EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000020994 (Gene tree)
Gene ID: 110003924
Gene Symbol: a1cf
Alias: acf
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12544 bases
Position: chrFKLU01001335.1:4202-16745
Accession: 110003924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027714	DND1_DSRM	PF14709.7	1e-25	1	1
ENSLBEP00000027714	RRM_1	PF00076.22	1.2e-40	1	3
ENSLBEP00000027714	RRM_1	PF00076.22	1.2e-40	2	3
ENSLBEP00000027714	RRM_1	PF00076.22	1.2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029037	-	3853	XM_020659483	ENSLBEP00000027714	617 (aa)	XP_020515139	-

Gene Model

Click here to download ENSLBEG00000020994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000020994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000020994	a1cf	87	51.955	ENSLBEG00000008436	rbm47	78	50.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000020994	a1cf	98	76.847	ENSG00000148584	A1CF	100	88.614	Homo_sapiens
ENSLBEG00000020994	a1cf	99	85.714	ENSAPOG00000008259	a1cf	99	85.920	Acanthochromis_polyacanthus
ENSLBEG00000020994	a1cf	98	75.947	ENSAMEG00000000523	A1CF	99	75.123	Ailuropoda_melanoleuca
ENSLBEG00000020994	a1cf	99	86.179	ENSACIG00000008632	a1cf	99	87.967	Amphilophus_citrinellus
ENSLBEG00000020994	a1cf	99	87.234	ENSAOCG00000023744	a1cf	97	90.883	Amphiprion_ocellaris
ENSLBEG00000020994	a1cf	99	88.380	ENSAPEG00000009537	a1cf	99	89.198	Amphiprion_percula
ENSLBEG00000020994	a1cf	99	89.689	ENSATEG00000013720	a1cf	99	89.689	Anabas_testudineus
ENSLBEG00000020994	a1cf	99	76.268	ENSAPLG00000002964	A1CF	99	74.959	Anas_platyrhynchos
ENSLBEG00000020994	a1cf	99	75.941	ENSACAG00000015269	A1CF	99	75.123	Anolis_carolinensis
ENSLBEG00000020994	a1cf	98	76.480	ENSANAG00000019974	A1CF	99	74.837	Aotus_nancymaae
ENSLBEG00000020994	a1cf	99	84.967	ENSACLG00000017428	a1cf	99	86.111	Astatotilapia_calliptera
ENSLBEG00000020994	a1cf	98	76.710	ENSAMXG00000018180	a1cf	99	76.052	Astyanax_mexicanus
ENSLBEG00000020994	a1cf	98	75.698	ENSBTAG00000021195	A1CF	99	74.790	Bos_taurus
ENSLBEG00000020994	a1cf	98	77.467	ENSCJAG00000005045	A1CF	99	75.817	Callithrix_jacchus
ENSLBEG00000020994	a1cf	98	76.277	ENSCAFG00000015581	A1CF	99	74.632	Canis_familiaris
ENSLBEG00000020994	a1cf	98	76.277	ENSCAFG00020026421	A1CF	98	79.868	Canis_lupus_dingo
ENSLBEG00000020994	a1cf	98	77.340	ENSCHIG00000020411	A1CF	99	75.856	Capra_hircus
ENSLBEG00000020994	a1cf	96	74.247	ENSTSYG00000001755	A1CF	99	74.350	Carlito_syrichta
ENSLBEG00000020994	a1cf	98	74.344	ENSCAPG00000017386	A1CF	98	76.038	Cavia_aperea
ENSLBEG00000020994	a1cf	98	75.987	ENSCPOG00000009807	A1CF	99	74.510	Cavia_porcellus
ENSLBEG00000020994	a1cf	98	77.265	ENSCCAG00000018168	A1CF	99	75.777	Cebus_capucinus
ENSLBEG00000020994	a1cf	98	75.947	ENSCATG00000043715	A1CF	99	74.141	Cercocebus_atys
ENSLBEG00000020994	a1cf	98	76.026	ENSCLAG00000010424	A1CF	99	74.715	Chinchilla_lanigera
ENSLBEG00000020994	a1cf	98	77.265	ENSCSAG00000007032	A1CF	99	75.450	Chlorocebus_sabaeus
ENSLBEG00000020994	a1cf	96	72.803	ENSCHOG00000009089	A1CF	98	71.334	Choloepus_hoffmanni
ENSLBEG00000020994	a1cf	99	77.414	ENSCPBG00000026464	A1CF	99	75.777	Chrysemys_picta_bellii
ENSLBEG00000020994	a1cf	98	77.100	ENSCANG00000038032	A1CF	99	75.286	Colobus_angolensis_palliatus
ENSLBEG00000020994	a1cf	98	75.534	ENSCGRG00001017413	A1cf	99	74.384	Cricetulus_griseus_chok1gshd
ENSLBEG00000020994	a1cf	98	76.026	ENSCGRG00000017332	A1cf	99	74.713	Cricetulus_griseus_crigri
ENSLBEG00000020994	a1cf	99	85.854	ENSCSEG00000002361	a1cf	99	85.622	Cynoglossus_semilaevis
ENSLBEG00000020994	a1cf	99	88.216	ENSCVAG00000010520	a1cf	99	88.216	Cyprinodon_variegatus
ENSLBEG00000020994	a1cf	98	81.219	ENSDARG00000002968	a1cf	99	80.687	Danio_rerio
ENSLBEG00000020994	a1cf	98	76.026	ENSDNOG00000002829	A1CF	99	74.551	Dasypus_novemcinctus
ENSLBEG00000020994	a1cf	79	85.145	ENSETEG00000012527	A1CF	80	85.145	Echinops_telfairi
ENSLBEG00000020994	a1cf	98	76.268	ENSEASG00005012924	A1CF	99	74.797	Equus_asinus_asinus
ENSLBEG00000020994	a1cf	98	75.777	ENSECAG00000010424	A1CF	99	74.309	Equus_caballus
ENSLBEG00000020994	a1cf	78	65.839	ENSEEUG00000000013	A1CF	96	64.819	Erinaceus_europaeus
ENSLBEG00000020994	a1cf	98	83.690	ENSELUG00000003159	a1cf	99	82.815	Esox_lucius
ENSLBEG00000020994	a1cf	98	74.629	ENSFCAG00000011179	A1CF	99	73.806	Felis_catus
ENSLBEG00000020994	a1cf	99	76.268	ENSFALG00000013183	A1CF	99	74.632	Ficedula_albicollis
ENSLBEG00000020994	a1cf	98	75.205	ENSFDAG00000019371	A1CF	99	73.736	Fukomys_damarensis
ENSLBEG00000020994	a1cf	99	81.997	ENSFHEG00000019652	a1cf	96	89.844	Fundulus_heteroclitus
ENSLBEG00000020994	a1cf	99	80.556	ENSGMOG00000018943	a1cf	99	78.922	Gadus_morhua
ENSLBEG00000020994	a1cf	94	76.592	ENSGALG00000003765	A1CF	96	74.871	Gallus_gallus
ENSLBEG00000020994	a1cf	99	81.433	ENSGAFG00000014868	a1cf	99	81.596	Gambusia_affinis
ENSLBEG00000020994	a1cf	99	88.436	ENSGACG00000010241	a1cf	99	88.274	Gasterosteus_aculeatus
ENSLBEG00000020994	a1cf	95	76.451	ENSGAGG00000016508	A1CF	97	74.744	Gopherus_agassizii
ENSLBEG00000020994	a1cf	98	76.847	ENSGGOG00000009670	A1CF	99	75.163	Gorilla_gorilla
ENSLBEG00000020994	a1cf	99	87.480	ENSHBUG00000021959	a1cf	99	88.618	Haplochromis_burtoni
ENSLBEG00000020994	a1cf	98	76.190	ENSHGLG00000008955	A1CF	99	74.715	Heterocephalus_glaber_female
ENSLBEG00000020994	a1cf	98	75.534	ENSHGLG00100000518	A1CF	99	74.062	Heterocephalus_glaber_male
ENSLBEG00000020994	a1cf	94	77.119	ENSHCOG00000017669	a1cf	99	77.346	Hippocampus_comes
ENSLBEG00000020994	a1cf	89	85.246	ENSIPUG00000010367	a1cf	95	84.854	Ictalurus_punctatus
ENSLBEG00000020994	a1cf	99	88.817	ENSKMAG00000006568	a1cf	99	88.331	Kryptolebias_marmoratus
ENSLBEG00000020994	a1cf	98	78.583	ENSLACG00000008061	A1CF	99	77.100	Latimeria_chalumnae
ENSLBEG00000020994	a1cf	98	82.372	ENSLOCG00000006302	a1cf	99	80.851	Lepisosteus_oculatus
ENSLBEG00000020994	a1cf	98	76.519	ENSLAFG00000015462	A1CF	99	76.835	Loxodonta_africana
ENSLBEG00000020994	a1cf	98	75.947	ENSMFAG00000035948	A1CF	99	74.141	Macaca_fascicularis
ENSLBEG00000020994	a1cf	98	75.947	ENSMMUG00000007077	A1CF	99	74.141	Macaca_mulatta
ENSLBEG00000020994	a1cf	98	75.783	ENSMNEG00000031454	A1CF	99	73.977	Macaca_nemestrina
ENSLBEG00000020994	a1cf	98	77.100	ENSMLEG00000037223	A1CF	99	75.286	Mandrillus_leucophaeus
ENSLBEG00000020994	a1cf	99	87.805	ENSMAMG00000010402	a1cf	99	87.642	Mastacembelus_armatus
ENSLBEG00000020994	a1cf	99	87.725	ENSMZEG00005013245	a1cf	99	87.561	Maylandia_zebra
ENSLBEG00000020994	a1cf	99	76.307	ENSMGAG00000001507	A1CF	99	74.673	Meleagris_gallopavo
ENSLBEG00000020994	a1cf	98	75.534	ENSMAUG00000007422	A1cf	99	74.384	Mesocricetus_auratus
ENSLBEG00000020994	a1cf	98	74.837	ENSMICG00000003377	A1CF	99	75.000	Microcebus_murinus
ENSLBEG00000020994	a1cf	98	76.190	ENSMOCG00000021536	A1cf	99	74.877	Microtus_ochrogaster
ENSLBEG00000020994	a1cf	99	78.723	ENSMMOG00000009422	a1cf	99	77.741	Mola_mola
ENSLBEG00000020994	a1cf	92	75.575	ENSMODG00000016478	A1CF	97	76.095	Monodelphis_domestica
ENSLBEG00000020994	a1cf	99	79.675	ENSMALG00000012992	a1cf	99	80.033	Monopterus_albus
ENSLBEG00000020994	a1cf	98	75.534	MGP_CAROLIEiJ_G0022873	A1cf	99	74.220	Mus_caroli
ENSLBEG00000020994	a1cf	98	75.534	ENSMUSG00000052595	A1cf	99	79.897	Mus_musculus
ENSLBEG00000020994	a1cf	98	75.534	MGP_PahariEiJ_G0014366	A1cf	99	73.563	Mus_pahari
ENSLBEG00000020994	a1cf	98	75.534	MGP_SPRETEiJ_G0023792	A1cf	99	74.056	Mus_spretus
ENSLBEG00000020994	a1cf	98	71.664	ENSMPUG00000016971	A1CF	99	70.540	Mustela_putorius_furo
ENSLBEG00000020994	a1cf	98	76.847	ENSMLUG00000016071	A1CF	99	75.369	Myotis_lucifugus
ENSLBEG00000020994	a1cf	98	76.026	ENSNGAG00000015136	A1cf	99	74.551	Nannospalax_galili
ENSLBEG00000020994	a1cf	99	87.317	ENSNBRG00000001712	a1cf	99	88.455	Neolamprologus_brichardi
ENSLBEG00000020994	a1cf	98	77.011	ENSNLEG00000012028	A1CF	99	75.530	Nomascus_leucogenys
ENSLBEG00000020994	a1cf	93	75.567	ENSMEUG00000015909	A1CF	99	73.657	Notamacropus_eugenii
ENSLBEG00000020994	a1cf	88	69.358	ENSOPRG00000010667	A1CF	97	68.066	Ochotona_princeps
ENSLBEG00000020994	a1cf	99	88.130	ENSONIG00000019105	a1cf	99	88.780	Oreochromis_niloticus
ENSLBEG00000020994	a1cf	79	75.359	ENSOANG00000007360	A1CF	99	74.743	Ornithorhynchus_anatinus
ENSLBEG00000020994	a1cf	98	74.754	ENSOCUG00000011587	A1CF	99	73.607	Oryctolagus_cuniculus
ENSLBEG00000020994	a1cf	99	85.106	ENSORLG00000013342	a1cf	99	84.288	Oryzias_latipes
ENSLBEG00000020994	a1cf	99	87.418	ENSORLG00020000586	a1cf	99	86.928	Oryzias_latipes_hni
ENSLBEG00000020994	a1cf	99	87.418	ENSORLG00015018569	a1cf	99	86.928	Oryzias_latipes_hsok
ENSLBEG00000020994	a1cf	99	85.993	ENSOMEG00000013531	a1cf	99	85.016	Oryzias_melastigma
ENSLBEG00000020994	a1cf	98	76.112	ENSOGAG00000012884	A1CF	99	76.606	Otolemur_garnettii
ENSLBEG00000020994	a1cf	98	77.011	ENSOARG00000013695	A1CF	99	75.530	Ovis_aries
ENSLBEG00000020994	a1cf	95	75.296	ENSPPAG00000028115	A1CF	99	78.794	Pan_paniscus
ENSLBEG00000020994	a1cf	98	75.783	ENSPPRG00000012180	A1CF	99	74.795	Panthera_pardus
ENSLBEG00000020994	a1cf	98	75.783	ENSPTIG00000021223	A1CF	99	74.795	Panthera_tigris_altaica
ENSLBEG00000020994	a1cf	98	76.847	ENSPTRG00000002508	A1CF	99	75.163	Pan_troglodytes
ENSLBEG00000020994	a1cf	98	75.947	ENSPANG00000021988	A1CF	99	74.141	Papio_anubis
ENSLBEG00000020994	a1cf	98	82.372	ENSPKIG00000025176	a1cf	99	81.669	Paramormyrops_kingsleyae
ENSLBEG00000020994	a1cf	99	76.471	ENSPSIG00000010318	A1CF	99	74.304	Pelodiscus_sinensis
ENSLBEG00000020994	a1cf	98	70.248	ENSPMGG00000013359	a1cf	99	70.627	Periophthalmus_magnuspinnatus
ENSLBEG00000020994	a1cf	98	76.355	ENSPEMG00000015021	A1cf	99	74.713	Peromyscus_maniculatus_bairdii
ENSLBEG00000020994	a1cf	98	74.959	ENSPCIG00000002175	A1CF	99	75.123	Phascolarctos_cinereus
ENSLBEG00000020994	a1cf	99	89.414	ENSPFOG00000007437	-	99	89.577	Poecilia_formosa
ENSLBEG00000020994	a1cf	99	89.414	ENSPFOG00000006683	a1cf	99	89.577	Poecilia_formosa
ENSLBEG00000020994	a1cf	99	87.948	ENSPLAG00000001210	-	99	88.111	Poecilia_latipinna
ENSLBEG00000020994	a1cf	99	87.948	ENSPLAG00000000026	a1cf	99	88.111	Poecilia_latipinna
ENSLBEG00000020994	a1cf	99	79.479	ENSPMEG00000000921	a1cf	99	79.642	Poecilia_mexicana
ENSLBEG00000020994	a1cf	99	80.782	ENSPMEG00000015529	-	99	80.945	Poecilia_mexicana
ENSLBEG00000020994	a1cf	99	89.902	ENSPREG00000016298	a1cf	99	89.902	Poecilia_reticulata
ENSLBEG00000020994	a1cf	98	75.862	ENSPPYG00000002819	A1CF	99	74.388	Pongo_abelii
ENSLBEG00000020994	a1cf	78	59.381	ENSPCAG00000006463	A1CF	78	58.896	Procavia_capensis
ENSLBEG00000020994	a1cf	98	75.738	ENSPCOG00000024172	A1CF	99	75.896	Propithecus_coquereli
ENSLBEG00000020994	a1cf	99	89.106	ENSPNYG00000017944	a1cf	99	90.244	Pundamilia_nyererei
ENSLBEG00000020994	a1cf	98	82.680	ENSPNAG00000007704	a1cf	99	82.305	Pygocentrus_nattereri
ENSLBEG00000020994	a1cf	98	74.713	ENSRNOG00000033195	A1cf	99	73.399	Rattus_norvegicus
ENSLBEG00000020994	a1cf	98	71.757	ENSRBIG00000042892	A1CF	99	71.673	Rhinopithecus_bieti
ENSLBEG00000020994	a1cf	98	77.100	ENSRROG00000041398	A1CF	99	75.286	Rhinopithecus_roxellana
ENSLBEG00000020994	a1cf	98	77.504	ENSSBOG00000021930	A1CF	99	75.693	Saimiri_boliviensis_boliviensis
ENSLBEG00000020994	a1cf	98	76.277	ENSSHAG00000005096	A1CF	99	74.795	Sarcophilus_harrisii
ENSLBEG00000020994	a1cf	98	81.863	ENSSFOG00015011774	a1cf	99	81.656	Scleropages_formosus
ENSLBEG00000020994	a1cf	99	89.610	ENSSMAG00000013271	a1cf	99	89.123	Scophthalmus_maximus
ENSLBEG00000020994	a1cf	99	89.034	ENSSDUG00000013930	a1cf	99	88.871	Seriola_dumerili
ENSLBEG00000020994	a1cf	99	79.869	ENSSLDG00000004290	a1cf	99	79.869	Seriola_lalandi_dorsalis
ENSLBEG00000020994	a1cf	93	67.474	ENSSARG00000005940	A1CF	95	66.667	Sorex_araneus
ENSLBEG00000020994	a1cf	94	75.601	ENSSPUG00000006797	A1CF	94	73.883	Sphenodon_punctatus
ENSLBEG00000020994	a1cf	98	77.504	ENSSSCG00000010431	A1CF	99	76.020	Sus_scrofa
ENSLBEG00000020994	a1cf	99	77.398	ENSTGUG00000005090	A1CF	99	75.772	Taeniopygia_guttata
ENSLBEG00000020994	a1cf	99	87.948	ENSTRUG00000001982	a1cf	99	86.482	Takifugu_rubripes
ENSLBEG00000020994	a1cf	99	87.967	ENSTNIG00000003580	a1cf	99	87.805	Tetraodon_nigroviridis
ENSLBEG00000020994	a1cf	96	70.370	ENSTTRG00000013190	A1CF	95	69.024	Tursiops_truncatus
ENSLBEG00000020994	a1cf	98	75.124	ENSUAMG00000020065	A1CF	99	73.970	Ursus_americanus
ENSLBEG00000020994	a1cf	98	75.947	ENSUMAG00000011162	A1CF	99	74.629	Ursus_maritimus
ENSLBEG00000020994	a1cf	86	73.034	ENSVPAG00000006130	A1CF	85	71.375	Vicugna_pacos
ENSLBEG00000020994	a1cf	98	75.288	ENSVVUG00000002504	A1CF	99	73.650	Vulpes_vulpes
ENSLBEG00000020994	a1cf	98	71.664	ENSXETG00000006611	a1cf	99	71.031	Xenopus_tropicalis
ENSLBEG00000020994	a1cf	99	88.274	ENSXCOG00000003302	a1cf	99	88.436	Xiphophorus_couchianus
ENSLBEG00000020994	a1cf	99	89.577	ENSXMAG00000016703	a1cf	99	89.739	Xiphophorus_maculatus