EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000021292 (Gene tree)
Gene ID
109998343
Gene Symbol
lsm3
Alias
-
Full Name
LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
6605 bases
Position
chrFKLU01000479.1:272468-279072
Accession
109998343
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000028107LSMPF01423.223.6e-2011
ENSLBEP00000028089LSMPF01423.221.5e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000029440-297-ENSLBEP0000002810798 (aa)--
ENSLBET00000029421-1537XM_020653138ENSLBEP00000028089139 (aa)XP_020508794-
Gene Model
Click here to download ENSLBEG00000021292's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021292's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000021292lsm38132.927ENSLBEG00000019436snrpd26932.927
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000021292lsm310093.878ENSG00000170860LSM39693.878Homo_sapiens
ENSLBEG00000021292lsm310097.959ENSAPOG00000018947lsm39697.959Acanthochromis_polyacanthus
ENSLBEG00000021292lsm310093.878ENSAMEG00000009405LSM39693.878Ailuropoda_melanoleuca
ENSLBEG00000021292lsm310096.939ENSACIG00000004574lsm36996.939Amphilophus_citrinellus
ENSLBEG00000021292lsm310097.959ENSAOCG00000007658lsm39697.959Amphiprion_ocellaris
ENSLBEG00000021292lsm310097.959ENSAPEG00000018621lsm39697.959Amphiprion_percula
ENSLBEG00000021292lsm310097.959ENSATEG00000005153lsm39697.959Anabas_testudineus
ENSLBEG00000021292lsm39796.842ENSAPLG00000014499LSM310096.842Anas_platyrhynchos
ENSLBEG00000021292lsm310093.878ENSACAG00000013503LSM39693.878Anolis_carolinensis
ENSLBEG00000021292lsm310090.816ENSANAG00000002903-9690.816Aotus_nancymaae
ENSLBEG00000021292lsm310093.878ENSANAG00000034627LSM39693.878Aotus_nancymaae
ENSLBEG00000021292lsm310097.959ENSACLG00000001726-9597.959Astatotilapia_calliptera
ENSLBEG00000021292lsm310095.918ENSAMXG00000041214lsm39695.918Astyanax_mexicanus
ENSLBEG00000021292lsm39895.833ENSBTAG00000007363LSM310095.833Bos_taurus
ENSLBEG00000021292lsm39473.913WBGene00003077lsm-39073.913Caenorhabditis_elegans
ENSLBEG00000021292lsm310091.837ENSCAFG00000001760LSM39691.837Canis_familiaris
ENSLBEG00000021292lsm310085.437ENSCAFG00020020950-9685.437Canis_lupus_dingo
ENSLBEG00000021292lsm310084.694ENSCAFG00020016680-9684.694Canis_lupus_dingo
ENSLBEG00000021292lsm310091.837ENSCAFG00020021584-9691.837Canis_lupus_dingo
ENSLBEG00000021292lsm310090.816ENSCAFG00020026452-9690.816Canis_lupus_dingo
ENSLBEG00000021292lsm310091.837ENSCAFG00020017266-9691.837Canis_lupus_dingo
ENSLBEG00000021292lsm310093.878ENSCHIG00000024650LSM39693.878Capra_hircus
ENSLBEG00000021292lsm39975.258ENSTSYG00000028528-9475.258Carlito_syrichta
ENSLBEG00000021292lsm310094.898ENSTSYG00000005204-9694.898Carlito_syrichta
ENSLBEG00000021292lsm39895.833ENSCAPG00000015760LSM310095.833Cavia_aperea
ENSLBEG00000021292lsm310093.878ENSCPOG00000034071LSM39693.878Cavia_porcellus
ENSLBEG00000021292lsm310093.878ENSCCAG00000019503-9693.878Cebus_capucinus
ENSLBEG00000021292lsm310093.878ENSCCAG00000036499-9693.878Cebus_capucinus
ENSLBEG00000021292lsm310074.490ENSCCAG00000032763-9674.490Cebus_capucinus
ENSLBEG00000021292lsm310093.878ENSCATG00000039421LSM39693.878Cercocebus_atys
ENSLBEG00000021292lsm39974.227ENSCATG00000031630-9574.227Cercocebus_atys
ENSLBEG00000021292lsm310093.878ENSCLAG00000015997LSM39693.878Chinchilla_lanigera
ENSLBEG00000021292lsm310088.776ENSCSAG00000019525-9688.776Chlorocebus_sabaeus
ENSLBEG00000021292lsm310093.878ENSCPBG00000014531LSM39693.878Chrysemys_picta_bellii
ENSLBEG00000021292lsm39980.412ENSCSAVG00000009542-9380.412Ciona_savignyi
ENSLBEG00000021292lsm310090.816ENSCANG00000038037-9690.816Colobus_angolensis_palliatus
ENSLBEG00000021292lsm310090.816ENSCANG00000018782-9690.816Colobus_angolensis_palliatus
ENSLBEG00000021292lsm310093.878ENSCANG00000033944-9693.878Colobus_angolensis_palliatus
ENSLBEG00000021292lsm310093.878ENSCGRG00001017598Lsm39894.845Cricetulus_griseus_chok1gshd
ENSLBEG00000021292lsm39980.412ENSCGRG00001011396-9780.412Cricetulus_griseus_chok1gshd
ENSLBEG00000021292lsm310072.727ENSCGRG00001008639-10072.727Cricetulus_griseus_chok1gshd
ENSLBEG00000021292lsm310093.878ENSCGRG00000016159Lsm39894.845Cricetulus_griseus_crigri
ENSLBEG00000021292lsm39782.105ENSCGRG00000012129-10082.105Cricetulus_griseus_crigri
ENSLBEG00000021292lsm310097.959ENSCSEG00000015071lsm37497.959Cynoglossus_semilaevis
ENSLBEG00000021292lsm310096.939ENSCVAG00000006933lsm39696.939Cyprinodon_variegatus
ENSLBEG00000021292lsm39996.907ENSDARG00000089663lsm39596.907Danio_rerio
ENSLBEG00000021292lsm310093.878ENSDNOG00000030808LSM39693.878Dasypus_novemcinctus
ENSLBEG00000021292lsm310074.490ENSDORG00000024490-9674.490Dipodomys_ordii
ENSLBEG00000021292lsm310093.878ENSDORG00000006894-9693.878Dipodomys_ordii
ENSLBEG00000021292lsm39184.270FBgn0051184LSm38684.270Drosophila_melanogaster
ENSLBEG00000021292lsm310093.878ENSETEG00000016207LSM39693.878Echinops_telfairi
ENSLBEG00000021292lsm39792.632ENSEBUG00000004943lsm39392.632Eptatretus_burgeri
ENSLBEG00000021292lsm310093.878ENSEASG00005015443LSM39693.878Equus_asinus_asinus
ENSLBEG00000021292lsm310093.878ENSECAG00000007803LSM39693.878Equus_caballus
ENSLBEG00000021292lsm310095.918ENSELUG00000018922lsm39695.918Esox_lucius
ENSLBEG00000021292lsm310093.878ENSFCAG00000038453LSM39693.878Felis_catus
ENSLBEG00000021292lsm310070.408ENSFCAG00000044344-9670.408Felis_catus
ENSLBEG00000021292lsm310093.878ENSFALG00000012644LSM39693.878Ficedula_albicollis
ENSLBEG00000021292lsm310093.878ENSFDAG00000011470LSM39693.878Fukomys_damarensis
ENSLBEG00000021292lsm310097.959ENSFHEG00000000876lsm39697.959Fundulus_heteroclitus
ENSLBEG00000021292lsm39797.895ENSGMOG00000011024lsm310097.895Gadus_morhua
ENSLBEG00000021292lsm310097.959ENSGAFG00000013965lsm39697.959Gambusia_affinis
ENSLBEG00000021292lsm310097.959ENSGACG00000003488lsm39697.959Gasterosteus_aculeatus
ENSLBEG00000021292lsm310093.878ENSGAGG00000025707LSM39693.878Gopherus_agassizii
ENSLBEG00000021292lsm310093.878ENSGGOG00000010006LSM39693.878Gorilla_gorilla
ENSLBEG00000021292lsm310097.959ENSHBUG00000022399lsm39697.959Haplochromis_burtoni
ENSLBEG00000021292lsm310093.878ENSHGLG00000000651LSM39693.878Heterocephalus_glaber_female
ENSLBEG00000021292lsm310073.469ENSHGLG00000015564-9573.469Heterocephalus_glaber_female
ENSLBEG00000021292lsm310073.469ENSHGLG00100010658-9573.469Heterocephalus_glaber_male
ENSLBEG00000021292lsm310093.878ENSHGLG00100011343LSM39693.878Heterocephalus_glaber_male
ENSLBEG00000021292lsm310096.939ENSHCOG00000013481lsm39696.939Hippocampus_comes
ENSLBEG00000021292lsm310096.939ENSIPUG00000009207lsm39696.939Ictalurus_punctatus
ENSLBEG00000021292lsm310093.878ENSSTOG00000006842LSM39693.878Ictidomys_tridecemlineatus
ENSLBEG00000021292lsm310093.878ENSJJAG00000017351Lsm39693.878Jaculus_jaculus
ENSLBEG00000021292lsm310085.714ENSJJAG00000012797-9685.714Jaculus_jaculus
ENSLBEG00000021292lsm39972.165ENSJJAG00000018311-9472.165Jaculus_jaculus
ENSLBEG00000021292lsm310096.939ENSKMAG00000015182lsm39696.939Kryptolebias_marmoratus
ENSLBEG00000021292lsm310093.878ENSLOCG00000013560lsm39693.878Lepisosteus_oculatus
ENSLBEG00000021292lsm39994.845ENSLAFG00000023308LSM39494.845Loxodonta_africana
ENSLBEG00000021292lsm310093.878ENSMFAG00000003185LSM39693.878Macaca_fascicularis
ENSLBEG00000021292lsm310073.469ENSMMUG00000043596-9673.469Macaca_mulatta
ENSLBEG00000021292lsm310093.878ENSMMUG00000023126LSM39693.878Macaca_mulatta
ENSLBEG00000021292lsm39975.258ENSMMUG00000002294-9475.258Macaca_mulatta
ENSLBEG00000021292lsm39975.258ENSMNEG00000037686-9575.258Macaca_nemestrina
ENSLBEG00000021292lsm310093.878ENSMNEG00000043632LSM39693.878Macaca_nemestrina
ENSLBEG00000021292lsm310093.878ENSMLEG00000036162LSM39693.878Mandrillus_leucophaeus
ENSLBEG00000021292lsm310097.959ENSMAMG00000012807lsm39697.959Mastacembelus_armatus
ENSLBEG00000021292lsm310097.959ENSMZEG00005016682lsm37197.959Maylandia_zebra
ENSLBEG00000021292lsm39895.833ENSMGAG00000007776LSM310095.833Meleagris_gallopavo
ENSLBEG00000021292lsm310093.878ENSMICG00000032361-9693.878Microcebus_murinus
ENSLBEG00000021292lsm310080.612ENSMICG00000027821-9680.612Microcebus_murinus
ENSLBEG00000021292lsm310093.878ENSMOCG00000014269Lsm39693.878Microtus_ochrogaster
ENSLBEG00000021292lsm310096.939ENSMMOG00000020715lsm39696.939Mola_mola
ENSLBEG00000021292lsm39994.845ENSMODG00000007275LSM39894.845Monodelphis_domestica
ENSLBEG00000021292lsm310097.959ENSMALG00000006485lsm39697.959Monopterus_albus
ENSLBEG00000021292lsm310093.878ENSMUSG00000034192Lsm39693.878Mus_musculus
ENSLBEG00000021292lsm310093.878MGP_PahariEiJ_G0022402Lsm39693.878Mus_pahari
ENSLBEG00000021292lsm310093.878MGP_SPRETEiJ_G0029681Lsm39693.878Mus_spretus
ENSLBEG00000021292lsm39782.105ENSMPUG00000019120-9382.105Mustela_putorius_furo
ENSLBEG00000021292lsm38385.185ENSMPUG00000017256-10087.059Mustela_putorius_furo
ENSLBEG00000021292lsm310089.796ENSMLUG00000024700-9689.796Myotis_lucifugus
ENSLBEG00000021292lsm310093.878ENSMLUG00000010677LSM39693.878Myotis_lucifugus
ENSLBEG00000021292lsm310093.878ENSNGAG00000022450Lsm39693.878Nannospalax_galili
ENSLBEG00000021292lsm39776.842ENSNGAG00000010207-8984.706Nannospalax_galili
ENSLBEG00000021292lsm39970.103ENSNGAG00000013716-9470.103Nannospalax_galili
ENSLBEG00000021292lsm310097.959ENSNBRG00000014318lsm39697.959Neolamprologus_brichardi
ENSLBEG00000021292lsm310084.694ENSNLEG00000030229-9684.694Nomascus_leucogenys
ENSLBEG00000021292lsm310093.878ENSNLEG00000005079LSM39693.878Nomascus_leucogenys
ENSLBEG00000021292lsm310087.755ENSODEG00000019403-9687.755Octodon_degus
ENSLBEG00000021292lsm310093.878ENSODEG00000001726LSM39693.878Octodon_degus
ENSLBEG00000021292lsm310092.857ENSODEG00000019740-9692.857Octodon_degus
ENSLBEG00000021292lsm310091.837ENSODEG00000019158-9691.837Octodon_degus
ENSLBEG00000021292lsm310097.959ENSONIG00000021369-9697.959Oreochromis_niloticus
ENSLBEG00000021292lsm310097.959ENSONIG00000000370lsm39697.959Oreochromis_niloticus
ENSLBEG00000021292lsm39994.845ENSOANG00000012273LSM39594.845Ornithorhynchus_anatinus
ENSLBEG00000021292lsm310093.878ENSOCUG00000027653-9693.878Oryctolagus_cuniculus
ENSLBEG00000021292lsm39297.778ENSOCUG00000011088-8897.778Oryctolagus_cuniculus
ENSLBEG00000021292lsm39997.938ENSORLG00000025900lsm39597.938Oryzias_latipes
ENSLBEG00000021292lsm39997.938ENSORLG00020007125lsm39597.938Oryzias_latipes_hni
ENSLBEG00000021292lsm39997.938ENSORLG00015002944lsm39597.938Oryzias_latipes_hsok
ENSLBEG00000021292lsm39997.938ENSOMEG00000001915lsm39597.938Oryzias_melastigma
ENSLBEG00000021292lsm310084.694ENSOGAG00000033051-9684.694Otolemur_garnettii
ENSLBEG00000021292lsm39993.814ENSOGAG00000028858-9993.814Otolemur_garnettii
ENSLBEG00000021292lsm310093.878ENSOGAG00000007659-9693.878Otolemur_garnettii
ENSLBEG00000021292lsm39994.845ENSOARG00000000600LSM39494.845Ovis_aries
ENSLBEG00000021292lsm310093.878ENSPPAG00000034074LSM39693.878Pan_paniscus
ENSLBEG00000021292lsm310092.857ENSPPRG00000020953-9692.857Panthera_pardus
ENSLBEG00000021292lsm310093.878ENSPPRG00000012912-9693.878Panthera_pardus
ENSLBEG00000021292lsm310087.755ENSPPRG00000010610-8687.755Panthera_pardus
ENSLBEG00000021292lsm310093.878ENSPTIG00000013072-9693.878Panthera_tigris_altaica
ENSLBEG00000021292lsm310093.878ENSPTIG00000003463-9693.878Panthera_tigris_altaica
ENSLBEG00000021292lsm310093.878ENSPTRG00000014650LSM39693.878Pan_troglodytes
ENSLBEG00000021292lsm310093.878ENSPANG00000009378LSM39693.878Papio_anubis
ENSLBEG00000021292lsm310073.469ENSPANG00000032192-9673.469Papio_anubis
ENSLBEG00000021292lsm310094.898ENSPKIG00000008037lsm38894.898Paramormyrops_kingsleyae
ENSLBEG00000021292lsm310093.878ENSPSIG00000015720LSM39693.878Pelodiscus_sinensis
ENSLBEG00000021292lsm39995.876ENSPMGG00000012103lsm39895.876Periophthalmus_magnuspinnatus
ENSLBEG00000021292lsm310077.551ENSPEMG00000020213-9677.551Peromyscus_maniculatus_bairdii
ENSLBEG00000021292lsm310093.878ENSPEMG00000015797Lsm39693.878Peromyscus_maniculatus_bairdii
ENSLBEG00000021292lsm310097.959ENSPFOG00000008372lsm39697.959Poecilia_formosa
ENSLBEG00000021292lsm310097.959ENSPLAG00000000563lsm39697.959Poecilia_latipinna
ENSLBEG00000021292lsm310098.980ENSPMEG00000022052lsm39697.959Poecilia_mexicana
ENSLBEG00000021292lsm310097.959ENSPREG00000022485lsm39697.959Poecilia_reticulata
ENSLBEG00000021292lsm310093.878ENSPPYG00000013402LSM39693.878Pongo_abelii
ENSLBEG00000021292lsm310093.878ENSPCAG00000017077LSM39693.878Procavia_capensis
ENSLBEG00000021292lsm39473.913ENSPCOG00000014435-9373.913Propithecus_coquereli
ENSLBEG00000021292lsm310093.878ENSPCOG00000016217-9693.878Propithecus_coquereli
ENSLBEG00000021292lsm310093.878ENSPVAG00000016795LSM39693.878Pteropus_vampyrus
ENSLBEG00000021292lsm310097.959ENSPNYG00000009552lsm37197.959Pundamilia_nyererei
ENSLBEG00000021292lsm310095.918ENSPNAG00000023467lsm39695.918Pygocentrus_nattereri
ENSLBEG00000021292lsm310093.878ENSRNOG00000008733Lsm39693.878Rattus_norvegicus
ENSLBEG00000021292lsm310077.551ENSRBIG00000043783-9677.551Rhinopithecus_bieti
ENSLBEG00000021292lsm310093.878ENSRBIG00000034399LSM39693.878Rhinopithecus_bieti
ENSLBEG00000021292lsm310082.653ENSRROG00000044047-9682.653Rhinopithecus_roxellana
ENSLBEG00000021292lsm310093.878ENSRROG00000033276-9693.878Rhinopithecus_roxellana
ENSLBEG00000021292lsm310076.531ENSRROG00000044056-9676.531Rhinopithecus_roxellana
ENSLBEG00000021292lsm310078.571ENSRROG00000039868-9678.571Rhinopithecus_roxellana
ENSLBEG00000021292lsm310093.878ENSSBOG00000024310LSM39693.878Saimiri_boliviensis_boliviensis
ENSLBEG00000021292lsm310095.918ENSSFOG00015007071lsm39695.918Scleropages_formosus
ENSLBEG00000021292lsm310097.959ENSSMAG00000001818lsm39697.959Scophthalmus_maximus
ENSLBEG00000021292lsm310097.959ENSSDUG00000006040lsm39697.959Seriola_dumerili
ENSLBEG00000021292lsm310097.959ENSSLDG00000006399lsm39697.959Seriola_lalandi_dorsalis
ENSLBEG00000021292lsm35996.552ENSSARG00000005275-10096.552Sorex_araneus
ENSLBEG00000021292lsm310084.694ENSSPUG00000005394LSM39684.694Sphenodon_punctatus
ENSLBEG00000021292lsm39796.842ENSSPUG00000017047-9996.842Sphenodon_punctatus
ENSLBEG00000021292lsm310084.694ENSSPAG00000000934lsm39684.694Stegastes_partitus
ENSLBEG00000021292lsm39569.892ENSSSCG00000023718-9569.892Sus_scrofa
ENSLBEG00000021292lsm310093.878ENSSSCG00000011601LSM39693.878Sus_scrofa
ENSLBEG00000021292lsm310093.878ENSTGUG00000008327LSM39693.878Taeniopygia_guttata
ENSLBEG00000021292lsm310096.939ENSTRUG00000023175lsm39696.939Takifugu_rubripes
ENSLBEG00000021292lsm310096.939ENSTNIG00000005589lsm39696.939Tetraodon_nigroviridis
ENSLBEG00000021292lsm310083.673ENSTBEG00000001050-9583.673Tupaia_belangeri
ENSLBEG00000021292lsm310093.878ENSTTRG00000011197LSM39693.878Tursiops_truncatus
ENSLBEG00000021292lsm310093.878ENSUAMG00000017250-9693.878Ursus_americanus
ENSLBEG00000021292lsm310093.878ENSUMAG00000015905LSM39693.878Ursus_maritimus
ENSLBEG00000021292lsm39796.842ENSVPAG00000010709LSM310096.842Vicugna_pacos
ENSLBEG00000021292lsm310090.816ENSVVUG00000007332-8890.816Vulpes_vulpes
ENSLBEG00000021292lsm310085.714ENSVVUG00000024228-9685.714Vulpes_vulpes
ENSLBEG00000021292lsm310091.837ENSVVUG00000029294-9691.837Vulpes_vulpes
ENSLBEG00000021292lsm310089.796ENSVVUG00000005684-9689.796Vulpes_vulpes
ENSLBEG00000021292lsm310088.776ENSVVUG00000006481-9688.776Vulpes_vulpes
ENSLBEG00000021292lsm39995.876ENSXETG00000011534lsm39595.876Xenopus_tropicalis
ENSLBEG00000021292lsm310097.959ENSXCOG00000017432LSM39697.959Xiphophorus_couchianus
ENSLBEG00000021292lsm310097.959ENSXMAG00000009151lsm39697.959Xiphophorus_maculatus

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