EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021088 (Gene tree)
Gene ID: 110002620
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC110002620
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 11873 bases
Position: chrFKLU01000994.1:65083-76955
Accession: 110002620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027839	RRM_1	PF00076.22	9.3e-11	1	1
ENSLBEP00000027807	RRM_1	PF00076.22	9.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029133	-	3398	XM_020658264	ENSLBEP00000027807	640 (aa)	XP_020513920	UPI0009B3236E
ENSLBET00000029167	-	3314	XM_020658266	ENSLBEP00000027839	612 (aa)	XP_020513922	-

Gene Model

Click here to download ENSLBEG00000021088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021088	-	80	33.712	ENSLBEG00000028046	-	51	40.541
ENSLBEG00000021088	-	54	32.222	ENSLBEG00000023984	zgc:123010	59	32.222
ENSLBEG00000021088	-	93	99.330	ENSLBEG00000017203	-	99	99.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021088	-	99	57.704	ENSAPOG00000005058	si:dkey-33c12.4	99	57.704	Acanthochromis_polyacanthus
ENSLBEG00000021088	-	52	39.130	ENSAPOG00000022403	-	56	38.070	Acanthochromis_polyacanthus
ENSLBEG00000021088	-	54	31.944	ENSAPOG00000019633	zgc:123010	59	31.405	Acanthochromis_polyacanthus
ENSLBEG00000021088	-	97	60.502	ENSAOCG00000020066	si:dkey-33c12.4	95	60.410	Amphiprion_ocellaris
ENSLBEG00000021088	-	54	31.944	ENSAOCG00000005910	zgc:123010	59	31.405	Amphiprion_ocellaris
ENSLBEG00000021088	-	52	39.003	ENSAOCG00000000431	-	55	38.504	Amphiprion_ocellaris
ENSLBEG00000021088	-	54	31.944	ENSAPEG00000014305	zgc:123010	62	31.667	Amphiprion_percula
ENSLBEG00000021088	-	52	39.296	ENSAPEG00000023603	-	55	38.965	Amphiprion_percula
ENSLBEG00000021088	-	50	40.938	ENSATEG00000018302	-	57	39.071	Anabas_testudineus
ENSLBEG00000021088	-	55	31.680	ENSATEG00000001220	zgc:123010	59	32.514	Anabas_testudineus
ENSLBEG00000021088	-	100	58.769	ENSATEG00000018885	si:dkey-33c12.4	100	58.154	Anabas_testudineus
ENSLBEG00000021088	-	52	38.835	ENSATEG00000022160	-	57	44.366	Anabas_testudineus
ENSLBEG00000021088	-	50	39.385	ENSACLG00000003019	-	60	38.544	Astatotilapia_calliptera
ENSLBEG00000021088	-	99	56.627	ENSACLG00000014192	si:dkey-33c12.4	99	54.758	Astatotilapia_calliptera
ENSLBEG00000021088	-	52	30.919	ENSACLG00000010188	zgc:123010	60	30.919	Astatotilapia_calliptera
ENSLBEG00000021088	-	64	30.170	ENSAMXG00000041967	zgc:123010	53	45.205	Astyanax_mexicanus
ENSLBEG00000021088	-	97	37.444	ENSAMXG00000010871	si:dkey-33c12.4	60	42.786	Astyanax_mexicanus
ENSLBEG00000021088	-	83	32.570	ENSCPBG00000024454	-	55	34.761	Chrysemys_picta_bellii
ENSLBEG00000021088	-	53	38.043	ENSCSEG00000002755	-	61	39.489	Cynoglossus_semilaevis
ENSLBEG00000021088	-	99	54.294	ENSCVAG00000006564	-	99	51.783	Cyprinodon_variegatus
ENSLBEG00000021088	-	55	31.044	ENSCVAG00000013288	zgc:123010	60	30.769	Cyprinodon_variegatus
ENSLBEG00000021088	-	54	37.795	ENSCVAG00000004187	-	60	37.270	Cyprinodon_variegatus
ENSLBEG00000021088	-	96	34.750	ENSDARG00000057890	si:dkey-33c12.4	60	40.500	Danio_rerio
ENSLBEG00000021088	-	51	37.811	ENSDARG00000039082	zgc:123010	59	43.333	Danio_rerio
ENSLBEG00000021088	-	96	39.046	ENSELUG00000002009	si:dkey-33c12.4	97	35.874	Esox_lucius
ENSLBEG00000021088	-	81	34.679	ENSELUG00000001633	-	55	40.278	Esox_lucius
ENSLBEG00000021088	-	54	30.447	ENSELUG00000021447	-	60	30.447	Esox_lucius
ENSLBEG00000021088	-	54	31.755	ENSELUG00000022008	zgc:123010	71	42.604	Esox_lucius
ENSLBEG00000021088	-	65	30.332	ENSFHEG00000002306	zgc:123010	59	31.319	Fundulus_heteroclitus
ENSLBEG00000021088	-	62	36.990	ENSFHEG00000009983	-	52	41.401	Fundulus_heteroclitus
ENSLBEG00000021088	-	99	57.604	ENSFHEG00000005521	si:dkey-33c12.4	99	54.658	Fundulus_heteroclitus
ENSLBEG00000021088	-	52	36.335	ENSGALG00000036747	TTC31	55	36.335	Gallus_gallus
ENSLBEG00000021088	-	67	31.481	ENSGAFG00000009373	zgc:123010	54	41.558	Gambusia_affinis
ENSLBEG00000021088	-	50	39.701	ENSGAFG00000016594	-	50	39.701	Gambusia_affinis
ENSLBEG00000021088	-	99	55.352	ENSGAFG00000017596	si:dkey-33c12.4	99	55.352	Gambusia_affinis
ENSLBEG00000021088	-	59	59.677	ENSGACG00000004936	-	98	59.677	Gasterosteus_aculeatus
ENSLBEG00000021088	-	64	30.476	ENSGACG00000007620	zgc:123010	81	31.680	Gasterosteus_aculeatus
ENSLBEG00000021088	-	99	56.970	ENSHBUG00000010735	si:dkey-33c12.4	99	56.061	Haplochromis_burtoni
ENSLBEG00000021088	-	97	36.842	ENSIPUG00000005998	si:dkey-33c12.4	67	40.308	Ictalurus_punctatus
ENSLBEG00000021088	-	55	32.055	ENSKMAG00000021350	zgc:123010	60	31.781	Kryptolebias_marmoratus
ENSLBEG00000021088	-	99	56.375	ENSKMAG00000016610	si:dkey-33c12.4	99	55.115	Kryptolebias_marmoratus
ENSLBEG00000021088	-	71	32.762	ENSKMAG00000006468	-	56	39.045	Kryptolebias_marmoratus
ENSLBEG00000021088	-	53	35.920	ENSLACG00000004602	-	58	35.838	Latimeria_chalumnae
ENSLBEG00000021088	-	83	36.222	ENSLOCG00000001861	-	90	32.686	Lepisosteus_oculatus
ENSLBEG00000021088	-	54	38.649	ENSMAMG00000004311	-	70	36.195	Mastacembelus_armatus
ENSLBEG00000021088	-	100	62.614	ENSMAMG00000000111	si:dkey-33c12.4	100	62.158	Mastacembelus_armatus
ENSLBEG00000021088	-	54	30.986	ENSMAMG00000001145	zgc:123010	72	30.986	Mastacembelus_armatus
ENSLBEG00000021088	-	54	36.757	ENSMZEG00005000585	-	60	38.814	Maylandia_zebra
ENSLBEG00000021088	-	99	56.732	ENSMZEG00005014276	si:dkey-33c12.4	99	55.825	Maylandia_zebra
ENSLBEG00000021088	-	52	30.919	ENSMZEG00005027733	zgc:123010	60	30.919	Maylandia_zebra
ENSLBEG00000021088	-	55	32.055	ENSMALG00000017698	zgc:123010	59	31.793	Monopterus_albus
ENSLBEG00000021088	-	100	60.883	ENSMALG00000002265	si:dkey-33c12.4	100	60.731	Monopterus_albus
ENSLBEG00000021088	-	58	39.257	ENSMALG00000003167	-	57	39.418	Monopterus_albus
ENSLBEG00000021088	-	52	30.286	ENSONIG00000000297	-	97	30.286	Oreochromis_niloticus
ENSLBEG00000021088	-	52	37.830	ENSONIG00000007538	-	86	55.556	Oreochromis_niloticus
ENSLBEG00000021088	-	57	56.198	ENSONIG00000012263	-	100	53.495	Oreochromis_niloticus
ENSLBEG00000021088	-	99	50.155	ENSORLG00000029651	si:dkey-33c12.4	98	49.689	Oryzias_latipes
ENSLBEG00000021088	-	54	38.527	ENSORLG00000030385	-	56	38.592	Oryzias_latipes
ENSLBEG00000021088	-	99	49.327	ENSORLG00020008750	si:dkey-33c12.4	98	48.281	Oryzias_latipes_hni
ENSLBEG00000021088	-	79	33.523	ENSORLG00015008400	-	56	39.155	Oryzias_latipes_hsok
ENSLBEG00000021088	-	55	31.680	ENSORLG00015008373	zgc:123010	60	30.601	Oryzias_latipes_hsok
ENSLBEG00000021088	-	99	49.926	ENSOMEG00000008913	-	99	49.112	Oryzias_melastigma
ENSLBEG00000021088	-	55	31.956	ENSOMEG00000003408	zgc:123010	60	31.148	Oryzias_melastigma
ENSLBEG00000021088	-	88	35.774	ENSPKIG00000011819	-	52	42.017	Paramormyrops_kingsleyae
ENSLBEG00000021088	-	50	35.749	ENSPMGG00000020251	zgc:123010	66	40.252	Periophthalmus_magnuspinnatus
ENSLBEG00000021088	-	72	34.280	ENSPFOG00000017092	-	76	37.143	Poecilia_formosa
ENSLBEG00000021088	-	53	31.044	ENSPFOG00000001073	zgc:123010	60	30.769	Poecilia_formosa
ENSLBEG00000021088	-	99	54.587	ENSPFOG00000009143	si:dkey-33c12.4	99	55.030	Poecilia_formosa
ENSLBEG00000021088	-	55	31.044	ENSPLAG00000007711	zgc:123010	60	30.769	Poecilia_latipinna
ENSLBEG00000021088	-	95	55.259	ENSPLAG00000022537	si:dkey-33c12.4	99	55.309	Poecilia_latipinna
ENSLBEG00000021088	-	99	54.128	ENSPMEG00000015590	si:dkey-33c12.4	99	54.726	Poecilia_mexicana
ENSLBEG00000021088	-	50	39.941	ENSPMEG00000009905	-	59	37.403	Poecilia_mexicana
ENSLBEG00000021088	-	55	31.044	ENSPMEG00000005092	zgc:123010	60	30.769	Poecilia_mexicana
ENSLBEG00000021088	-	50	39.706	ENSPREG00000016861	-	52	39.881	Poecilia_reticulata
ENSLBEG00000021088	-	58	37.736	ENSPNYG00000001047	-	60	38.814	Pundamilia_nyererei
ENSLBEG00000021088	-	52	30.641	ENSPNYG00000007893	zgc:123010	55	42.759	Pundamilia_nyererei
ENSLBEG00000021088	-	99	56.884	ENSPNYG00000018262	si:dkey-33c12.4	99	55.976	Pundamilia_nyererei
ENSLBEG00000021088	-	97	35.608	ENSPNAG00000018386	si:dkey-33c12.4	61	41.481	Pygocentrus_nattereri
ENSLBEG00000021088	-	86	35.417	ENSSFOG00015009199	-	62	38.200	Scleropages_formosus
ENSLBEG00000021088	-	86	35.243	ENSSFOG00015005186	-	58	41.444	Scleropages_formosus
ENSLBEG00000021088	-	99	59.524	ENSSMAG00000008147	si:dkey-33c12.4	99	59.314	Scophthalmus_maximus
ENSLBEG00000021088	-	67	30.000	ENSSMAG00000021096	-	80	30.000	Scophthalmus_maximus
ENSLBEG00000021088	-	68	31.696	ENSSMAG00000002904	zgc:123010	63	31.956	Scophthalmus_maximus
ENSLBEG00000021088	-	54	40.058	ENSSMAG00000010960	-	58	39.130	Scophthalmus_maximus
ENSLBEG00000021088	-	100	62.256	ENSSDUG00000003213	si:dkey-33c12.4	100	62.064	Seriola_dumerili
ENSLBEG00000021088	-	50	42.249	ENSSDUG00000010976	-	52	42.368	Seriola_dumerili
ENSLBEG00000021088	-	54	33.056	ENSSDUG00000008651	zgc:123010	58	31.956	Seriola_dumerili
ENSLBEG00000021088	-	58	39.572	ENSSLDG00000012846	-	61	40.164	Seriola_lalandi_dorsalis
ENSLBEG00000021088	-	54	33.056	ENSSLDG00000019386	zgc:123010	61	31.956	Seriola_lalandi_dorsalis
ENSLBEG00000021088	-	100	62.256	ENSSLDG00000009448	si:dkey-33c12.4	100	62.367	Seriola_lalandi_dorsalis
ENSLBEG00000021088	-	54	32.500	ENSSPAG00000013621	zgc:123010	59	31.421	Stegastes_partitus
ENSLBEG00000021088	-	99	58.955	ENSSPAG00000022577	-	99	58.673	Stegastes_partitus
ENSLBEG00000021088	-	53	38.123	ENSSPAG00000004843	-	56	37.067	Stegastes_partitus
ENSLBEG00000021088	-	55	36.391	ENSTRUG00000000057	-	54	36.391	Takifugu_rubripes
ENSLBEG00000021088	-	54	31.111	ENSTRUG00000024824	zgc:123010	60	31.389	Takifugu_rubripes
ENSLBEG00000021088	-	58	60.111	ENSTRUG00000022374	si:dkey-33c12.4	91	48.362	Takifugu_rubripes
ENSLBEG00000021088	-	54	55.556	ENSTNIG00000010542	-	99	51.111	Tetraodon_nigroviridis
ENSLBEG00000021088	-	54	30.226	ENSTNIG00000001303	zgc:123010	90	30.226	Tetraodon_nigroviridis
ENSLBEG00000021088	-	54	31.653	ENSXCOG00000012281	zgc:123010	72	31.653	Xiphophorus_couchianus
ENSLBEG00000021088	-	99	56.098	ENSXMAG00000018535	si:dkey-33c12.4	99	55.793	Xiphophorus_maculatus
ENSLBEG00000021088	-	55	31.044	ENSXMAG00000002598	zgc:123010	60	30.769	Xiphophorus_maculatus