EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021140 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ESF1 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 745 bases
Position: chrFKLU01007118.1:6495-7239
Accession: 109978669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000027891	NUC153	PF08159.12	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029221	-	409	XM_020627935	ENSLBEP00000027891	136 (aa)	XP_020483591	-

Gene Model

Click here to download ENSLBEG00000021140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021140	-	70	84.211	ENSLBEG00000016183	-	66	84.211
ENSLBEG00000021140	-	95	86.047	ENSLBEG00000003471	-	83	85.385
ENSLBEG00000021140	-	95	86.047	ENSLBEG00000001908	-	83	85.385
ENSLBEG00000021140	-	95	86.047	ENSLBEG00000005609	-	83	85.385
ENSLBEG00000021140	-	95	86.047	ENSLBEG00000007885	-	83	85.385
ENSLBEG00000021140	-	95	71.318	ENSLBEG00000007144	-	80	68.462
ENSLBEG00000021140	-	95	86.047	ENSLBEG00000015261	-	83	85.385
ENSLBEG00000021140	-	95	86.047	ENSLBEG00000007524	-	83	85.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021140	-	78	50.000	ENSCPOG00000034000	-	81	49.612	Cavia_porcellus
ENSLBEG00000021140	-	95	55.814	ENSCPBG00000023302	-	83	55.385	Chrysemys_picta_bellii
ENSLBEG00000021140	-	78	50.000	ENSCGRG00000002170	-	82	52.713	Cricetulus_griseus_crigri
ENSLBEG00000021140	-	95	48.062	ENSGAGG00000008589	-	83	51.538	Gopherus_agassizii
ENSLBEG00000021140	-	95	51.938	ENSMMUG00000038493	-	82	52.308	Macaca_mulatta
ENSLBEG00000021140	-	95	50.388	ENSNGAG00000021039	-	82	53.488	Nannospalax_galili
ENSLBEG00000021140	-	65	66.667	ENSNBRG00000001132	-	96	66.667	Neolamprologus_brichardi
ENSLBEG00000021140	-	78	55.140	ENSOANG00000004380	-	82	57.692	Ornithorhynchus_anatinus
ENSLBEG00000021140	-	78	53.774	ENSPSIG00000017141	-	83	55.385	Pelodiscus_sinensis
ENSLBEG00000021140	-	95	65.649	ENSSFOG00015010118	-	82	65.649	Scleropages_formosus
ENSLBEG00000021140	-	95	61.029	ENSSMAG00000021068	-	83	59.854	Scophthalmus_maximus
ENSLBEG00000021140	-	71	68.932	ENSSLDG00000005715	-	90	67.961	Seriola_lalandi_dorsalis
ENSLBEG00000021140	-	78	49.533	ENSUAMG00000012282	-	82	51.938	Ursus_americanus
ENSLBEG00000021140	-	54	63.014	ENSXCOG00000010728	-	63	62.857	Xiphophorus_couchianus