:ch211-212k18.5	95	78.114	Takifugu_rubripes
ENSLBEG00000020887	si:ch211-212k18.5	60	46.575	ENSTRUG00000024556	sall2	58	44.249	Takifugu_rubripes
ENSLBEG00000020887	si:ch211-212k18.5	99	66.529	ENSXCOG00000000762	si:ch211-212k18.5	100	67.074	Xiphophorus_couchianus
ENSLBEG00000020887	si:ch211-212k18.5	99	68.673	ENSXMAG00000001461	si:ch211-212k18.5	100	68.786	Xiphophorus_maculatus
ENSLBEG00000020887	si:ch211-212k18.5	57	75.000	ENSXMAG00000000902	sall2	58	46.306	Xiphophorus_maculatus